Skip to main content
Journal cover image

Evidence from opsin genes rejects nocturnality in ancestral primates.

Publication ,  Journal Article
Tan, Y; Yoder, AD; Yamashita, N; Li, W-H
Published in: Proceedings of the National Academy of Sciences of the United States of America
October 2005

It is firmly believed that ancestral primates were nocturnal, with nocturnality having been maintained in most prosimian lineages. Under this traditional view, the opsin genes in all nocturnal prosimians should have undergone similar degrees of functional relaxation and accumulated similar extents of deleterious mutations. This expectation is rejected by the short-wavelength (S) opsin gene sequences from 14 representative prosimians. We found severe defects of the S opsin gene only in lorisiforms, but no defect in five nocturnal and two diurnal lemur species and only minor defects in two tarsiers and two nocturnal lemurs. Further, the nonsynonymous-to-synonymous rate ratio of the S opsin gene is highest in the lorisiforms and varies among the other prosimian branches, indicating different time periods of functional relaxation among lineages. These observations suggest that the ancestral primates were diurnal or cathemeral and that nocturnality has evolved several times in the prosimians, first in the lorisiforms but much later in other lineages. This view is further supported by the distribution pattern of the middle-wavelength (M) and long-wavelength (L) opsin genes among prosimians.

Duke Scholars

Published In

Proceedings of the National Academy of Sciences of the United States of America

DOI

EISSN

1091-6490

ISSN

0027-8424

Publication Date

October 2005

Volume

102

Issue

41

Start / End Page

14712 / 14716

Related Subject Headings

  • Species Specificity
  • Sequence Analysis, DNA
  • Rod Opsins
  • Primates
  • Phylogeny
  • Mutation
  • Molecular Sequence Data
  • Genetic Variation
  • Darkness
  • Cluster Analysis
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Tan, Y., Yoder, A. D., Yamashita, N., & Li, W.-H. (2005). Evidence from opsin genes rejects nocturnality in ancestral primates. Proceedings of the National Academy of Sciences of the United States of America, 102(41), 14712–14716. https://doi.org/10.1073/pnas.0507042102
Tan, Ying, Anne D. Yoder, Nayuta Yamashita, and Wen-Hsiung Li. “Evidence from opsin genes rejects nocturnality in ancestral primates.Proceedings of the National Academy of Sciences of the United States of America 102, no. 41 (October 2005): 14712–16. https://doi.org/10.1073/pnas.0507042102.
Tan Y, Yoder AD, Yamashita N, Li W-H. Evidence from opsin genes rejects nocturnality in ancestral primates. Proceedings of the National Academy of Sciences of the United States of America. 2005 Oct;102(41):14712–6.
Tan, Ying, et al. “Evidence from opsin genes rejects nocturnality in ancestral primates.Proceedings of the National Academy of Sciences of the United States of America, vol. 102, no. 41, Oct. 2005, pp. 14712–16. Epmc, doi:10.1073/pnas.0507042102.
Tan Y, Yoder AD, Yamashita N, Li W-H. Evidence from opsin genes rejects nocturnality in ancestral primates. Proceedings of the National Academy of Sciences of the United States of America. 2005 Oct;102(41):14712–14716.
Journal cover image

Published In

Proceedings of the National Academy of Sciences of the United States of America

DOI

EISSN

1091-6490

ISSN

0027-8424

Publication Date

October 2005

Volume

102

Issue

41

Start / End Page

14712 / 14716

Related Subject Headings

  • Species Specificity
  • Sequence Analysis, DNA
  • Rod Opsins
  • Primates
  • Phylogeny
  • Mutation
  • Molecular Sequence Data
  • Genetic Variation
  • Darkness
  • Cluster Analysis