Scholars@Duke

• Background
• 

  Education, Training, & Certifications

  • Certificate In Therapeutic Radiologic Physics, Radiation Physics, American Board of Radiology 1996 - 2058
  • Ph.D., The University of Chicago 1992
  • M.S., Bowling Green State University 1987
  • B.S., Zhejiang University (China) 1982
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  Previous Appointments & Affiliations

  • Professor of Medical Physics at Duke Kunshan University, DKU Faculty, Duke Kunshan University 2016 - 2020
  • Instructor, Temporary in the Department of Radiation Oncology, Radiation Oncology, Clinical Science Departments 2004
• 

  Leadership & Clinical Positions at Duke

  • Director of Radiation Physics, Department of Radiation Oncology
    Director of Medical Physics Residency program in Radiation Oncology
    Director of Medical Physics Graduate Program at Duke Kunshan University
• Recognition
• 

  In the News

  • JUN 28, 2021

    Duke Awards 22 Distinguished Professorships
• 

  Awards & Honors

  • Fellow. American Association of Radiation Oncology. 2017
  • Fellow. American Association of Physicists in Medicine. 2006
• Expertise
• 

  Subject Headings

  • Bioinformatics
  • Medical physics
• 

  Global Scholarship

  • Expertise

    • China (Country) 
    • North Carolina (State or Province) 

  • Research

    • China (Country) 
• Research
• 

  Selected Grants

  • Multi-scale characterization of radiation resistance in head and neck squamous cell carcinoma awarded by Department of Defense 2021 - 2024
  • Developing a workflow for clinical evaluation of a hybrid virtual-MRI/CBCT system for precision image guidance in radiation therapy awarded by Varian Medical Systems, Inc. 2020 - 2023
  • Hybrid virtual-MRI/CBCT: A new paradigm for image guidance in liver SBRT awarded by University of Maryland, Baltimore 2021 - 2023
  • Knowledge-based Tutoring for Knowledge-based Radiation Therapy awarded by Varian Medical Systems, Inc. 2020 - 2022
  • Clinical Experience Guided Reinforcement Learning for Pancreas SBRT awarded by Varian Medical Systems, Inc. 2019 - 2022
  • Advanced technologies for quality assurance in external radiation therapy awarded by IBA Dosimetry 2020 - 2022
  • Image-guided Dosimetry for Injectable Brachytherapy based on Elastin-like Polypeptide Nanoparticles awarded by National Institutes of Health 2017 - 2021
  • Hybrid virtual-MRI/CBCT: A new paradigm for image guidance in liver SBRT awarded by National Institutes of Health 2019 - 2021
  • A Limited-angle Intra-fractional Verification (LIVE) System for SBRT Treatments awarded by National Institutes of Health 2014 - 2020
  • Lung Ventilation Mapping Based On Biomechanical Motion Modeling for Radiation Therapy awarded by National Institutes of Health 2019 - 2020
  • Assessing deformable image registration in the lung using hyperpolarized-gas MRI awarded by National Institutes of Health 2016 - 2018
  • Motion Management Using 4D-MRI for Liver Cancer in Radiation Therapy awarded by National Institutes of Health 2013 - 2016
  • A synchronized moving grid system to improve CBCT for IGRT and ART awarded by Georgia Regents University 2013 - 2016
  • Accurate, High Resolution 3D Dosimetry awarded by National Institutes of Health 2004 - 2013
  • Robotic SPECT for Biological Imaging Onboard Radiation Therapy Machines awarded by National Institutes of Health 2011 - 2013
  • Cross-disciplinary Training in Medical Physics awarded by National Institutes of Health 2007 - 2013
  • Digital tomosynthesis: a new paradigm for radiation treatment verification awarded by National Institutes of Health 2007 - 2009
• 

  External Relationships

  • Duke Kunshan University - Adjunct faculty in Medical Physics Graduate Program on behalf of Duke University to assist medical physics graduate program including teaching and academic mentoring
• Publications & Artistic Works
• 

