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Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes.

Publication ,  Journal Article
Yang, Y; Lu, Q; Huang, C-M; Qian, H; Zhang, Y; Deshpande, S; Arya, G; Ke, Y; Zauscher, S
Published in: Angewandte Chemie (International ed. in English)
October 2021

Combining surface-initiated, TdT (terminal deoxynucleotidyl transferase) catalyzed enzymatic polymerization (SI-TcEP) with precisely engineered DNA origami nanostructures (DONs) presents an innovative pathway for the generation of stable, polynucleotide brush-functionalized DNA nanostructures. We demonstrate that SI-TcEP can site-specifically pattern DONs with brushes containing both natural and non-natural nucleotides. The brush functionalization can be precisely controlled in terms of the location of initiation sites on the origami core and the brush height and composition. Coarse-grained simulations predict the conformation of the brush-functionalized DONs that agree well with the experimentally observed morphologies. We find that polynucleotide brush-functionalization increases the nuclease resistance of DONs significantly, and that this stability can be spatially programmed through the site-specific growth of polynucleotide brushes. The ability to site-specifically decorate DONs with brushes of natural and non-natural nucleotides provides access to a large range of functionalized DON architectures that would allow for further supramolecular assembly, and for potential applications in smart nanoscale delivery systems.

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Published In

Angewandte Chemie (International ed. in English)

DOI

EISSN

1521-3773

ISSN

1433-7851

Publication Date

October 2021

Volume

60

Issue

43

Start / End Page

23241 / 23247

Related Subject Headings

  • Thymine Nucleotides
  • Proof of Concept Study
  • Polynucleotides
  • Polymerization
  • Organic Chemistry
  • Nucleic Acid Conformation
  • Nanostructures
  • Deoxyuracil Nucleotides
  • DNA Nucleotidylexotransferase
  • DNA
 

Citation

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Yang, Y., Lu, Q., Huang, C.-M., Qian, H., Zhang, Y., Deshpande, S., … Zauscher, S. (2021). Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes. Angewandte Chemie (International Ed. in English), 60(43), 23241–23247. https://doi.org/10.1002/anie.202107829
Yang, Yunqi, Qinyi Lu, Chao-Min Huang, Hongji Qian, Yunlong Zhang, Sonal Deshpande, Gaurav Arya, Yonggang Ke, and Stefan Zauscher. “Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes.Angewandte Chemie (International Ed. in English) 60, no. 43 (October 2021): 23241–47. https://doi.org/10.1002/anie.202107829.
Yang Y, Lu Q, Huang C-M, Qian H, Zhang Y, Deshpande S, et al. Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes. Angewandte Chemie (International ed in English). 2021 Oct;60(43):23241–7.
Yang, Yunqi, et al. “Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes.Angewandte Chemie (International Ed. in English), vol. 60, no. 43, Oct. 2021, pp. 23241–47. Epmc, doi:10.1002/anie.202107829.
Yang Y, Lu Q, Huang C-M, Qian H, Zhang Y, Deshpande S, Arya G, Ke Y, Zauscher S. Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes. Angewandte Chemie (International ed in English). 2021 Oct;60(43):23241–23247.
Journal cover image

Published In

Angewandte Chemie (International ed. in English)

DOI

EISSN

1521-3773

ISSN

1433-7851

Publication Date

October 2021

Volume

60

Issue

43

Start / End Page

23241 / 23247

Related Subject Headings

  • Thymine Nucleotides
  • Proof of Concept Study
  • Polynucleotides
  • Polymerization
  • Organic Chemistry
  • Nucleic Acid Conformation
  • Nanostructures
  • Deoxyuracil Nucleotides
  • DNA Nucleotidylexotransferase
  • DNA