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Photon-Counting Micro-CT for Bone Morphometry in Murine Models.

Publication ,  Journal Article
Nadkarni, R; Han, ZY; Allphin, AJ; Clark, DP; Badea, A; Badea, CT
Published in: Tomography (Ann Arbor, Mich.)
November 2025

This study evaluates photon-counting CT (PCCT) for the imaging of mouse femurs and investigates how APOE genotype, sex, and humanized nitric oxide synthase (HN) expression influence bone morphology during aging.A custom-built micro-CT system with a photon-counting detector (PCD) was used to acquire dual-energy scans of mouse femur samples. PCCT projections were corrected for tile gain differences, iteratively reconstructed with 20 µm isotropic resolution, and decomposed into calcium and water maps. PCD spatial resolution was benchmarked against an energy-integrating detector (EID) using line profiles through trabecular bone. The contrast-to-noise ratio quantified the effects of iterative reconstruction and material decomposition. Femur features such as mean cortical thickness, mean trabecular spacing (TbSp_mean), and trabecular bone volume fraction (BV/TV) were extracted from calcium maps using BoneJ. The statistical analysis used 57 aged mice representing the APOE22, APOE33, and APOE44 genotypes, including 27 expressing HN. We used generalized linear models (GLMs) to evaluate the main interaction effects of age, sex, genotype, and HN status on femur features and Mann-Whitney U tests for stratified analyses.PCCT outperformed EID-CT in spatial resolution and enabled the effective separation of calcium and water. Female HN mice exhibited reduced BV/TV compared to both male HN and female non-HN mice. While genotype effects were modest, a genotype-by-sex stratified analysis found significant effects of HN status in female APOE22 and APOE44 mice only. Linear regression showed that age significantly decreased cortical thickness and increased TbSp_mean in male mice only.These results demonstrate PCCT's utility for femur analysis and reveal strong effects of sex/HN interaction on trabecular bone health in mice.

Duke Scholars

Published In

Tomography (Ann Arbor, Mich.)

DOI

EISSN

2379-139X

ISSN

2379-1381

Publication Date

November 2025

Volume

11

Issue

11

Start / End Page

127

Related Subject Headings

  • X-Ray Microtomography
  • Sex Factors
  • Models, Animal
  • Mice, Inbred C57BL
  • Mice
  • Male
  • Genotype
  • Femur
  • Female
  • Cancellous Bone
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Nadkarni, R., Han, Z. Y., Allphin, A. J., Clark, D. P., Badea, A., & Badea, C. T. (2025). Photon-Counting Micro-CT for Bone Morphometry in Murine Models. Tomography (Ann Arbor, Mich.), 11(11), 127. https://doi.org/10.3390/tomography11110127
Nadkarni, Rohan, Zay Yar Han, Alex J. Allphin, Darin P. Clark, Alexandra Badea, and Cristian T. Badea. “Photon-Counting Micro-CT for Bone Morphometry in Murine Models.Tomography (Ann Arbor, Mich.) 11, no. 11 (November 2025): 127. https://doi.org/10.3390/tomography11110127.
Nadkarni R, Han ZY, Allphin AJ, Clark DP, Badea A, Badea CT. Photon-Counting Micro-CT for Bone Morphometry in Murine Models. Tomography (Ann Arbor, Mich). 2025 Nov;11(11):127.
Nadkarni, Rohan, et al. “Photon-Counting Micro-CT for Bone Morphometry in Murine Models.Tomography (Ann Arbor, Mich.), vol. 11, no. 11, Nov. 2025, p. 127. Epmc, doi:10.3390/tomography11110127.
Nadkarni R, Han ZY, Allphin AJ, Clark DP, Badea A, Badea CT. Photon-Counting Micro-CT for Bone Morphometry in Murine Models. Tomography (Ann Arbor, Mich). 2025 Nov;11(11):127.

Published In

Tomography (Ann Arbor, Mich.)

DOI

EISSN

2379-139X

ISSN

2379-1381

Publication Date

November 2025

Volume

11

Issue

11

Start / End Page

127

Related Subject Headings

  • X-Ray Microtomography
  • Sex Factors
  • Models, Animal
  • Mice, Inbred C57BL
  • Mice
  • Male
  • Genotype
  • Femur
  • Female
  • Cancellous Bone