  Selected Publications

  • Academic Articles

    • Erickson, Brett G., Yunfeng Cui, Bradley G. Ackerson, Christopher R. Kelsey, Fang-Fang Yin, Donna Niedzwiecki, and Justus Adamson. “Uncertainties in the dosimetric heterogeneity correction and its potential effect on local control in lung SBRT.” Biomed Phys Eng Express 9, no. 3 (March 7, 2023). https://doi.org/10.1088/2057-1976/acbeae.
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    • Subashi, Ergys, Li Feng, Yilin Liu, Scott Robertson, Paul Segars, Bastiaan Driehuys, Christopher R. Kelsey, Fang-Fang Yin, Ricardo Otazo, and Jing Cai. “View-sharing for 4D magnetic resonance imaging with randomized projection-encoding enables improvements of respiratory motion imaging for treatment planning in abdominothoracic radiotherapy.” Phys Imaging Radiat Oncol 25 (January 2023): 100409. https://doi.org/10.1016/j.phro.2022.12.006.
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    • Yang, Zhenyu, Kyle J. Lafata, Xinru Chen, James Bowsher, Yushi Chang, Chunhao Wang, and Fang-Fang Yin. “Quantification of lung function on CT images based on pulmonary radiomic filtering.” Med Phys 49, no. 11 (November 2022): 7278–86. https://doi.org/10.1002/mp.15837.
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    • Li, Xinyi, Yaorong Ge, Qiuwen Wu, Chunhao Wang, Yang Sheng, Wentao Wang, Hunter Stephens, Fang-Fang Yin, and Q Jackie Wu. “Input feature design and its impact on the performance of deep learning models for predicting fluence maps in intensity-modulated radiation therapy.” Phys Med Biol 67, no. 21 (October 21, 2022). https://doi.org/10.1088/1361-6560/ac9882.
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    • Jiang, Zhuoran, Yushi Chang, Zeyu Zhang, Fang-Fang Yin, and Lei Ren. “Fast four-dimensional cone-beam computed tomography reconstruction using deformable convolutional networks.” Med Phys 49, no. 10 (October 2022): 6461–76. https://doi.org/10.1002/mp.15806.
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    • Lafata, Kyle J., Yuqi Wang, Brandon Konkel, Fang-Fang Yin, and Mustafa R. Bashir. “Radiomics: a primer on high-throughput image phenotyping.” Abdom Radiol (Ny) 47, no. 9 (September 2022): 2986–3002. https://doi.org/10.1007/s00261-021-03254-x.
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    • Zhang, Lei, Fang-Fang Yin, Ke Lu, Brittany Moore, Silu Han, and Jing Cai. “Improving liver tumor image contrast and synthesizing novel tissue contrasts by adaptive multiparametric MRI fusion.” Precis Radiat Oncol 6, no. 3 (September 2022): 190–98. https://doi.org/10.1002/pro6.1167.
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    • Cui, Yunfeng, and Fang-Fang Yin. “Impact of image quality on radiomics applications.” Phys Med Biol 67, no. 15 (July 22, 2022). https://doi.org/10.1088/1361-6560/ac7fd7.
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    • Zhang, Zeyu, Zhuoran Jiang, Hualiang Zhong, Ke Lu, Fang-Fang Yin, and Lei Ren. “Patient-specific synthetic magnetic resonance imaging generation from cone beam computed tomography for image guidance in liver stereotactic body radiation therapy.” Precis Radiat Oncol 6, no. 2 (June 2022): 110–18. https://doi.org/10.1002/pro6.1163.
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    • Lu, Ke, Lei Ren, and Fang-Fang Yin. “A geometry-guided multi-beamlet deep learning technique for CT reconstruction.” Biomed Phys Eng Express 8, no. 4 (May 13, 2022). https://doi.org/10.1088/2057-1976/ac6d12.
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    • Zhang, Zeyu, Mi Huang, Zhuoran Jiang, Yushi Chang, Ke Lu, Fang-Fang Yin, Phuoc Tran, Dapeng Wu, Chris Beltran, and Lei Ren. “Patient-specific deep learning model to enhance 4D-CBCT image for radiomics analysis.” Phys Med Biol 67, no. 8 (April 1, 2022). https://doi.org/10.1088/1361-6560/ac5f6e.
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    • Jiang, Zhuoran, Zeyu Zhang, Yushi Chang, Yun Ge, Fang-Fang Yin, and Lei Ren. “Enhancement of 4-D Cone-Beam Computed Tomography (4D-CBCT) Using a Dual-Encoder Convolutional Neural Network (DeCNN).” Ieee Trans Radiat Plasma Med Sci 6, no. 2 (February 2022): 222–30. https://doi.org/10.1109/trpms.2021.3133510.
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    • Cui, Guoqiang, Yun Yang, Fang-Fang Yin, David Yoo, Grace Kim, and Jun Duan. “Evaluation of two automated treatment planning techniques for multiple brain metastases using a single isocenter.” J Radiosurg Sbrt 8, no. 1 (2022): 47–54.
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    • Erickson, Brett G., Bradley G. Ackerson, Chris R. Kelsey, Fang-Fang Yin, Justus Adamson, and Yunfeng Cui. “The Effect of Various Dose Normalization Strategies When Implementing Linear Boltzmann Transport Equation Dose Calculation for Lung Stereotactic Body Radiation Therapy Planning.” Pract Radiat Oncol 12, no. 5 (2022): 446–56. https://doi.org/10.1016/j.prro.2022.02.005.
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    • Ji, Hangjie, Kyle Lafata, Yvonne Mowery, David Brizel, Andrea L. Bertozzi, Fang-Fang Yin, and Chunhao Wang. “Post-Radiotherapy PET Image Outcome Prediction by Deep Learning Under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application.” Front Oncol 12 (2022): 895544. https://doi.org/10.3389/fonc.2022.895544.
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    • Yoo, Sua, Rachel Blitzblau, Susan McDuff, Fang-Fang Yin, and Yunfeng Cui. “Dosimetric variation in preoperative partial breast radiosurgery assessed by deformable image registrations.” J Radiosurg Sbrt 8, no. 3 (2022): 227–35.
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    • Hito, Martin, Wentao Wang, Hunter Stephens, Yibo Xie, Ruilin Li, Fang-Fang Yin, Yaorong Ge, Q Jackie Wu, Qiuwen Wu, and Yang Sheng. “Assessing the robustness of artificial intelligence powered planning tools in radiotherapy clinical settings-a phantom simulation approach.” Quant Imaging Med Surg 11, no. 12 (December 2021): 4835–46. https://doi.org/10.21037/qims-21-51.
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    • Jiang, Zhuoran, Zeyu Zhang, Yushi Chang, Yun Ge, Fang-Fang Yin, and Lei Ren. “Prior image-guided cone-beam computed tomography augmentation from under-sampled projections using a convolutional neural network.” Quant Imaging Med Surg 11, no. 12 (December 2021): 4767–80. https://doi.org/10.21037/qims-21-114.
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    • Sheng, Yang, Jiahan Zhang, Yaorong Ge, Xinyi Li, Wentao Wang, Hunter Stephens, Fang-Fang Yin, Qiuwen Wu, and Q Jackie Wu. “Artificial intelligence applications in intensity modulated radiation treatment planning: an overview.” Quant Imaging Med Surg 11, no. 12 (December 2021): 4859–80. https://doi.org/10.21037/qims-21-208.
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    • Zhang, Lei, Fang-Fang Yin, Tian Li, Xinzhi Teng, Haonan Xiao, Wendy Harris, Lei Ren, et al. “Multi-contrast four-dimensional magnetic resonance imaging (MC-4D-MRI): Development and initial evaluation in liver tumor patients.” Med Phys 48, no. 12 (December 2021): 7984–97. https://doi.org/10.1002/mp.15314.
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    • Li, Xinyi, Q Jackie Wu, Qiuwen Wu, Chunhao Wang, Yang Sheng, Wentao Wang, Hunter Stephens, Fang-Fang Yin, and Yaorong Ge. “Insights of an AI agent via analysis of prediction errors: a case study of fluence map prediction for radiation therapy planning.” Phys Med Biol 66, no. 23 (November 26, 2021). https://doi.org/10.1088/1361-6560/ac3841.
