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Spike count analysis for multiplexing inference (SCAMPI).

Publication ,  Journal Article
Chen, Y; Groh, JM; Tokdar, S
Published in: Journal of computational neuroscience
March 2026

Understanding how neurons encode multiple simultaneous stimuli is a fundamental question in neuroscience. We have previously introduced a novel theory of stochastic encoding patterns wherein a neuron's spiking activity dynamically switches among its constituent single-stimulus activity patterns when presented with multiple stimuli (Groh et al., 2024). Here, we present an enhanced, comprehensive statistical testing framework for such "multiplexing". As before, our approach evaluates whether dual-stimulus responses can be accounted for as mixtures of Poissons related to single-stimulus benchmarks. Our enhanced framework improves upon previous methods in two key ways. First, it introduces a stronger set of foils for multiplexing, including an "overreaching" category that captures overdispersed activity patterns unrelated to the single-stimulus benchmarks, reducing false detection of multiplexing. Second, it detects continuous mixtures, potentially indicating faster fluctuations - i.e. at sub-trial timescales - that would have been overlooked before. We utilize a Bayesian inference framework, considering the hypothesis with the highest posterior probability as the winner, and employ the predictive recursion marginal likelihood method for non-parametric estimation of the latent mixing distributions. Reanalysis of previous findings confirms the general observation of fluctuating activity and indicates that fluctuations may well occur on faster timescales than previously suggested. We further confirm that multiplexing is more prevalent for (a) combinations of face stimuli than for faces and non-face objects in the inferotemporal face patch system; and (b) distinct vs fused objects in the primary visual cortex.

Duke Scholars

Published In

Journal of computational neuroscience

DOI

EISSN

1573-6873

ISSN

0929-5313

Publication Date

March 2026

Volume

54

Issue

1

Start / End Page

67 / 96

Related Subject Headings

  • Visual Cortex
  • Neurons
  • Neurology & Neurosurgery
  • Models, Neurological
  • Humans
  • Bayes Theorem
  • Animals
  • Action Potentials
  • 52 Psychology
  • 46 Information and computing sciences
 

Citation

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MLA
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Chen, Y., Groh, J. M., & Tokdar, S. (2026). Spike count analysis for multiplexing inference (SCAMPI). Journal of Computational Neuroscience, 54(1), 67–96. https://doi.org/10.1007/s10827-025-00918-1
Chen, Yunran, Jennifer M. Groh, and Surya Tokdar. “Spike count analysis for multiplexing inference (SCAMPI).Journal of Computational Neuroscience 54, no. 1 (March 2026): 67–96. https://doi.org/10.1007/s10827-025-00918-1.
Chen Y, Groh JM, Tokdar S. Spike count analysis for multiplexing inference (SCAMPI). Journal of computational neuroscience. 2026 Mar;54(1):67–96.
Chen, Yunran, et al. “Spike count analysis for multiplexing inference (SCAMPI).Journal of Computational Neuroscience, vol. 54, no. 1, Mar. 2026, pp. 67–96. Epmc, doi:10.1007/s10827-025-00918-1.
Chen Y, Groh JM, Tokdar S. Spike count analysis for multiplexing inference (SCAMPI). Journal of computational neuroscience. 2026 Mar;54(1):67–96.
Journal cover image

Published In

Journal of computational neuroscience

DOI

EISSN

1573-6873

ISSN

0929-5313

Publication Date

March 2026

Volume

54

Issue

1

Start / End Page

67 / 96

Related Subject Headings

  • Visual Cortex
  • Neurons
  • Neurology & Neurosurgery
  • Models, Neurological
  • Humans
  • Bayes Theorem
  • Animals
  • Action Potentials
  • 52 Psychology
  • 46 Information and computing sciences