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Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions.

Publication ,  Journal Article
Hughes, KW; Petersen, RH; Johnson, JE; Moncalvo, JM; Vilgalys, R; Redhead, SA; Thomas, T; McGhee, LL
Published in: Mycological research.
February 2001

Collybia, as understood by Antonin & Noordeloos, comprises four species: C. racemosa, C. tuberosa, C. cirrhata and C. cookei. Collybia tuberosa, C. cirrhata and C. cookei are morphologically similar and are primarily distinguished from each other by the presence or absence and the colour of sclerotia. All four share a common and unique habitat. Phylogenetic reconstructions using DNA sequences of the ribosomal ITS1–5.8S–ITS2 support four distinct clades, each corresponding to a morphological species, with the C. tuberosa, C. cirrhata and C. cookei clades forming a larger group. Analyses of ribosomal Large Subunit DNA sequences confirmed that Collybia tuberosa, C. cirrhata and C. cookei formed a monophyletic group. In both analyses, the C. racemosa sequence was highly divergent from those of the other three species of the complex and we propose a separate genus name, Dendrocollybia, for this species. Simple diagnostic RFLP patterns were identified for the four species and were used to validate morphological designations and distributions.

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Published In

Mycological research.

DOI

EISSN

1469-8102

ISSN

0953-7562

Publication Date

February 2001

Volume

105

Issue

2

Start / End Page

164 / 172

Related Subject Headings

  • Mycology & Parasitology
  • 3108 Plant biology
  • 3107 Microbiology
  • 0607 Plant Biology
  • 0605 Microbiology
 

Citation

APA
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ICMJE
MLA
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Hughes, K. W., Petersen, R. H., Johnson, J. E., Moncalvo, J. M., Vilgalys, R., Redhead, S. A., … McGhee, L. L. (2001). Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions. Mycological Research., 105(2), 164–172. https://doi.org/10.1017/s0953756200003415
Hughes, K. W., R. H. Petersen, J. E. Johnson, J. M. Moncalvo, R. Vilgalys, S. A. Redhead, T. Thomas, and L. L. McGhee. “Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions.Mycological Research. 105, no. 2 (February 2001): 164–72. https://doi.org/10.1017/s0953756200003415.
Hughes KW, Petersen RH, Johnson JE, Moncalvo JM, Vilgalys R, Redhead SA, et al. Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions. Mycological research. 2001 Feb;105(2):164–72.
Hughes, K. W., et al. “Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions.Mycological Research., vol. 105, no. 2, Feb. 2001, pp. 164–72. Epmc, doi:10.1017/s0953756200003415.
Hughes KW, Petersen RH, Johnson JE, Moncalvo JM, Vilgalys R, Redhead SA, Thomas T, McGhee LL. Infragenic phylogeny of Collybia s. str. based on sequences of ribosomal ITS and LSU regions. Mycological research. 2001 Feb;105(2):164–172.

Published In

Mycological research.

DOI

EISSN

1469-8102

ISSN

0953-7562

Publication Date

February 2001

Volume

105

Issue

2

Start / End Page

164 / 172

Related Subject Headings

  • Mycology & Parasitology
  • 3108 Plant biology
  • 3107 Microbiology
  • 0607 Plant Biology
  • 0605 Microbiology