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    • Geng, Huaizhi, Tawfik Giaddui, Chingyun Cheng, Haoyu Zhong, Samuel Ryu, Zhongxing Liao, Fang-Fang Yin, Michael Gillin, Radhe Mohan, and Ying Xiao. “A comparison of two methodologies for radiotherapy treatment plan optimization and QA for clinical trials.” J Appl Clin Med Phys 22, no. 10 (October 2021): 329–37. https://doi.org/10.1002/acm2.13401.
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    • Hanley, Joseph, Sean Dresser, William Simon, Ryan Flynn, Eric E. Klein, Daniel Letourneau, Chihray Liu, et al. “AAPM Task Group 198 Report: An implementation guide for TG 142 quality assurance of medical accelerators.” Med Phys 48, no. 10 (October 2021): e830–85. https://doi.org/10.1002/mp.14992.
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    • Lu, Ke, Lei Ren, and Fang-Fang Yin. “A geometry-guided deep learning technique for CBCT reconstruction.” Phys Med Biol 66, no. 15 (July 30, 2021). https://doi.org/10.1088/1361-6560/ac145b.
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    • Lafata, Kyle J., Yushi Chang, Chunhao Wang, Yvonne M. Mowery, Irina Vergalasova, Donna Niedzwiecki, David S. Yoo, Jian-Guo Liu, David M. Brizel, and Fang-Fang Yin. “Intrinsic radiomic expression patterns after 20 Gy demonstrate early metabolic response of oropharyngeal cancers.” Med Phys 48, no. 7 (July 2021): 3767–77. https://doi.org/10.1002/mp.14926.
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    • Li, Xinyi, Chunhao Wang, Yang Sheng, Jiahan Zhang, Wentao Wang, Fang-Fang Yin, Qiuwen Wu, Q Jackie Wu, and Yaorong Ge. “An artificial intelligence-driven agent for real-time head-and-neck IMRT plan generation using conditional generative adversarial network (cGAN).” Med Phys 48, no. 6 (June 2021): 2714–23. https://doi.org/10.1002/mp.14770.
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    • Chang, Yushi, Zhuoran Jiang, William Paul Segars, Zeyu Zhang, Kyle Lafata, Jing Cai, Fang-Fang Yin, and Lei Ren. “A generative adversarial network (GAN)-based technique for synthesizing realistic respiratory motion in the extended cardiac-torso (XCAT) phantoms.” Phys Med Biol 66, no. 11 (May 31, 2021). https://doi.org/10.1088/1361-6560/ac01b4.
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    • Lafata, Kyle J., Michael N. Corradetti, Junheng Gao, Corbin D. Jacobs, Jingxi Weng, Yushi Chang, Chunhao Wang, et al. “Radiogenomic Analysis of Locally Advanced Lung Cancer Based on CT Imaging and Intratreatment Changes in Cell-Free DNA.” Radiol Imaging Cancer 3, no. 4 (April 2021): e200157. https://doi.org/10.1148/rycan.2021200157.
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    • Zhang, Jiahan, Chunhao Wang, Yang Sheng, Manisha Palta, Brian Czito, Christopher Willett, Jiang Zhang, et al. “An Interpretable Planning Bot for Pancreas Stereotactic Body Radiation Therapy.” Int J Radiat Oncol Biol Phys 109, no. 4 (March 15, 2021): 1076–85. https://doi.org/10.1016/j.ijrobp.2020.10.019.
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    • Zhang, Zeyu, Mi Huang, Zhuoran Jiang, Yushi Chang, Jordan Torok, Fang-Fang Yin, and Lei Ren. “4D radiomics: impact of 4D-CBCT image quality on radiomic analysis.” Phys Med Biol 66, no. 4 (February 11, 2021): 045023. https://doi.org/10.1088/1361-6560/abd668.
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    • Arsenault, Theodore, Fang Fang Yin, Junzo Chino, Oana Craciunescu, and Jim Zheng Chang. “Evaluation of eddy current distortion and field inhomogeneity distortion corrections in MR diffusion imaging using log-demons DIR method.” Phys Med Biol 66, no. 3 (January 29, 2021): 035021. https://doi.org/10.1088/1361-6560/abcb20.
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    • Jiang, Zhuoran, Fang-Fang Yin, Yun Ge, and Lei Ren. “Enhancing digital tomosynthesis (DTS) for lung radiotherapy guidance using patient-specific deep learning model.” Phys Med Biol 66, no. 3 (January 26, 2021): 035009. https://doi.org/10.1088/1361-6560/abcde8.
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    • Han, Silu, Xiao Liang, Tian Li, Fang-Fang Yin, and Jing Cai. “Slice-stacking T2-weighted MRI for fast determination of internal target volume for liver tumor.” Quant Imaging Med Surg 11, no. 1 (January 2021): 32–42. https://doi.org/10.21037/qims-20-41.
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    • Kim, Grace J., Evan D. Buckley, James E. Herndon, Karen J. Allen, Tyketra S. Dale, Justus D. Adamson, Lam Lay, et al. “Outcomes in Patients With 4 to 10 Brain Metastases Treated With Dose-Adapted Single-Isocenter Multitarget Stereotactic Radiosurgery: A Prospective Study.” Adv Radiat Oncol 6, no. 6 (2021): 100760. https://doi.org/10.1016/j.adro.2021.100760.
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    • Wang, Wentao, Yang Sheng, Manisha Palta, Brian Czito, Christopher Willett, Martin Hito, Fang-Fang Yin, Qiuwen Wu, Yaorong Ge, and Q Jackie Wu. “Deep Learning-Based Fluence Map Prediction for Pancreas Stereotactic Body Radiation Therapy With Simultaneous Integrated Boost.” Adv Radiat Oncol 6, no. 4 (2021): 100672. https://doi.org/10.1016/j.adro.2021.100672.
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    • Yoo, Sua, Yang Sheng, Rachel Blitzblau, Susan McDuff, Colin Champ, Jay Morrison, Leigh O’Neill, Suzanne Catalano, Fang-Fang Yin, and Q Jackie Wu. “Clinical Experience With Machine Learning-Based Automated Treatment Planning for Whole Breast Radiation Therapy.” Adv Radiat Oncol 6, no. 2 (2021): 100656. https://doi.org/10.1016/j.adro.2021.100656.
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    • Liu, C., K. Lafata, Y. Chang, F. F. Yin, and C. Wang. “RETRACTED: An Encoder-Decoder Based Deep Learning AI agent for Spatial Dose Distribution Prediction: A Study of Complex Head-and-Neck IMRT Application.” Int J Radiat Oncol Biol Phys 108, no. 3S (November 1, 2020): S128. https://doi.org/10.1016/j.ijrobp.2020.07.854.
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    • Liu, Chenyang, Shen-Chiang Hu, Chunhao Wang, Kyle Lafata, and Fang-Fang Yin. “Automatic detection of pulmonary nodules on CT images with YOLOv3: development and evaluation using simulated and patient data.” Quant Imaging Med Surg 10, no. 10 (October 2020): 1917–29. https://doi.org/10.21037/qims-19-883.
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    • Liu, Chenyang, Shen-Chiang Hu, Chunhao Wang, Kyle Lafata, and Fang-Fang Yin. “Automatic detection of pulmonary nodules on CT images with YOLOv3: development and evaluation using simulated and patient data.” Quantitative Imaging in Medicine and Surgery 10, no. 10 (October 2020): 1917–29.
    • Sun, Wenzheng, Qichun Wei, Lei Ren, Jun Dang, and Fang-Fang Yin. “Adaptive respiratory signal prediction using dual multi-layer perceptron neural networks.” Phys Med Biol 65, no. 18 (September 14, 2020): 185005. https://doi.org/10.1088/1361-6560/abb170.
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    • Li, Xinyi, Jiahan Zhang, Yang Sheng, Yushi Chang, Fang-Fang Yin, Yaorong Ge, Q Jackie Wu, and Chunhao Wang. “Automatic IMRT planning via static field fluence prediction (AIP-SFFP): a deep learning algorithm for real-time prostate treatment planning.” Phys Med Biol 65, no. 17 (September 8, 2020): 175014. https://doi.org/10.1088/1361-6560/aba5eb.
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    • Cui, Yunfeng, Hao Gao, Jiahan Zhang, John P. Kirkpatrick, and Fang-Fang Yin. “Retrospective quality metrics review of stereotactic radiosurgery plans treating multiple targets using single-isocenter volumetric modulated arc therapy.” J Appl Clin Med Phys 21, no. 6 (June 2020): 93–99. https://doi.org/10.1002/acm2.12869.
