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Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe).

Publication ,  Journal Article
Sobrin, L; Green, T; Sim, X; Jensen, RA; Tai, ES; Tay, WT; Wang, JJ; Mitchell, P; Sandholm, N; Liu, Y; Hietala, K; Iyengar, SK; Brooks, M ...
Published in: Invest Ophthalmol Vis Sci
September 29, 2011

PURPOSE: To investigate whether variants in cardiovascular candidate genes, some of which have been previously associated with type 2 diabetes (T2D), diabetic retinopathy (DR), and diabetic nephropathy (DN), are associated with DR in the Candidate gene Association Resource (CARe). METHODS: Persons with T2D who were enrolled in the study (n = 2691) had fundus photography and genotyping of single nucleotide polymorphisms (SNPs) in 2000 candidate genes. Two case definitions were investigated: Early Treatment Diabetic Retinopathy Study (ETDRS) grades ≥ 14 and ≥ 30. The χ² analyses for each CARe cohort were combined by Cochran-Mantel-Haenszel (CMH) pooling of odds ratios (ORs) and corrected for multiple hypothesis testing. Logistic regression was performed with adjustment for other DR risk factors. Results from replication in independent cohorts were analyzed with CMH meta-analysis methods. RESULTS: Among 39 genes previously associated with DR, DN, or T2D, three SNPs in P-selectin (SELP) were associated with DR. The strongest association was to rs6128 (OR = 0.43, P = 0.0001, after Bonferroni correction). These associations remained significant after adjustment for DR risk factors. Among other genes examined, several variants were associated with DR with significant P values, including rs6856425 tagging α-l-iduronidase (IDUA) (P = 2.1 × 10(-5), after Bonferroni correction). However, replication in independent cohorts did not reveal study-wide significant effects. The P values after replication were 0.55 and 0.10 for rs6128 and rs6856425, respectively. CONCLUSIONS: Genes associated with DN, T2D, and vascular diseases do not appear to be consistently associated with DR. A few genetic variants associated with DR, particularly those in SELP and near IDUA, should be investigated in additional DR cohorts.

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Published In

Invest Ophthalmol Vis Sci

DOI

EISSN

1552-5783

Publication Date

September 29, 2011

Volume

52

Issue

10

Start / End Page

7593 / 7602

Location

United States

Related Subject Headings

  • Risk Factors
  • Polymorphism, Single Nucleotide
  • P-Selectin
  • Ophthalmology & Optometry
  • Odds Ratio
  • Iduronidase
  • Humans
  • Genotype
  • Genome-Wide Association Study
  • Genetic Predisposition to Disease
 

Citation

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Sobrin, L., Green, T., Sim, X., Jensen, R. A., Tai, E. S., Tay, W. T., … Wong, T. Y. (2011). Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe). Invest Ophthalmol Vis Sci, 52(10), 7593–7602. https://doi.org/10.1167/iovs.11-7510
Sobrin, Lucia, Todd Green, Xueling Sim, Richard A. Jensen, E Shyong Tai, Wan Ting Tay, Jie Jin Wang, et al. “Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe).Invest Ophthalmol Vis Sci 52, no. 10 (September 29, 2011): 7593–7602. https://doi.org/10.1167/iovs.11-7510.
Sobrin L, Green T, Sim X, Jensen RA, Tai ES, Tay WT, et al. Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe). Invest Ophthalmol Vis Sci. 2011 Sep 29;52(10):7593–602.
Sobrin, Lucia, et al. “Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe).Invest Ophthalmol Vis Sci, vol. 52, no. 10, Sept. 2011, pp. 7593–602. Pubmed, doi:10.1167/iovs.11-7510.
Sobrin L, Green T, Sim X, Jensen RA, Tai ES, Tay WT, Wang JJ, Mitchell P, Sandholm N, Liu Y, Hietala K, Iyengar SK, Family Investigation of Nephropathy and Diabetes-Eye Research Group, Brooks M, Buraczynska M, Van Zuydam N, Smith AV, Gudnason V, Doney ASF, Morris AD, Leese GP, Palmer CNA, Wellcome Trust Case Control Consortium 2, Swaroop A, Taylor HA, Wilson JG, Penman A, Chen CJ, Groop P-H, Saw S-M, Aung T, Klein BE, Rotter JI, Siscovick DS, Cotch MF, Klein R, Daly MJ, Wong TY. Candidate gene association study for diabetic retinopathy in persons with type 2 diabetes: the Candidate gene Association Resource (CARe). Invest Ophthalmol Vis Sci. 2011 Sep 29;52(10):7593–7602.

Published In

Invest Ophthalmol Vis Sci

DOI

EISSN

1552-5783

Publication Date

September 29, 2011

Volume

52

Issue

10

Start / End Page

7593 / 7602

Location

United States

Related Subject Headings

  • Risk Factors
  • Polymorphism, Single Nucleotide
  • P-Selectin
  • Ophthalmology & Optometry
  • Odds Ratio
  • Iduronidase
  • Humans
  • Genotype
  • Genome-Wide Association Study
  • Genetic Predisposition to Disease