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Reduced order dynamic model for polysaccharides molecule attached to an atomic force microscope

Publication ,  Journal Article
Tang, D; Li, A; Attar, P; Dowell, EH
Published in: Journal of Computational Physics
December 10, 2004

A dynamic analysis and numerical simulation has been conducted of a polysaccharides molecular structure (a ten (10) single-α-D-glucose molecule chain) connected to a moving atomic force microscope (AFM). Sinusoidal base excitation of the AFM cantilevered beam is considered. First a linearized perturbation model is constructed for the complex polysaccharides molecular structure. Then reduced order (dynamic) models based upon a proper orthogonal decomposition (POD) technique are constructed using global modes for both the linearized perturbation model and for the full nonlinear model. The agreement between the original and reduced order models (ROM/POD) is very good even when only a few global modes are included in the ROM for either the linear case or for the nonlinear case. The computational advantage of the reduced order model is clear from the results presented. © 2004 Elsevier Inc. All rights reserved.

Duke Scholars

Published In

Journal of Computational Physics

DOI

ISSN

0021-9991

Publication Date

December 10, 2004

Volume

201

Issue

2

Start / End Page

723 / 752

Related Subject Headings

  • Applied Mathematics
  • 51 Physical sciences
  • 49 Mathematical sciences
  • 40 Engineering
  • 09 Engineering
  • 02 Physical Sciences
  • 01 Mathematical Sciences
 

Citation

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Tang, D., Li, A., Attar, P., & Dowell, E. H. (2004). Reduced order dynamic model for polysaccharides molecule attached to an atomic force microscope. Journal of Computational Physics, 201(2), 723–752. https://doi.org/10.1016/j.jcp.2004.06.016
Tang, D., A. Li, P. Attar, and E. H. Dowell. “Reduced order dynamic model for polysaccharides molecule attached to an atomic force microscope.” Journal of Computational Physics 201, no. 2 (December 10, 2004): 723–52. https://doi.org/10.1016/j.jcp.2004.06.016.
Tang D, Li A, Attar P, Dowell EH. Reduced order dynamic model for polysaccharides molecule attached to an atomic force microscope. Journal of Computational Physics. 2004 Dec 10;201(2):723–52.
Tang, D., et al. “Reduced order dynamic model for polysaccharides molecule attached to an atomic force microscope.” Journal of Computational Physics, vol. 201, no. 2, Dec. 2004, pp. 723–52. Scopus, doi:10.1016/j.jcp.2004.06.016.
Tang D, Li A, Attar P, Dowell EH. Reduced order dynamic model for polysaccharides molecule attached to an atomic force microscope. Journal of Computational Physics. 2004 Dec 10;201(2):723–752.
Journal cover image

Published In

Journal of Computational Physics

DOI

ISSN

0021-9991

Publication Date

December 10, 2004

Volume

201

Issue

2

Start / End Page

723 / 752

Related Subject Headings

  • Applied Mathematics
  • 51 Physical sciences
  • 49 Mathematical sciences
  • 40 Engineering
  • 09 Engineering
  • 02 Physical Sciences
  • 01 Mathematical Sciences