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    • Zhang, Jiahan, Yaorong Ge, Yang Sheng, Chunhao Wang, Jiang Zhang, Yuan Wu, Qiuwen Wu, Fang-Fang Yin, and Q Jackie Wu. “Knowledge-Based Tradeoff Hyperplanes for Head and Neck Treatment Planning.” Int J Radiat Oncol Biol Phys 106, no. 5 (April 1, 2020): 1095–1103. https://doi.org/10.1016/j.ijrobp.2019.12.034.
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    • Chang, Yushi, Kyle Lafata, William Paul Segars, Fang-Fang Yin, and Lei Ren. “Development of realistic multi-contrast textured XCAT (MT-XCAT) phantoms using a dual-discriminator conditional-generative adversarial network (D-CGAN).” Phys Med Biol 65, no. 6 (March 19, 2020): 065009. https://doi.org/10.1088/1361-6560/ab7309.
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    • Chang, Yushi, Kyle Lafata, Chunhao Wang, Xiaoyu Duan, Ruiqi Geng, Zhenyu Yang, and Fang-Fang Yin. “Digital phantoms for characterizing inconsistencies among radiomics extraction toolboxes.” Biomed Phys Eng Express 6, no. 2 (March 2, 2020): 025016. https://doi.org/10.1088/2057-1976/ab779c.
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    • Yang, Zi, Lei Ren, Fang-Fang Yin, Xiao Liang, and Jing Cai. “Motion robust 4D-MRI sorting based on anatomic feature matching: A digital phantom simulation study.” Radiat Med Prot 1, no. 1 (March 2020): 41–47. https://doi.org/10.1016/j.radmp.2020.01.003.
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    • Harris, Wendy, Fang-Fang Yin, Jing Cai, and Lei Ren. “Volumetric cine magnetic resonance imaging (VC-MRI) using motion modeling, free-form deformation and multi-slice undersampled 2D cine MRI reconstructed with spatio-temporal low-rank decomposition.” Quant Imaging Med Surg 10, no. 2 (February 2020): 432–50. https://doi.org/10.21037/qims.2019.12.10.
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    • Jiang, Zhuoran, Fang-Fang Yin, Yun Ge, and Lei Ren. “A multi-scale framework with unsupervised joint training of convolutional neural networks for pulmonary deformable image registration.” Phys Med Biol 65, no. 1 (January 13, 2020): 015011. https://doi.org/10.1088/1361-6560/ab5da0.
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    • Cui, Guoqiang, Jun Duan, Yun Yang, and Fang-Fang Yin. “Technical Note: Investigation of the dosimetric impact of stray radiation on the Common Control Unit of the IBA Blue Phantom2.” J Appl Clin Med Phys 21, no. 1 (January 2020): 191–96. https://doi.org/10.1002/acm2.12769.
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    • Chetvertkov, Mikhail, James Ira Monroe, Jaskaran Boparai, Timothy D. Solberg, Deanna H. Pafundi, Russell L. Ruo, David J. Gladstone, et al. “NRG Oncology Survey on Practice and Technology Use in SRT and SBRT Delivery.” Front Oncol 10 (2020): 602607. https://doi.org/10.3389/fonc.2020.602607.
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    • Mistro, Matt, Yang Sheng, Yaorong Ge, Chris R. Kelsey, Jatinder R. Palta, Jing Cai, Qiuwen Wu, Fang-Fang Yin, and Q Jackie Wu. “Knowledge Models as Teaching Aid for Training Intensity Modulated Radiation Therapy Planning: A Lung Cancer Case Study.” Front Artif Intell 3 (2020): 66. https://doi.org/10.3389/frai.2020.00066.
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    • Wang, Chunhao, Chenyang Liu, Yushi Chang, Kyle Lafata, Yunfeng Cui, Jiahan Zhang, Yang Sheng, Yvonne Mowery, David Brizel, and Fang-Fang Yin. “Dose-Distribution-Driven PET Image-Based Outcome Prediction (DDD-PIOP): A Deep Learning Study for Oropharyngeal Cancer IMRT Application.” Front Oncol 10 (2020): 1592. https://doi.org/10.3389/fonc.2020.01592.
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    • Wang, Wentao, Yang Sheng, Chunhao Wang, Jiahan Zhang, Xinyi Li, Manisha Palta, Brian Czito, et al. “Fluence Map Prediction Using Deep Learning Models - Direct Plan Generation for Pancreas Stereotactic Body Radiation Therapy.” Front Artif Intell 3 (2020): 68. https://doi.org/10.3389/frai.2020.00068.
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    • Yoo, Sua, Jennifer O’Daniel, Rachel Blitzblau, Fang-Fang Yin, and Janet K. Horton. “Accuracy and efficiency of image-guided radiation therapy (IGRT) for preoperative partial breast radiosurgery.” J Radiosurg Sbrt 6, no. 4 (2020): 295–301.
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    • Jiang, Zhuoran, Yingxuan Chen, Yawei Zhang, Yun Ge, Fang-Fang Yin, and Lei Ren. “Augmentation of CBCT Reconstructed From Under-Sampled Projections Using Deep Learning.” Ieee Trans Med Imaging 38, no. 11 (November 2019): 2705–15. https://doi.org/10.1109/TMI.2019.2912791.
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    • Chen, Yingxuan, Fang-Fang Yin, Zhuoran Jiang, and Lei Ren. “Daily edge deformation prediction using an unsupervised convolutional neural network model for low dose prior contour based total variation CBCT reconstruction (PCTV-CNN).” Biomed Phys Eng Express 5, no. 6 (October 2019). https://doi.org/10.1088/2057-1976/ab446b.
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    • Das, Shiva K., Ross McGurk, Moyed Miften, Sasa Mutic, James Bowsher, John Bayouth, Yusuf Erdi, et al. “Task Group 174 Report: Utilization of [18 F]Fluorodeoxyglucose Positron Emission Tomography ([18 F]FDG-PET) in Radiation Therapy.” Med Phys 46, no. 10 (October 2019): e706–25. https://doi.org/10.1002/mp.13676.
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    • Hartgerink, Dianne, Ans Swinnen, David Roberge, Alan Nichol, Piotr Zygmanski, Fang-Fang Yin, François Deblois, et al. “LINAC based stereotactic radiosurgery for multiple brain metastases: guidance for clinical implementation.” Acta Oncol 58, no. 9 (September 2019): 1275–82. https://doi.org/10.1080/0284186X.2019.1633016.
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    • Zhang, Jiahan, Yaorong Ge, Yang Sheng, Fang-Fang Yin, and Q Jackie Wu. “Modeling of multiple planning target volumes for head and neck treatments in knowledge-based treatment planning.” Med Phys 46, no. 9 (September 2019): 3812–22. https://doi.org/10.1002/mp.13679.
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    • Pham, Jonathan, Wendy Harris, Wenzheng Sun, Zi Yang, Fang-Fang Yin, and Lei Ren. “Predicting real-time 3D deformation field maps (DFM) based on volumetric cine MRI (VC-MRI) and artificial neural networks for on-board 4D target tracking: a feasibility study.” Phys Med Biol 64, no. 16 (August 21, 2019): 165016. https://doi.org/10.1088/1361-6560/ab359a.
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    • Lafata, Kyle J., Zhennan Zhou, Jian-Guo Liu, Julian Hong, Chris R. Kelsey, and Fang-Fang Yin. “An Exploratory Radiomics Approach to Quantifying Pulmonary Function in CT Images.” Sci Rep 9, no. 1 (August 8, 2019): 11509. https://doi.org/10.1038/s41598-019-48023-5.
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    • Chen, Yingxuan, Fang-Fang Yin, Yawei Zhang, You Zhang, and Lei Ren. “Low dose cone-beam computed tomography reconstruction via hybrid prior contour based total variation regularization (hybrid-PCTV).” Quant Imaging Med Surg 9, no. 7 (July 2019): 1214–28. https://doi.org/10.21037/qims.2019.06.02.
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    • Liang, Xiao, Fang-Fang Yin, Chunhao Wang, and Jing Cai. “A robust deformable image registration enhancement method based on radial basis function.” Quant Imaging Med Surg 9, no. 7 (July 2019): 1315–25. https://doi.org/10.21037/qims.2019.07.05.
