Overview
Dr. Bartesaghi is an Associate Professor in the departments of Computer Science, Biochemistry and Electrical and Computer Engineering at Duke University. The Bartesaghi Lab focuses on the development of machine learning approaches to determine the structure of macromolecular complexes of general biomedical interest using single-particle cryo-electron microscopy, cryo-electron tomography, and sub-volume averaging. Some of our targets include glycoproteins of enveloped viruses like HIV, Influenza and Ebola, transporters and channels involved in signaling and metabolism, GPCRs, DNA-targeting CRISPR-Cas surveillance complexes, and targets for cancer drugs. The lab also works more broadly in the fields of deep learning and artificial intelligence, computer vision, biomedical imaging, and high-performance computing.
Current Appointments & Affiliations
Recent Publications
Mouse α-synuclein fibrils are structurally and functionally distinct from human fibrils associated with Lewy body diseases.
Journal Article Sci Adv · November 2024 The intricate process of α-synuclein aggregation and fibrillization holds pivotal roles in Parkinson's disease (PD) and multiple system atrophy (MSA). While mouse α-synuclein can fibrillize in vitro, whether these fibrils commonly used in research to induc ... Full text Link to item CiteMiLoPYP: self-supervised molecular pattern mining and particle localization in situ.
Journal Article Nature methods · October 2024 Cryo-electron tomography allows the routine visualization of cellular landscapes in three dimensions at nanometer-range resolutions. When combined with single-particle tomography, it is possible to obtain near-atomic resolution structures of frequently occ ... Full text CiteStructures of trehalose-6-phosphate synthase, Tps1, from the fungal pathogen Cryptococcus neoformans: A target for antifungals.
Journal Article Proc Natl Acad Sci U S A · August 6, 2024 Invasive fungal diseases are a major threat to human health, resulting in more than 1.5 million annual deaths worldwide. The arsenal of antifungal therapeutics remains limited and is in dire need of drugs that target additional biosynthetic pathways that a ... Full text Link to item CiteRecent Grants
Structural and Functional Analysis of Nucleocytoplasmic Protein O-Glycosyltransferases in Plants
ResearchCollaborator · Awarded by National Institute of General Medical Sciences · 2023 - 2027Mechanisms of LRRK2 Mediated Neurotoxicity
ResearchCollaborating Investigator · Awarded by National Institutes of Health · 2018 - 2026Mechanistic Insights into the Plant Disease Resistance Mediated by NPR1
ResearchCo Investigator · Awarded by National Institute of General Medical Sciences · 2022 - 2026View All Grants