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VALIDATION OF A DEEP LEARNING-BASED ALGORITHM FOR SEGMENTATION OF THE ELLIPSOID ZONE ON OPTICAL COHERENCE TOMOGRAPHY IMAGES OF AN USH2A-RELATED RETINAL DEGENERATION CLINICAL TRIAL.

Publication ,  Journal Article
Loo, J; Jaffe, GJ; Duncan, JL; Birch, DG; Farsiu, S
Published in: Retina
July 1, 2022

PURPOSE: To assess the generalizability of a deep learning-based algorithm to segment the ellipsoid zone (EZ). METHODS: The dataset consisted of 127 spectral-domain optical coherence tomography volumes from eyes of participants with USH2A-related retinal degeneration enrolled in the RUSH2A clinical trial (NCT03146078). The EZ was segmented manually by trained readers and automatically by deep OCT atrophy detection, a deep learning-based algorithm originally developed for macular telangiectasia Type 2. Performance was evaluated using the Dice similarity coefficient between the segmentations, and the absolute difference and Pearson's correlation of measurements of interest obtained from the segmentations. RESULTS: With deep OCT atrophy detection, the average (mean ± SD, median) Dice similarity coefficient was 0.79 ± 0.27, 0.90. The average absolute difference in total EZ area was 0.62 ± 1.41, 0.22 mm2 with a correlation of 0.97. The average absolute difference in the maximum EZ length was 222 ± 288, 126 µm with a correlation of 0.97. CONCLUSION: Deep OCT atrophy detection segmented EZ in USH2A-related retinal degeneration with good performance. The algorithm is potentially generalizable to other diseases and other biomarkers of interest as well, which is an important aspect of clinical applicability.

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Published In

Retina

DOI

EISSN

1539-2864

Publication Date

July 1, 2022

Volume

42

Issue

7

Start / End Page

1347 / 1355

Location

United States

Related Subject Headings

  • Visual Acuity
  • Tomography, Optical Coherence
  • Retinal Degeneration
  • Ophthalmology & Optometry
  • Humans
  • Extracellular Matrix Proteins
  • Deep Learning
  • Atrophy
  • Algorithms
  • 3212 Ophthalmology and optometry
 

Citation

APA
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Loo, J., Jaffe, G. J., Duncan, J. L., Birch, D. G., & Farsiu, S. (2022). VALIDATION OF A DEEP LEARNING-BASED ALGORITHM FOR SEGMENTATION OF THE ELLIPSOID ZONE ON OPTICAL COHERENCE TOMOGRAPHY IMAGES OF AN USH2A-RELATED RETINAL DEGENERATION CLINICAL TRIAL. Retina, 42(7), 1347–1355. https://doi.org/10.1097/IAE.0000000000003448
Loo, Jessica, Glenn J. Jaffe, Jacque L. Duncan, David G. Birch, and Sina Farsiu. “VALIDATION OF A DEEP LEARNING-BASED ALGORITHM FOR SEGMENTATION OF THE ELLIPSOID ZONE ON OPTICAL COHERENCE TOMOGRAPHY IMAGES OF AN USH2A-RELATED RETINAL DEGENERATION CLINICAL TRIAL.Retina 42, no. 7 (July 1, 2022): 1347–55. https://doi.org/10.1097/IAE.0000000000003448.

Published In

Retina

DOI

EISSN

1539-2864

Publication Date

July 1, 2022

Volume

42

Issue

7

Start / End Page

1347 / 1355

Location

United States

Related Subject Headings

  • Visual Acuity
  • Tomography, Optical Coherence
  • Retinal Degeneration
  • Ophthalmology & Optometry
  • Humans
  • Extracellular Matrix Proteins
  • Deep Learning
  • Atrophy
  • Algorithms
  • 3212 Ophthalmology and optometry