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    • Sun, Duohua, Xiao Liang, Fangfang Yin, and Jing Cai. “Probability-based 3D k-space sorting for motion robust 4D-MRI.” Quant Imaging Med Surg 9, no. 7 (July 2019): 1326–36. https://doi.org/10.21037/qims.2019.07.06.
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    • Hu, Lei, Qijie Huang, Taoran Cui, Isabella Duarte, G Wilson Miller, John P. Mugler, Gordon D. Cates, et al. “A hybrid proton and hyperpolarized gas tagging MRI technique for lung respiratory motion imaging: a feasibility study.” Phys Med Biol 64, no. 10 (May 16, 2019): 105019. https://doi.org/10.1088/1361-6560/ab160c.
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    • Zhang, Yawei, Fang-Fang Yin, and Lei Ren. “First clinical retrospective investigation of limited projection CBCT for lung tumor localization in patients receiving SBRT treatment.” Phys Med Biol 64, no. 10 (May 8, 2019): 10NT01. https://doi.org/10.1088/1361-6560/ab1c0c.
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    • Wang, Xiaojun, Jason Tucciarone, Siqi Jiang, Fangfang Yin, Bor-Shuen Wang, Dingkang Wang, Yao Jia, et al. “Genetic Single Neuron Anatomy Reveals Fine Granularity of Cortical Axo-Axonic Cells.” Cell Rep 26, no. 11 (March 12, 2019): 3145-3159.e5. https://doi.org/10.1016/j.celrep.2019.02.040.
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    • Wang, Chunhao, Ergys Subashi, Fang-Fang Yin, Zheng Chang, and Jing Cai. “A Spatiotemporal-Constrained Sorting Method for Motion-Robust 4D-MRI: A Feasibility Study.” Int J Radiat Oncol Biol Phys 103, no. 3 (March 1, 2019): 758–66. https://doi.org/10.1016/j.ijrobp.2018.10.004.
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    • Han, Silu, Fang-Fang Yin, and Jing Cai. “Evaluation of dosimetric uncertainty caused by MR geometric distortion in MRI-based liver SBRT treatment planning.” J Appl Clin Med Phys 20, no. 2 (February 2019): 43–50. https://doi.org/10.1002/acm2.12520.
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    • Lafata, Kyle J., Julian C. Hong, Ruiqi Geng, Bradley G. Ackerson, Jian-Guo Liu, Zhennan Zhou, Jordan Torok, Chris R. Kelsey, and Fang-Fang Yin. “Association of pre-treatment radiomic features with lung cancer recurrence following stereotactic body radiation therapy.” Phys Med Biol 64, no. 2 (January 8, 2019): 025007. https://doi.org/10.1088/1361-6560/aaf5a5.
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    • Chang, Yushi, Kyle Lafata, Wenzheng Sun, Chunhao Wang, Zheng Chang, John P. Kirkpatrick, and Fang-Fang Yin. “An investigation of machine learning methods in delta-radiomics feature analysis.” Plos One 14, no. 12 (2019): e0226348. https://doi.org/10.1371/journal.pone.0226348.
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    • Abisheva, Zhanerke, Scott R. Floyd, Joseph K. Salama, John Kirkpatrick, Fang-Fang Yin, Michael J. Moravan, William Giles, and Justus Adamson. “The effect of MLC leaf width in single-isocenter multi-target radiosurgery with volumetric modulated arc therapy.” J Radiosurg Sbrt 6, no. 2 (2019): 131–38.
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    • Duan, Xiaoyu, William Giles, John P. Kirkpatrick, and Fang-Fang Yin. “The effect of setup uncertainty on optimal dosimetric margin in LINAC-based stereotactic radiosurgery with dynamic conformal arc technique.” J Radiosurg Sbrt 6, no. 1 (2019): 55–65.
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    • Gao, Hao, Chris R. Kelsey, John Boyle, Tianyi Xie, Suzanne Catalano, Xiaofei Wang, and Fang-Fang Yin. “Impact of Esophageal Motion on Dosimetry and Toxicity With Thoracic Radiation Therapy.” Technol Cancer Res Treat 18 (2019): 1533033819849073. https://doi.org/10.1177/1533033819849073.
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    • Lafata, K., Z. Zhou, J. G. Liu, and F. F. Yin. “Data clustering based on Langevin annealing with a self-consistent potential.” Quarterly of Applied Mathematics 77, no. 3 (January 1, 2019): 591–613. https://doi.org/10.1090/qam/1521.
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    • Sheng, Yang, Jiahan Zhang, Chunhao Wang, Fang-Fang Yin, Q Jackie Wu, and Yaorong Ge. “Incorporating Case-Based Reasoning for Radiation Therapy Knowledge Modeling: A Pelvic Case Study.” Technol Cancer Res Treat 18 (January 1, 2019): 1533033819874788. https://doi.org/10.1177/1533033819874788.
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    • Sheng, Yang, Taoran Li, Sua Yoo, Fang-Fang Yin, Rachel Blitzblau, Janet K. Horton, Yaorong Ge, and Q Jackie Wu. “Automatic Planning of Whole Breast Radiation Therapy Using Machine Learning Models.” Front Oncol 9 (2019): 750. https://doi.org/10.3389/fonc.2019.00750.
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    • Wang, Wentao, Yang Sheng, Sua Yoo, Rachel C. Blitzblau, Fang-Fang Yin, and Q Jackie Wu. “Goal-Driven Beam Setting Optimization for Whole-Breast Radiation Therapy.” Technol Cancer Res Treat 18 (January 1, 2019): 1533033819858661. https://doi.org/10.1177/1533033819858661.
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    • Zhang, Jiang, Q Jackie Wu, Yaorong Ge, Chunhao Wang, Yang Sheng, Jatinder Palta, Joseph K. Salama, Fang-Fang Yin, and Jiahan Zhang. “Knowledge-Based Statistical Inference Method for Plan Quality Quantification.” Technol Cancer Res Treat 18 (January 1, 2019): 1533033819857758. https://doi.org/10.1177/1533033819857758.
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    • Cui, Taoran, G Wilson Miller, John P. Mugler, Gordon D. Cates, Jaime F. Mata, Eduard E. de Lange, Qijie Huang, Talissa A. Altes, Fang-Fang Yin, and Jing Cai. “An initial investigation of hyperpolarized gas tagging magnetic resonance imaging in evaluating deformable image registration-based lung ventilation.” Med Phys 45, no. 12 (December 2018): 5535–42. https://doi.org/10.1002/mp.13223.
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    • Hong, Julian C., Yunfeng Cui, Bhavik N. Patel, Christel N. Rushing, Austin M. Faught, Jared S. Eng, Kyle Higgins, et al. “Association of Interim FDG-PET Imaging During Chemoradiation for Squamous Anal Canal Carcinoma With Recurrence.” Int J Radiat Oncol Biol Phys 102, no. 4 (November 15, 2018): 1046–51. https://doi.org/10.1016/j.ijrobp.2018.04.062.
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    • Lafata, Kyle, Jing Cai, Chunhao Wang, Julian Hong, Chris R. Kelsey, and Fang-Fang Yin. “Spatial-temporal variability of radiomic features and its effect on the classification of lung cancer histology.” Phys Med Biol 63, no. 22 (November 8, 2018): 225003. https://doi.org/10.1088/1361-6560/aae56a.
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    • Sun, Wenzheng, Mingyan Jiang, Jun Dang, Panchun Chang, and Fang-Fang Yin. “Effect of machine learning methods on predicting NSCLC overall survival time based on Radiomics analysis.” Radiat Oncol 13, no. 1 (October 5, 2018): 197. https://doi.org/10.1186/s13014-018-1140-9.
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    • Yuan, Lulin, Wei Zhu, Yaorong Ge, Yuliang Jiang, Yang Sheng, Fang-Fang Yin, and Q Jackie Wu. “Lung IMRT planning with automatic determination of beam angle configurations.” Phys Med Biol 63, no. 13 (July 6, 2018): 135024. https://doi.org/10.1088/1361-6560/aac8b4.
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    • Dubey, Abhishek, Alexandros-Stavros Iliopoulos, Xiaobai Sun, Fang-Fang Yin, and Lei Ren. “Iterative inversion of deformation vector fields with feedback control.” Med Phys 45, no. 7 (July 2018): 3147–60. https://doi.org/10.1002/mp.12962.
