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Alberto Bartesaghi

Associate Professor of Computer Science
Computer Science
308 Research Drive, LSRC D338, Durham, NC 27708-0129

Overview


Dr. Bartesaghi is an Associate Professor in the departments of Computer Science, Biochemistry and Electrical and Computer Engineering at Duke University. The Bartesaghi Lab focuses on the development of machine learning approaches to determine the structure of macromolecular complexes of general biomedical interest using single-particle cryo-electron microscopy, cryo-electron tomography, and sub-volume averaging. Some of our targets include glycoproteins of enveloped viruses like HIV, Influenza and Ebola, transporters and channels involved in signaling and metabolism, GPCRs, DNA-targeting CRISPR-Cas surveillance complexes, and targets for cancer drugs. The lab also works more broadly in the fields of deep learning and artificial intelligence, computer vision, biomedical imaging, and high-performance computing.

Current Appointments & Affiliations


Associate Professor of Computer Science · 2022 - Present Computer Science, Trinity College of Arts & Sciences
Associate Professor of Biochemistry · 2018 - Present Biochemistry, Basic Science Departments
Associate Professor in the Department of Electrical and Computer Engineering · 2023 - Present Electrical and Computer Engineering, Pratt School of Engineering
Faculty Network Member of the Duke Institute for Brain Sciences · 2018 - Present Duke Institute for Brain Sciences, University Institutes and Centers

In the News


Published June 17, 2021
Chan Zuckerberg Initiative Invests in Duke Team’s Work to Improve Cryo-EM Images
Published April 6, 2021
Duke Team Makes Cryo-EM Microscope Even Better Than Before
Published March 5, 2021
Duke & UNC: Rivals on the Court, Teammates in Science

View All News

Recent Publications


Mouse α-synuclein fibrils are structurally and functionally distinct from human fibrils associated with Lewy body diseases.

Journal Article Sci Adv · November 2024 The intricate process of α-synuclein aggregation and fibrillization holds pivotal roles in Parkinson's disease (PD) and multiple system atrophy (MSA). While mouse α-synuclein can fibrillize in vitro, whether these fibrils commonly used in research to induc ... Full text Link to item Cite

MiLoPYP: self-supervised molecular pattern mining and particle localization in situ.

Journal Article Nature methods · October 2024 Cryo-electron tomography allows the routine visualization of cellular landscapes in three dimensions at nanometer-range resolutions. When combined with single-particle tomography, it is possible to obtain near-atomic resolution structures of frequently occ ... Full text Cite

Structures of trehalose-6-phosphate synthase, Tps1, from the fungal pathogen Cryptococcus neoformans: A target for antifungals.

Journal Article Proc Natl Acad Sci U S A · August 6, 2024 Invasive fungal diseases are a major threat to human health, resulting in more than 1.5 million annual deaths worldwide. The arsenal of antifungal therapeutics remains limited and is in dire need of drugs that target additional biosynthetic pathways that a ... Full text Link to item Cite
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Recent Grants


Structural and Functional Analysis of Nucleocytoplasmic Protein O-Glycosyltransferases in Plants

ResearchCollaborator · Awarded by National Institute of General Medical Sciences · 2023 - 2027

Mechanisms of LRRK2 Mediated Neurotoxicity

ResearchCollaborating Investigator · Awarded by National Institutes of Health · 2018 - 2026

Mechanistic Insights into the Plant Disease Resistance Mediated by NPR1

ResearchCo Investigator · Awarded by National Institute of General Medical Sciences · 2022 - 2026

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Education, Training & Certifications


University of Minnesota, Twin Cities · 2005 D.Phil.

External Links


Bartesaghi Lab