Scholars@Duke

• Background
• 

  Education, Training, & Certifications

  • Pulmonary and Critical Care Fellowship, Medicine, Duke University School of Medicine 2016 - 2018
  • M.M.C.i., Duke University School of Medicine 2017
  • Chief Resident, Duke Regional Hospital & Ambulatory Clinics, Medicine, Duke University School of Medicine 2015 - 2016
  • Pulmonary and Critical Care Fellowship, Medicine, Duke University School of Medicine 2014 - 2015
  • Pulmonary and Critical Care Medicine Fellowship, Medicine, Duke University School of Medicine 2014 - 2015
  • Internal Medicine Residency, Medicine, Duke University School of Medicine 2011 - 2014
  • M.D., Brown University, Warren Alpert Medical School 2011
• 

  Previous Appointments & Affiliations

  • Assistant Professor of Medicine, Medicine, Pulmonary, Allergy, and Critical Care Medicine, Medicine 2020
  • Medical Instructor in the Department of Medicine, Medicine, Pulmonary, Allergy, and Critical Care Medicine, Medicine 2018 - 2020
  • Medical Instructor in the Department of Medicine, Medicine, General Internal Medicine, Medicine 2015 - 2016
• 

  Leadership & Clinical Positions at Duke

  • Associate Chief Medical Informatics Officer for Applied Data Science
• Expertise
• 

  Subject Headings

  • Data Science
  • Decision Support Systems, Clinical
  • Machine learning
  • Medical Informatics
• Research
• 

  Selected Grants

  • Engaging Multidisciplinary Health System Stakeholders to Create a Process for Implementing Machine-Learning Enabled Clinical Decision Support awarded by National Institutes of Health 2022 - 2024
• Publications & Artistic Works
• 