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    • Harris, Wendy, Chunhao Wang, Fang-Fang Yin, Jing Cai, and Lei Ren. “A Novel method to generate on-board 4D MRI using prior 4D MRI and on-board kV projections from a conventional LINAC for target localization in liver SBRT.” Med Phys 45, no. 7 (July 2018): 3238–45. https://doi.org/10.1002/mp.12998.
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    • Chen, Yingxuan, Fang-Fang Yin, Yawei Zhang, You Zhang, and Lei Ren. “Low dose CBCT reconstruction via prior contour based total variation (PCTV) regularization: a feasibility study.” Phys Med Biol 63, no. 8 (April 19, 2018): 085014. https://doi.org/10.1088/1361-6560/aab68d.
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    • Younge, Kelly C., Robin B. Marsh, Dawn Owen, Huaizhi Geng, Ying Xiao, Daniel E. Spratt, Joseph Foy, et al. “Improving Quality and Consistency in NRG Oncology Radiation Therapy Oncology Group 0631 for Spine Radiosurgery via Knowledge-Based Planning.” Int J Radiat Oncol Biol Phys 100, no. 4 (March 15, 2018): 1067–74. https://doi.org/10.1016/j.ijrobp.2017.12.276.
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    • Segars, W Paul, B. M. W. Tsui, B. M. W. Jing Cai, B. M. W. Fang-Fang Yin, George S. K. Fung, and Ehsan Samei. “Application of the 4-D XCAT Phantoms in Biomedical Imaging and Beyond.” Ieee Trans Med Imaging 37, no. 3 (March 2018): 680–92. https://doi.org/10.1109/TMI.2017.2738448.
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    • Gao, Hao, Yawei Zhang, Lei Ren, and Fang-Fang Yin. “Principal component reconstruction (PCR) for cine CBCT with motion learning from 2D fluoroscopy.” Med Phys 45, no. 1 (January 2018): 167–77. https://doi.org/10.1002/mp.12671.
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    • Lee, Sung-Woo, Evgeny Sozontov, Emil Strumban, and Fang-Fang Yin. “Dosimetric Characterization of an Intensity-modulated X-Ray Brachytherapy System.” J Med Phys 43, no. 4 (2018): 247–54. https://doi.org/10.4103/jmp.JMP_52_18.
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    • Wang, Chunhao, Wenzheng Sun, John Kirkpatrick, Zheng Chang, and Fang-Fang Yin. “Assessment of concurrent stereotactic radiosurgery and bevacizumab treatment of recurrent malignant gliomas using multi-modality MRI imaging and radiomics analysis.” J Radiosurg Sbrt 5, no. 3 (2018): 171–81.
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    • Zhang, Jiahan, Q Jackie Wu, Tianyi Xie, Yang Sheng, Fang-Fang Yin, and Yaorong Ge. “An Ensemble Approach to Knowledge-Based Intensity-Modulated Radiation Therapy Planning.” Front Oncol 8 (2018): 57. https://doi.org/10.3389/fonc.2018.00057.
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    • Zhang, Yawei, Xinchen Deng, Fang-Fang Yin, and Lei Ren. “Image acquisition optimization of a limited-angle intrafraction verification (LIVE) system for lung radiotherapy.” Med Phys 45, no. 1 (January 2018): 340–51. https://doi.org/10.1002/mp.12647.
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    • Harris, Wendy, Fang-Fang Yin, Chunhao Wang, You Zhang, Jing Cai, and Lei Ren. “Accelerating volumetric cine MRI (VC-MRI) using undersampling for real-time 3D target localization/tracking in radiation therapy: a feasibility study.” Phys Med Biol 63, no. 1 (December 14, 2017): 01NT01. https://doi.org/10.1088/1361-6560/aa9746.
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    • Adamson, Justus D., Tabitha Cooney, Farokh Demehri, Andrew Stalnecker, Debra Georgas, Fang-Fang Yin, and John Kirkpatrick. “Characterization of Water-Clear Polymeric Gels for Use as Radiotherapy Bolus.” Technol Cancer Res Treat 16, no. 6 (December 2017): 923–29. https://doi.org/10.1177/1533034617710579.
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    • Mao, Ronghu, Lingling Tian, You Zhang, Lei Ren, Renqi Gao, Fang-Fang Yin, and Hong Ge. “Dosimetric Analysis of Microscopic Disease in SBRT for Lung Cancers.” Technol Cancer Res Treat 16, no. 6 (December 2017): 1113–19. https://doi.org/10.1177/1533034617734689.
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    • Wang, Chunhao, Fang-Fang Yin, W. P. Segars, Zheng Chang, and Lei Ren. “Development of a Computerized 4-D MRI Phantom for Liver Motion Study.” Technol Cancer Res Treat 16, no. 6 (December 2017): 1051–59. https://doi.org/10.1177/1533034617723753.
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    • Zhang, You, Lei Ren, Irina Vergalasova, and Fang-Fang Yin. “Clinical Study of Orthogonal-View Phase-Matched Digital Tomosynthesis for Lung Tumor Localization.” Technol Cancer Res Treat 16, no. 6 (December 2017): 866–78. https://doi.org/10.1177/1533034617705716.
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    • Sheng, Yang, Yaorong Ge, Lulin Yuan, Taoran Li, Fang-Fang Yin, and Qingrong Jackie Wu. “Outlier identification in radiation therapy knowledge-based planning: A study of pelvic cases.” Med Phys 44, no. 11 (November 2017): 5617–26. https://doi.org/10.1002/mp.12556.
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    • Narloch, Jessica L., S Harrison Farber, Sarah Sammons, Frances McSherry, James E. Herndon, Jenny K. Hoang, Fang-Fang Yin, et al. “Biopsy of enlarging lesions after stereotactic radiosurgery for brain metastases frequently reveals radiation necrosis.” Neuro Oncol 19, no. 10 (October 1, 2017): 1391–97. https://doi.org/10.1093/neuonc/nox090.
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    • Halvorsen, Per H., Eileen Cirino, Indra J. Das, Jeffrey A. Garrett, Jun Yang, Fang-Fang Yin, and Lynne A. Fairobent. “AAPM-RSS Medical Physics Practice Guideline 9.a. for SRS-SBRT.” J Appl Clin Med Phys 18, no. 5 (September 2017): 10–21. https://doi.org/10.1002/acm2.12146.
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    • Sun, W. Z., M. Y. Jiang, L. Ren, J. Dang, T. You, and F. -. F. Yin. “Respiratory signal prediction based on adaptive boosting and multi-layer perceptron neural network.” Phys Med Biol 62, no. 17 (August 3, 2017): 6822–35. https://doi.org/10.1088/1361-6560/aa7cd4.
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    • Wang, Chunhao, Fang-Fang Yin, John P. Kirkpatrick, and Zheng Chang. “Accelerated Brain DCE-MRI Using Iterative Reconstruction With Total Generalized Variation Penalty for Quantitative Pharmacokinetic Analysis: A Feasibility Study.” Technol Cancer Res Treat 16, no. 4 (August 2017): 446–60. https://doi.org/10.1177/1533034616649294.
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    • Sheng, Yang, Taoran Li, W Robert Lee, Fang-Fang Yin, and Q Jackie Wu. “Exploring the Margin Recipe for Online Adaptive Radiation Therapy for Intermediate-Risk Prostate Cancer: An Intrafractional Seminal Vesicles Motion Analysis.” Int J Radiat Oncol Biol Phys 98, no. 2 (June 1, 2017): 473–80. https://doi.org/10.1016/j.ijrobp.2017.02.089.
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    • Zhang, Yawei, Fang-Fang Yin, You Zhang, and Lei Ren. “Reducing scan angle using adaptive prior knowledge for a limited-angle intrafraction verification (LIVE) system for conformal arc radiotherapy.” Phys Med Biol 62, no. 9 (May 7, 2017): 3859–82. https://doi.org/10.1088/1361-6560/aa6913.
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    • O’Daniel, Jennifer C., and Fang-Fang Yin. “Quantitative Approach to Failure Mode and Effect Analysis for Linear Accelerator Quality Assurance.” Int J Radiat Oncol Biol Phys 98, no. 1 (May 1, 2017): 56–62. https://doi.org/10.1016/j.ijrobp.2017.01.035.
