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Towards crystal structure prediction of complex organic compounds--a report on the fifth blind test.

Publication ,  Journal Article
Bardwell, DA; Adjiman, CS; Arnautova, YA; Bartashevich, E; Boerrigter, SXM; Braun, DE; Cruz-Cabeza, AJ; Day, GM; Della Valle, RG; Desiraju, GR ...
Published in: Acta Crystallogr B
December 2011

Following on from the success of the previous crystal structure prediction blind tests (CSP1999, CSP2001, CSP2004 and CSP2007), a fifth such collaborative project (CSP2010) was organized at the Cambridge Crystallographic Data Centre. A range of methodologies was used by the participating groups in order to evaluate the ability of the current computational methods to predict the crystal structures of the six organic molecules chosen as targets for this blind test. The first four targets, two rigid molecules, one semi-flexible molecule and a 1:1 salt, matched the criteria for the targets from CSP2007, while the last two targets belonged to two new challenging categories - a larger, much more flexible molecule and a hydrate with more than one polymorph. Each group submitted three predictions for each target it attempted. There was at least one successful prediction for each target, and two groups were able to successfully predict the structure of the large flexible molecule as their first place submission. The results show that while not as many groups successfully predicted the structures of the three smallest molecules as in CSP2007, there is now evidence that methodologies such as dispersion-corrected density functional theory (DFT-D) are able to reliably do so. The results also highlight the many challenges posed by more complex systems and show that there are still issues to be overcome.

Duke Scholars

Published In

Acta Crystallogr B

DOI

EISSN

1600-5740

Publication Date

December 2011

Volume

67

Issue

Pt 6

Start / End Page

535 / 551

Location

United States

Related Subject Headings

  • Organic Chemicals
  • Models, Molecular
  • Inorganic & Nuclear Chemistry
  • Databases, Factual
  • Crystallography, X-Ray
  • 3406 Physical chemistry
  • 3402 Inorganic chemistry
  • 0912 Materials Engineering
  • 0306 Physical Chemistry (incl. Structural)
  • 0301 Analytical Chemistry
 

Citation

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Bardwell, D. A., Adjiman, C. S., Arnautova, Y. A., Bartashevich, E., Boerrigter, S. X. M., Braun, D. E., … Zhitkov, I. K. (2011). Towards crystal structure prediction of complex organic compounds--a report on the fifth blind test. Acta Crystallogr B, 67(Pt 6), 535–551. https://doi.org/10.1107/S0108768111042868
Bardwell, David A., Claire S. Adjiman, Yelena A. Arnautova, Ekaterina Bartashevich, Stephan X. M. Boerrigter, Doris E. Braun, Aurora J. Cruz-Cabeza, et al. “Towards crystal structure prediction of complex organic compounds--a report on the fifth blind test.Acta Crystallogr B 67, no. Pt 6 (December 2011): 535–51. https://doi.org/10.1107/S0108768111042868.
Bardwell DA, Adjiman CS, Arnautova YA, Bartashevich E, Boerrigter SXM, Braun DE, et al. Towards crystal structure prediction of complex organic compounds--a report on the fifth blind test. Acta Crystallogr B. 2011 Dec;67(Pt 6):535–51.
Bardwell, David A., et al. “Towards crystal structure prediction of complex organic compounds--a report on the fifth blind test.Acta Crystallogr B, vol. 67, no. Pt 6, Dec. 2011, pp. 535–51. Pubmed, doi:10.1107/S0108768111042868.
Bardwell DA, Adjiman CS, Arnautova YA, Bartashevich E, Boerrigter SXM, Braun DE, Cruz-Cabeza AJ, Day GM, Della Valle RG, Desiraju GR, van Eijck BP, Facelli JC, Ferraro MB, Grillo D, Habgood M, Hofmann DWM, Hofmann F, Jose KVJ, Karamertzanis PG, Kazantsev AV, Kendrick J, Kuleshova LN, Leusen FJJ, Maleev AV, Misquitta AJ, Mohamed S, Needs RJ, Neumann MA, Nikylov D, Orendt AM, Pal R, Pantelides CC, Pickard CJ, Price LS, Price SL, Scheraga HA, van de Streek J, Thakur TS, Tiwari S, Venuti E, Zhitkov IK. Towards crystal structure prediction of complex organic compounds--a report on the fifth blind test. Acta Crystallogr B. 2011 Dec;67(Pt 6):535–551.
Journal cover image

Published In

Acta Crystallogr B

DOI

EISSN

1600-5740

Publication Date

December 2011

Volume

67

Issue

Pt 6

Start / End Page

535 / 551

Location

United States

Related Subject Headings

  • Organic Chemicals
  • Models, Molecular
  • Inorganic & Nuclear Chemistry
  • Databases, Factual
  • Crystallography, X-Ray
  • 3406 Physical chemistry
  • 3402 Inorganic chemistry
  • 0912 Materials Engineering
  • 0306 Physical Chemistry (incl. Structural)
  • 0301 Analytical Chemistry