  Selected Publications

  • Academic Articles

    • Pleasants, Roy A., Armando D. Bedoya, Joel M. Boggan, Karen Welty-Wolf, and Robert M. Tighe. “The Eyes Have It-for Idiopathic Pulmonary Fibrosis: a Preliminary Observation.” Pulm Ther 8, no. 3 (September 2022): 327–31. https://doi.org/10.1007/s41030-022-00198-5.
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    • Bedoya, Armando D., Nicoleta J. Economou-Zavlanos, Benjamin A. Goldstein, Allison Young, J Eric Jelovsek, Cara O’Brien, Amanda B. Parrish, et al. “A framework for the oversight and local deployment of safe and high-quality prediction models.” J Am Med Inform Assoc 29, no. 9 (August 16, 2022): 1631–36. https://doi.org/10.1093/jamia/ocac078.
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    • Cavalier, Joanna, Congwen Zhao, Julia Scialla, Armando Bedoya, and Benjamin A. Goldstein. “Performance of the National Early Warning Score in Hospitalized Patients With Kidney Failure on Maintenance Hemodialysis.” Kidney Med 4, no. 8 (August 2022): 100506. https://doi.org/10.1016/j.xkme.2022.100506.
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    • Sendak, Mark P., Michael Gao, William Ratliff, Marshall Nichols, Armando Bedoya, Cara O’Brien, and Suresh Balu. “Looking for clinician involvement under the wrong lamp post: The need for collaboration measures.” J Am Med Inform Assoc 28, no. 11 (October 12, 2021): 2541–42. https://doi.org/10.1093/jamia/ocab129.
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    • Bedoya, Armando, Roy A. Pleasants, Joel C. Boggan, Danielle Seaman, Anne Reihman, Lauren Howard, Robert Kundich, Karen Welty-Wolf, and Robert M. Tighe. “Interstitial lung disease in a veterans affairs regional network; a retrospective cohort study.” Plos One 16, no. 3 (2021): e0247316. https://doi.org/10.1371/journal.pone.0247316.
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    • Giri, Paresh C., Anand M. Chowdhury, Armando Bedoya, Hengji Chen, Hyun Suk Lee, Patty Lee, Craig Henriquez, Neil R. MacIntyre, and Yuh-Chin T. Huang. “Application of Machine Learning in Pulmonary Function Assessment Where Are We Now and Where Are We Going?” Front Physiol 12 (2021): 678540. https://doi.org/10.3389/fphys.2021.678540.
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    • Sandhu, Sahil, Anthony L. Lin, Nathan Brajer, Jessica Sperling, William Ratliff, Armando D. Bedoya, Suresh Balu, Cara O’Brien, and Mark P. Sendak. “Integrating a Machine Learning System Into Clinical Workflows: Qualitative Study.” J Med Internet Res 22, no. 11 (November 19, 2020): e22421. https://doi.org/10.2196/22421.
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    • Bedoya, Armando D., Nrupen A. Bhavsar, Bhargav Adagarla, Courtney B. Page, Benjamin A. Goldstein, and Neil R. MacIntyre. “Unanticipated Respiratory Compromise and Unplanned Intubations on General Medical and Surgical Floors.” Respir Care 65, no. 9 (September 2020): 1233–40. https://doi.org/10.4187/respcare.07438.
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    • Woo, Myung, Brooke Alhanti, Sam Lusk, Felicia Dunston, Stephen Blackwelder, Kay S. Lytle, Benjamin A. Goldstein, and Armando Bedoya. “Evaluation of ML-Based Clinical Decision Support Tool to Replace an Existing Tool in an Academic Health System: Lessons Learned.” J Pers Med 10, no. 3 (August 27, 2020). https://doi.org/10.3390/jpm10030104.
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    • Goldstein, Benjamin A., and Armando D. Bedoya. “Guiding Clinical Decisions Through Predictive Risk Rules.” Jama Netw Open 3, no. 8 (August 3, 2020): e2013101. https://doi.org/10.1001/jamanetworkopen.2020.13101.
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    • Sendak, Mark P., William Ratliff, Dina Sarro, Elizabeth Alderton, Joseph Futoma, Michael Gao, Marshall Nichols, et al. “Real-World Integration of a Sepsis Deep Learning Technology Into Routine Clinical Care: Implementation Study.” Jmir Med Inform 8, no. 7 (July 15, 2020): e15182. https://doi.org/10.2196/15182.
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    • Bedoya, Armando D., Joseph Futoma, Meredith E. Clement, Kristin Corey, Nathan Brajer, Anthony Lin, Morgan G. Simons, et al. “Machine learning for early detection of sepsis: an internal and temporal validation study.” Jamia Open 3, no. 2 (July 2020): 252–60. https://doi.org/10.1093/jamiaopen/ooaa006.
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    • Watson, Joshua, Carolyn A. Hutyra, Shayna M. Clancy, Anisha Chandiramani, Armando Bedoya, Kumar Ilangovan, Nancy Nderitu, and Eric G. Poon. “Overcoming barriers to the adoption and implementation of predictive modeling and machine learning in clinical care: what can we learn from US academic medical centers?” Jamia Open 3, no. 2 (July 2020): 167–72. https://doi.org/10.1093/jamiaopen/ooz046.
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    • O’Brien, Cara, Benjamin A. Goldstein, Yueqi Shen, Matthew Phelan, Curtis Lambert, Armando D. Bedoya, and Rebecca C. Steorts. “Development, Implementation, and Evaluation of an In-Hospital Optimized Early Warning Score for Patient Deterioration.” Mdm Policy Pract 5, no. 1 (2020): 2381468319899663. https://doi.org/10.1177/2381468319899663.
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    • Bedoya, Armando D., Meredith E. Clement, Matthew Phelan, Rebecca C. Steorts, Cara O’Brien, and Benjamin A. Goldstein. “Minimal Impact of Implemented Early Warning Score and Best Practice Alert for Patient Deterioration.” Crit Care Med 47, no. 1 (January 2019): 49–55. https://doi.org/10.1097/CCM.0000000000003439.
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    • Futoma, Joseph, Sanjay Hariharan, Mark Sendak, Nathan Brajer, Meredith Clement, Armando Bedoya, Cara O’Brien, and Katherine Heller. “An Improved Multi-Output Gaussian Process RNN with Real-Time Validation for Early Sepsis Detection,” August 19, 2017.
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    • Bedoya, Armando, Kristen Glisinski, Jeffrey Clarke, Richard N. Lind, Charles Edward Buckley, and Scott Shofer. “Systemic Bevacizumab for Recurrent Respiratory Papillomatosis: A Single Center Experience of Two Cases.” Am J Case Rep 18 (July 31, 2017): 842–46. https://doi.org/10.12659/ajcr.904416.
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    • Snyder, L. D., A. L. Gray, J. M. Reynolds, G. M. Arepally, A. Bedoya, M. G. Hartwig, R. D. Davis, et al. “Antibody desensitization therapy in highly sensitized lung transplant candidates.” Am J Transplant 14, no. 4 (April 2014): 849–56. https://doi.org/10.1111/ajt.12636.
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    • Bedoya, A. D., J. L. Todd, T. Martinu, S. M. Palmer, and L. D. Snyder. “Lung Transplantation For Pulmonary Complications After Bone Marrow Transplantation.” American Journal of Respiratory and Critical Care Medicine 187 (January 1, 2013).
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    • Winston, Susanna E., Brian T. Montague, Michael J. Lopez, Allison Delong, Chloe Lemarchand, Armando Bedoya, Fizza S. Gillani, and Curt G. Beckwith. “Evaluation of longitudinal clinical outcomes and adherence to care among HIV-infected refugees.” J Int Assoc Provid Aids Care 12, no. 3 (2013): 202–7. https://doi.org/10.1177/1545109712459680.
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    • Gundogan, Fusun, Armando Bedoya, Jeffrey Gilligan, Emily Lau, Princess Mark, Monique E. De Paepe, and Suzanne M. de la Monte. “siRNA inhibition of aspartyl-asparaginyl β-hydroxylase expression impairs cell motility, Notch signaling, and fetal growth.” Pathol Res Pract 207, no. 9 (September 15, 2011): 545–53. https://doi.org/10.1016/j.prp.2011.06.001.
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    • Bedoya, Armando, Matthew Hudson, Julie H. Song, and Edward Feller. “Fever and an expanding pancreatic fluid collection.” Med Health R I 94, no. 3 (March 2011): 81–82.
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    • Bedoya, Armando, and Bethany Gentilesco. “Prosthetic valve endocarditis: a complication of spinal epidural abscess.” Case Rep Med 2010 (2010): 105426. https://doi.org/10.1155/2010/105426.
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  • Conference Papers

