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Characterizing the developmental pathways TTF-1, NKX2-8, and PAX9 in lung cancer.

Publication ,  Journal Article
Hsu, DS; Acharya, CR; Balakumaran, BS; Riedel, RF; Kim, MK; Stevenson, M; Tuchman, S; Mukherjee, S; Barry, W; Dressman, HK; Nevins, JR; Mu, D ...
Published in: Proc Natl Acad Sci U S A
March 31, 2009

We investigated the clinical implications of lung developmental transcription factors (TTF-1, NKX2-8, and PAX9) that we recently discovered as cooperating oncogenes activated by way of gene amplification at chromosome 14q13 in lung cancer. Using stable transfectants of human bronchial epithelial cells, RNA expression profiles (signatures) representing activation of the biological pathways defined by each of the 3 genes were determined and used to risk stratify a non-small-cell lung cancer (NSCLC) clinical data set consisting of 91 early stage tumors. Coactivation of the TTF-1 and NKX2-8 pathways identified a cluster of patients with poor survival, representing approximately 20% of patients with early stage NSCLC, whereas activation of individual pathways did not reveal significant prognostic power. Importantly, the poor prognosis associated with coactivation of TTF-1 and NKX2-8 was validated in 2 other independent clinical data sets. Furthermore, lung cancer cell lines showing coactivation of the TTF-1 and NKX2-8 pathways were shown to exhibit resistance to cisplatin, the standard of care for the treatment of NSCLC. This suggests that the cohort of patients with coactivation of TTF-1 and NKX2-8 pathways appears to be resistant to standard cisplatin therapy, suggesting the need for alternative therapies in this cohort of high-risk patients.

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Published In

Proc Natl Acad Sci U S A

DOI

EISSN

1091-6490

Publication Date

March 31, 2009

Volume

106

Issue

13

Start / End Page

5312 / 5317

Location

United States

Related Subject Headings

  • Transcription Factors
  • Survival Rate
  • Risk Assessment
  • Prognosis
  • PAX9 Transcription Factor
  • Oncogenes
  • Lung Neoplasms
  • Humans
  • Homeodomain Proteins
  • Gene Expression Profiling
 

Citation

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Hsu, D. S., Acharya, C. R., Balakumaran, B. S., Riedel, R. F., Kim, M. K., Stevenson, M., … Potti, A. (2009). Characterizing the developmental pathways TTF-1, NKX2-8, and PAX9 in lung cancer. Proc Natl Acad Sci U S A, 106(13), 5312–5317. https://doi.org/10.1073/pnas.0900827106
Hsu, David S., Chaitanya R. Acharya, Bala S. Balakumaran, Richard F. Riedel, Mickey K. Kim, Marvaretta Stevenson, Sascha Tuchman, et al. “Characterizing the developmental pathways TTF-1, NKX2-8, and PAX9 in lung cancer.Proc Natl Acad Sci U S A 106, no. 13 (March 31, 2009): 5312–17. https://doi.org/10.1073/pnas.0900827106.
Hsu DS, Acharya CR, Balakumaran BS, Riedel RF, Kim MK, Stevenson M, et al. Characterizing the developmental pathways TTF-1, NKX2-8, and PAX9 in lung cancer. Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5312–7.
Hsu, David S., et al. “Characterizing the developmental pathways TTF-1, NKX2-8, and PAX9 in lung cancer.Proc Natl Acad Sci U S A, vol. 106, no. 13, Mar. 2009, pp. 5312–17. Pubmed, doi:10.1073/pnas.0900827106.
Hsu DS, Acharya CR, Balakumaran BS, Riedel RF, Kim MK, Stevenson M, Tuchman S, Mukherjee S, Barry W, Dressman HK, Nevins JR, Powers S, Mu D, Potti A. Characterizing the developmental pathways TTF-1, NKX2-8, and PAX9 in lung cancer. Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5312–5317.
Journal cover image

Published In

Proc Natl Acad Sci U S A

DOI

EISSN

1091-6490

Publication Date

March 31, 2009

Volume

106

Issue

13

Start / End Page

5312 / 5317

Location

United States

Related Subject Headings

  • Transcription Factors
  • Survival Rate
  • Risk Assessment
  • Prognosis
  • PAX9 Transcription Factor
  • Oncogenes
  • Lung Neoplasms
  • Humans
  • Homeodomain Proteins
  • Gene Expression Profiling