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    • Liu, Yilin, Fang-Fang Yin, Brian G. Czito, Mustafa R. Bashir, Manisha Palta, and Jing Cai. “Retrospective four-dimensional magnetic resonance imaging with image-based respiratory surrogate: a sagittal-coronal-diaphragm point of intersection motion tracking method.” J Med Imaging (Bellingham) 4, no. 2 (April 2017): 024007. https://doi.org/10.1117/1.JMI.4.2.024007.
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    • Harris, Wendy, You Zhang, Fang-Fang Yin, and Lei Ren. “Estimating 4D-CBCT from prior information and extremely limited angle projections using structural PCA and weighted free-form deformation for lung radiotherapy.” Med Phys 44, no. 3 (March 2017): 1089–1104. https://doi.org/10.1002/mp.12102.
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    • Liu, Yilin, Xiaodong Zhong, Brian G. Czito, Manisha Palta, Mustafa R. Bashir, Brian M. Dale, Fang-Fang Yin, and Jing Cai. “Four-dimensional diffusion-weighted MR imaging (4D-DWI): a feasibility study.” Med Phys 44, no. 2 (February 2017): 397–406. https://doi.org/10.1002/mp.12037.
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    • Cui, Yunfeng, James Bowsher, Jing Cai, and Fang-Fang Yin. “Impact of moving target on measurement accuracy in 3D and 4D PET imaging-a phantom study.” Adv Radiat Oncol 2, no. 1 (2017): 94–100. https://doi.org/10.1016/j.adro.2016.12.002.
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    • Faught, Austin M., Fang-Fang Yin, and Justus Adamson. “An in-house protocol for improved flood field calibration of TrueBeam FFF cine imaging.” J Appl Clin Med Phys 18, no. 1 (January 2017): 265–68. https://doi.org/10.1002/acm2.12023.
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    • Limon, Dror, Frances McSherry, James Herndon, John Sampson, Peter Fecci, Justus Adamson, Zhiheng Wang, et al. “Single fraction stereotactic radiosurgery for multiple brain metastases.” Adv Radiat Oncol 2, no. 4 (2017): 555–63. https://doi.org/10.1016/j.adro.2017.09.002.
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    • Zhang, Lei, Yawei Zhang, You Zhang, Wendy B. Harris, Fang-Fang Yin, Jing Cai, and Lei Ren. “Markerless Four-Dimensional-Cone Beam Computed Tomography Projection-Phase Sorting Using Prior Knowledge and Patient Motion Modeling: A Feasibility Study.” Cancer Transl Med 3, no. 6 (2017): 185–93.
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    • Liang, Xiao, Fang-Fang Yin, Yilin Liu, and Jing Cai. “A probability-based multi-cycle sorting method for 4D-MRI: A simulation study.” Med Phys 43, no. 12 (December 2016): 6375. https://doi.org/10.1118/1.4966705.
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    • Xin-Ye, Ni, Lei Ren, Hui Yan, and Fang-Fang Yin. “Sensitivity of 3D Dose Verification to Multileaf Collimator Misalignments in Stereotactic Body Radiation Therapy of Spinal Tumor.” Technol Cancer Res Treat 15, no. 6 (December 2016): NP25–34. https://doi.org/10.1177/1533034615610251.
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    • Liang, Bin, Bo Liu, Fugen Zhou, Fang-Fang Yin, and Qiuwen Wu. “Comparisons of volumetric modulated arc therapy (VMAT) quality assurance (QA) systems: sensitivity analysis to machine errors.” Radiat Oncol 11, no. 1 (November 7, 2016): 146. https://doi.org/10.1186/s13014-016-0725-4.
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    • Dang, Jun, Fang-Fang Yin, Tao You, Chunhua Dai, Deyu Chen, and Jing Wang. “Simultaneous 4D-CBCT reconstruction with sliding motion constraint.” Med Phys 43, no. 10 (October 2016): 5453. https://doi.org/10.1118/1.4959998.
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    • Faught, Austin M., Michael Trager, Fang-Fang Yin, John Kirkpatrick, and Justus Adamson. “Re-examining TG-142 recommendations in light of modern techniques for linear accelerator based radiosurgery.” Med Phys 43, no. 10 (October 2016): 5437. https://doi.org/10.1118/1.4962471.
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    • Wang, Chunhao, Janet K. Horton, Fang-Fang Yin, and Zheng Chang. “Assessment of Treatment Response With Diffusion-Weighted MRI and Dynamic Contrast-Enhanced MRI in Patients With Early-Stage Breast Cancer Treated With Single-Dose Preoperative Radiotherapy: Initial Results.” Technol Cancer Res Treat 15, no. 5 (October 2016): 651–60. https://doi.org/10.1177/1533034615593191.
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    • Li, Taoran, Q Jackie Wu, Thomas Matzen, Fang-Fang Yin, and Jennifer C. O’Daniel. “Diode-based transmission detector for IMRT delivery monitoring: a validation study.” J Appl Clin Med Phys 17, no. 5 (September 8, 2016): 235–44. https://doi.org/10.1120/jacmp.v17i5.6204.
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    • Li, Taoran, Q Jackie Wu, Thomas Matzen, Fang-Fang Yin, and Jennifer C. O’Daniel. “Diode-based transmission detector for IMRT delivery monitoring: a validation study.” J Appl Clin Med Phys 17, no. 5 (September 2016): 1–10. https://doi.org/10.1120/jacmp.v17i5.6204.
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    • Wang, Chunhao, Ergys Subashi, Xiao Liang, Fang-Fang Yin, and Zheng Chang. “Evaluation of the effect of transcytolemmal water exchange analysis for therapeutic response assessment using DCE-MRI: a comparison study.” Phys Med Biol 61, no. 13 (July 7, 2016): 4763–80. https://doi.org/10.1088/0031-9155/61/13/4763.
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    • Ren, Lei, Yingxuan Chen, You Zhang, William Giles, Jianyue Jin, and Fang-Fang Yin. “Scatter Reduction and Correction for Dual-Source Cone-Beam CT Using Prepatient Grids.” Technol Cancer Res Treat 15, no. 3 (June 2016): 416–27. https://doi.org/10.1177/1533034615587615.
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    • Harris, Wendy, Lei Ren, Jing Cai, You Zhang, Zheng Chang, and Fang-Fang Yin. “A Technique for Generating Volumetric Cine-Magnetic Resonance Imaging.” Int J Radiat Oncol Biol Phys 95, no. 2 (June 1, 2016): 844–53. https://doi.org/10.1016/j.ijrobp.2016.02.011.
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    • Wang, Chunhao, Ergys Subashi, Fang-Fang Yin, and Zheng Chang. “Dynamic fractal signature dissimilarity analysis for therapeutic response assessment using dynamic contrast-enhanced MRI.” Med Phys 43, no. 3 (March 2016): 1335–47. https://doi.org/10.1118/1.4941739.
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    • Wang, Chunhao, Fang-Fang Yin, and Zheng Chang. “An efficient calculation method for pharmacokinetic parameters in brain permeability study using dynamic contrast-enhanced MRI.” Magn Reson Med 75, no. 2 (February 2016): 739–49. https://doi.org/10.1002/mrm.25659.
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    • McVicker, Drew, Fang-Fang Yin, and Justus D. Adamson. “On the sensitivity of TG-119 and IROC credentialing to TPS commissioning errors.” J Appl Clin Med Phys 17, no. 1 (January 8, 2016): 34–48. https://doi.org/10.1120/jacmp.v17i1.5452.
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    • Liu, Yilin, Fang-Fang Yin, DongJoo Rhee, and Jing Cai. “Accuracy of respiratory motion measurement of 4D-MRI: A comparison between cine and sequential acquisition.” Med Phys 43, no. 1 (January 2016): 179. https://doi.org/10.1118/1.4938066.
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    • Deng, Jun, Yuanming Feng, Charlie Ma, and Fang-Fang Yin. “Novel Technologies for Improved Treatment Outcome and Patient Safety in Cancer Radiotherapy.” Biomed Res Int 2016 (2016): 3016454. https://doi.org/10.1155/2016/3016454.
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    • McVicker, Drew, Fang-Fang Yin, and Justus D. Adamson. “On the sensitivity of TG-119 and IROC credentialing to TPS commissioning errors.” J Appl Clin Med Phys 17, no. 1 (January 2016): 34–48. https://doi.org/10.1120/jacmp.v17i1.5452.