    • Vose, A., B. P. Patel, A. Bedoya, R. M. Tighe, and S. L. Shofer. “Impulse Oscillometry Identifies Small Airways Pathology Among Obese Patients Otherwise Missed by Traditional Spirometry.” In American Journal of Respiratory and Critical Care Medicine, Vol. 203, 2021.
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    • Sendak, M., M. C. Elish, M. Gao, J. Futoma, W. Ratliff, M. Nichols, A. Bedoya, S. Balu, and C. O’Brien. ““The human body is a black box”: Supporting clinical decision-making with deep learning.” In Fat* 2020  Proceedings of the 2020 Conference on Fairness, Accountability, and Transparency, 99–109, 2020. https://doi.org/10.1145/3351095.3372827.
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    • Kaur, A., A. Reihman, R. A. Pleasants, J. Boggan, L. Howard, R. Kundich, K. E. Welty-Wolf, A. Bedoya, and R. M. Tighe. “Assessing the Frequency of Pulmonary Function Testing in Veterans with Idiopathic Pulmonary Fibrosis at Time of Diagnosis.” In American Journal of Respiratory and Critical Care Medicine, Vol. 201, 2020.
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    • Theiling, B. J., R. Donohoe, M. Sendak, A. Bedoya, M. Gao, W. Ratliff, L. Denis, S. Balu, and C. O’Brein. “2 Sepsis Watch: A Successful Deployment of a Deep Learning Sepsis Detection and Treatment Platform.” In Annals of Emergency Medicine, 74:S1–2. Elsevier BV, 2019. https://doi.org/10.1016/j.annemergmed.2019.08.005.
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    • Bedoya, A., C. Page, B. Adagarla, N. Bhavsar, B. Goldstein, and N. R. MacIntyre. “Respiratory Failure and Unplanned Intubations in General Floor Patients.” In American Journal of Respiratory and Critical Care Medicine, Vol. 199. AMER THORACIC SOC, 2019.
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    • Pleasants, Roy, Armando Bedoya, Robert Kundich, Anne Reihman, Karen Welty-Wolf, and Robert Tighe. “Combined idiopathic interstitial pneumonia(IIP) and emphysema(E) in the Veterans Administration(VA) health system: characteristics, tobacco Use, and outcomes.” In Idiopathic Interstitial Pneumonias. European Respiratory Society, 2018. https://doi.org/10.1183/13993003.congress-2018.pa2207.
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    • Lin, A. L., M. Sendak, A. Bedoya, M. Clement, J. Futoma, M. Nichols, M. Gao, K. Heller, and C. O’Brien. “What Is Sepsis: Investigating the Heterogeneity of Patient Populations Captured by Different Sepsis Definitions.” In American Journal of Respiratory and Critical Care Medicine, Vol. 197. AMER THORACIC SOC, 2018.
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    • Pleasants, R. A., A. Bedoya, R. Kundich, J. Boggan, A. Reihman, D. Seaman, L. Howard, K. E. Welty-Wolf, and R. M. Tighe. “Characteristics of Connective Tissue Related Interstitial Lung Disease in the Mid- Atlantic Veterans Affairs Regional Network.” In American Journal of Respiratory and Critical Care Medicine, Vol. 197. AMER THORACIC SOC, 2018.
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    • Reihman, A., A. Bedoya, R. A. Pleasants, J. Boggan, L. Howard, R. Kundich, K. E. Welty-Wolf, and R. M. Tighe. “Initial Pulmonary Function Patterns Define Clinical Characteristics in Veterans Affairs Cohort with Interstitial Lung Disease.” In American Journal of Respiratory and Critical Care Medicine, Vol. 197. AMER THORACIC SOC, 2018.
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    • Bedoya, A. D., R. Pleasants, J. Boggan, D. Seaman, L. Howard, A. Reihman, K. Welty-Wolf, and R. M. Tighe. “Characteristics Of Interstitial Lung Disease In The Mid-Atlantic Veterans Affairs Regional Network.” In American Journal of Respiratory and Critical Care Medicine, Vol. 195. AMER THORACIC SOC, 2017.
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