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The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations.

Publication ,  Journal Article
Devaney, JM; Thompson, PD; Visich, PS; Saltarelli, WA; Gordon, PM; Orkunoglu-Suer, EF; Gordish-Dressman, H; Harmon, BT; Bradbury, MK; Khianey, R ...
Published in: Pediatr Res
June 2011

Genome-wide association studies (GWASs) have identified polymorphic loci associated with coronary artery disease (CAD) risk factors (i.e. serum lipids) in adult populations (42-69 y). We hypothesized that younger populations would show a greater relative genetic component due to fewer confounding variables. We examined the influence of 20 GWAS loci associated with serum lipids and insulin metabolism, in a university student cohort (n = 548; mean age = 24 y), and replicated statistically associated results in a second study cohort of primary school students (n = 810, mean age = 11.5 y). Nineteen loci showed no relationship with studied risk factors in young adults. However, the ancestral allele of the rs646776 (SORT1) locus was strongly associated with increased LDL (C) in young adults [TT: 97.6 ± 1.0 mg/dL (n = 345) versus CT/CC: 87.3 ± 1.0 mg/dL (n = 203); p = 3 × 10(x6)] and children [TT: 94.0 ± 1.3 mg/dL (n = 551) versus CT/CC: 84.7 ± 1.4 mg/dL (n = 259); p = 4 × 10(x6)]. This locus is responsible for 3.6% of population variance in young adults and 2.5% of population variance in children. The effect size of the SORT1 locus is considerably higher in young populations (2.5-4.1%) compared with older subjects (1%).

Duke Scholars

Published In

Pediatr Res

DOI

EISSN

1530-0447

Publication Date

June 2011

Volume

69

Issue

6

Start / End Page

538 / 543

Location

United States

Related Subject Headings

  • Young Adult
  • Risk Factors
  • Polymorphism, Single Nucleotide
  • Pediatrics
  • Lipids
  • Insulin
  • Humans
  • Genotype
  • Genome-Wide Association Study
  • Female
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Devaney, J. M., Thompson, P. D., Visich, P. S., Saltarelli, W. A., Gordon, P. M., Orkunoglu-Suer, E. F., … Hoffman, E. P. (2011). The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations. Pediatr Res, 69(6), 538–543. https://doi.org/10.1203/PDR.0b013e3182139227
Devaney, Joseph M., Paul D. Thompson, Paul S. Visich, William A. Saltarelli, Paul M. Gordon, E Funda Orkunoglu-Suer, Heather Gordish-Dressman, et al. “The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations.Pediatr Res 69, no. 6 (June 2011): 538–43. https://doi.org/10.1203/PDR.0b013e3182139227.
Devaney JM, Thompson PD, Visich PS, Saltarelli WA, Gordon PM, Orkunoglu-Suer EF, et al. The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations. Pediatr Res. 2011 Jun;69(6):538–43.
Devaney, Joseph M., et al. “The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations.Pediatr Res, vol. 69, no. 6, June 2011, pp. 538–43. Pubmed, doi:10.1203/PDR.0b013e3182139227.
Devaney JM, Thompson PD, Visich PS, Saltarelli WA, Gordon PM, Orkunoglu-Suer EF, Gordish-Dressman H, Harmon BT, Bradbury MK, Panchapakesan K, Khianey R, Hubal MJ, Clarkson PM, Pescatello LS, Zoeller RF, Moyna NM, Angelopoulos TJ, Kraus WE, Hoffman EP. The 1p13.3 LDL (C)-associated locus shows large effect sizes in young populations. Pediatr Res. 2011 Jun;69(6):538–543.

Published In

Pediatr Res

DOI

EISSN

1530-0447

Publication Date

June 2011

Volume

69

Issue

6

Start / End Page

538 / 543

Location

United States

Related Subject Headings

  • Young Adult
  • Risk Factors
  • Polymorphism, Single Nucleotide
  • Pediatrics
  • Lipids
  • Insulin
  • Humans
  • Genotype
  • Genome-Wide Association Study
  • Female