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Jichun Xie

Associate Professor of Biostatistics & Bioinformatics
Biostatistics & Bioinformatics, Division of Integrative Genomics
Duke Box 103854, Durham, NC 27710
Hock Plaza 10048, 2424 Erwin Rd, Durham, NC 27705, Durham, NC 27705

Current Appointments & Affiliations


Associate Professor of Biostatistics & Bioinformatics · 2025 - Present Biostatistics & Bioinformatics, Division of Integrative Genomics, Biostatistics & Bioinformatics
Associate Professor of Computer Science · 2025 - Present Computer Science, Trinity College of Arts & Sciences
Member of the Duke Cancer Institute · 2019 - Present Duke Cancer Institute, Institutes and Centers

Recent Publications


Single-cell and spatial detection of senescent cells using DeepScence.

Journal Article Cell Genom · December 10, 2025 Accurately identifying senescent cells is essential for studying their spatial and molecular features. We developed DeepScence, a method based on deep neural networks, to identify senescent cells in single-cell and spatial transcriptomics data. DeepScence ... Full text Link to item Cite

KS03.4.A SPATIAL MULTI-OMIC PROFILING REVEALS DETERMINANTS OF TIL EXPANDABILITY IN HIGH-GRADE GLIOMAS

Conference Neuro-Oncology · October 3, 2025 AbstractBACKGROUNDTumor-infiltrating lymphocyte (TIL) therapy has demonstrated efficacy in melanoma and is emerging as a promising mod ... Full text Cite

Advancing biological understanding of cellular senescence with computational multiomics.

Journal Article Nat Genet · October 2025 Cellular senescence is a complex biological process that plays a pathophysiological role in aging and age-related diseases. The biological understanding of senescence at the cellular and tissue levels remains incomplete due to the lack of specific biomarke ... Full text Link to item Cite
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Recent Grants


Duke Program of Training in Pulmonary ReSearch to Promote, Engage and Retain Academic Researchers (PROSPER)

Inst. Training Prgm or CMEPreceptor · Awarded by National Heart, Lung, and Blood Institute · 2022 - 2026

New computational methods to dynamically pinpointing the subregions carrying disease-associated rare variants

ResearchPrincipal Investigator · Awarded by National Human Genome Research Institute · 2022 - 2026

Training Program in Bioinformatics at the Intersection of Cancer Immunology and Microbiome

ResearchTraining Faculty · Awarded by National Cancer Institute · 2020 - 2026

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Education, Training & Certifications


University of Pennsylvania · 2011 Ph.D.