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    • Sheng, Yang, Taoran Li, You Zhang, W Robert Lee, Fang-Fang Yin, Yaorong Ge, and Q Jackie Wu. “Atlas-guided prostate intensity modulated radiation therapy (IMRT) planning.” Phys Med Biol 60, no. 18 (September 21, 2015): 7277–91. https://doi.org/10.1088/0031-9155/60/18/7277.
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    • Liu, Yilin, Fang-Fang Yin, Brian G. Czito, Mustafa R. Bashir, and Jing Cai. “T2-weighted four dimensional magnetic resonance imaging with result-driven phase sorting.” Med Phys 42, no. 8 (August 2015): 4460–71. https://doi.org/10.1118/1.4923168.
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    • Zhang, You, Fang-Fang Yin, and Lei Ren. “Dosimetric verification of lung cancer treatment using the CBCTs estimated from limited-angle on-board projections.” Med Phys 42, no. 8 (August 2015): 4783–95. https://doi.org/10.1118/1.4926559.
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    • Stanhope, Carl, Q Jackie Wu, Lulin Yuan, Jianfei Liu, Rodney Hood, Fang-Fang Yin, and Justus Adamson. “Utilizing knowledge from prior plans in the evaluation of quality assurance.” Phys Med Biol 60, no. 12 (June 21, 2015): 4873–91. https://doi.org/10.1088/0031-9155/60/12/4873.
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    • Adamson, J., Z. Chang, J. Cai, M. Palta, J. Horton, F. Yin, and R. Blitzblau. “SU-E-J-223: A BOLD Contrast Imaging Sequence to Evaluate Oxygenation Changes Due to Breath Holding for Breast Radiotherapy: A Pilot Study.” Med Phys 42, no. 6 (June 2015): 3317. https://doi.org/10.1118/1.4924309.
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    • Cui, T., L. Hu, W. Miller, F. Yin, and J. Cai. “TH-CD-204-09: Physiological Modeling of Lung Motion Based On Hyperpolarized Gas Tagging MRI.” Med Phys 42, no. 6 (June 2015): 3733. https://doi.org/10.1118/1.4926256.
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    • Hu, L., T. Cui, W. Miller, F. Yin, and J. Cai. “WE-AB-BRA-11: Development of Physiological-Based Virtual Thorax Phantoms for Evaluation of Deformable Image Registration.” Med Phys 42, no. 6 (June 2015): 3655. https://doi.org/10.1118/1.4925864.
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    • Liang, B., B. Liu, F. Yin, F. Zhou, and Q. Wu. “SU-E-T-690: Sensitivity Analysis to Machine Error: Comparisons of VMAT QA Systems.” Med Phys 42, no. 6 (June 2015): 3495. https://doi.org/10.1118/1.4925053.
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    • Liang, X., L. Hu, F. Yin, and J. Cai. “WE-AB-BRA-03: Displacement Vector Field (DVF) Error Correction Using Sparsely Distributed Ground-Truth Displacement Vectors.” Med Phys 42, no. 6 (June 2015): 3653. https://doi.org/10.1118/1.4925856.
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    • Liang, X., Y. Liu, F. Yin, and J. Cai. “TH-CD-204-10: Probability-Driven Sorting Method for Reconstructing Variation-Independent 4D-MRI.” Med Phys 42, no. 6 (June 2015): 3734. https://doi.org/10.1118/1.4926257.
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    • Zhang, You, Fang-Fang Yin, Tinsu Pan, Irina Vergalasova, and Lei Ren. “Preliminary clinical evaluation of a 4D-CBCT estimation technique using prior information and limited-angle projections.” Radiother Oncol 115, no. 1 (April 2015): 22–29. https://doi.org/10.1016/j.radonc.2015.02.022.
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    • Yang, Yun, Taoran Li, Lunlin Yuan, Yaorong Ge, Fang-Fang Yin, W Robert Lee, and Q Jackie Wu. “Quantitative comparison of automatic and manual IMRT optimization for prostate cancer: the benefits of DVH prediction.” J Appl Clin Med Phys 16, no. 2 (March 8, 2015): 5204. https://doi.org/10.1120/jacmp.v16i2.5204.
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    • Liu, Jianfei, Q Jackie Wu, John P. Kirkpatrick, Fang-Fang Yin, Lulin Yuan, and Yaorong Ge. “From active shape model to active optical flow model: a shape-based approach to predicting voxel-level dose distributions in spine SBRT.” Phys Med Biol 60, no. 5 (March 7, 2015): N83–92. https://doi.org/10.1088/0031-9155/60/5/N83.
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    • Yuan, Lulin, Q Jackie Wu, Fangfang Yin, Ying Li, Yang Sheng, Christopher R. Kelsey, and Yaorong Ge. “Standardized beam bouquets for lung IMRT planning.” Phys Med Biol 60, no. 5 (March 7, 2015): 1831–43. https://doi.org/10.1088/0031-9155/60/5/1831.
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    • Liu, Yilin, Fang-Fang Yin, Nan-kuei Chen, Mei-Lan Chu, and Jing Cai. “Four dimensional magnetic resonance imaging with retrospective k-space reordering: a feasibility study.” Med Phys 42, no. 2 (February 2015): 534–41. https://doi.org/10.1118/1.4905044.
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    • Li, Ying, Anna Rodrigues, Taoran Li, Lulin Yuan, Fang-Fang Yin, and Q Jackie Wu. “Impact of dose calculation accuracy during optimization on lung IMRT plan quality.” J Appl Clin Med Phys 16, no. 1 (January 8, 2015): 5137. https://doi.org/10.1120/jacmp.v16i1.5137.
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    • Yoo, Sua, Rachel Blitzblau, Fang-Fang Yin, and Janet K. Horton. “Dosimetric comparison of preoperative single-fraction partial breast radiotherapy techniques: 3D CRT, noncoplanar IMRT, coplanar IMRT, and VMAT.” J Appl Clin Med Phys 16, no. 1 (January 8, 2015): 5126. https://doi.org/10.1120/jacmp.v16i1.5126.
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    • Li, Taoran, Qiuwen Wu, Yun Yang, Anna Rodrigues, Fang-Fang Yin, and Q. Jackie Wu. “Quality assurance for online adapted treatment plans: benchmarking and delivery monitoring simulation.” Med Phys 42, no. 1 (January 2015): 381–90. https://doi.org/10.1118/1.4904021.
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    • Liu, J., Q. Jackie Wu, F. F. Yin, J. P. Kirkpatrick, A. Cabrera, and Y. Ge. “An active optical flow model for dose prediction in spinal sbrt plans.” Lecture Notes in Computational Vision and Biomechanics 20 (January 1, 2015): 27–35. https://doi.org/10.1007/978-3-319-14148-0_3.
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    • Yang, Y., T. Li, L. Yuan, Y. Ge, F. F. Yin, W. R. Lee, and Q. J. Wu. “Quantitative comparison of automatic and manual IMRT optimization for prostate cancer: The benefits of DVH prediction.” Journal of Applied Clinical Medical Physics 16, no. 2 (January 1, 2015): 241–50. https://doi.org/10.1120/jacmp.v16i2.5204.
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    • Yoo, S., R. Blitzblau, F. F. Yin, and J. K. Horton. “Dosimetric comparison of preoperative single-fraction partial breast radiotherapy techniques: 3D CRT, noncoplanar IMRT, coplanar IMRT, and VMAT.” Journal of Applied Clinical Medical Physics 16, no. 1 (January 1, 2015): 183–91.
    • Kirkpatrick, John P., Zhiheng Wang, John H. Sampson, Frances McSherry, James E. Herndon, Karen J. Allen, Eileen Duffy, et al. “Defining the optimal planning target volume in image-guided stereotactic radiosurgery of brain metastases: results of a randomized trial.” Int J Radiat Oncol Biol Phys 91, no. 1 (January 1, 2015): 100–108. https://doi.org/10.1016/j.ijrobp.2014.09.004.
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    • Yang, Juan, Jing Cai, Hongjun Wang, Zheng Chang, Brian G. Czito, Mustafa R. Bashir, Manisha Palta, and Fang-Fang Yin. “Is diaphragm motion a good surrogate for liver tumor motion?” Int J Radiat Oncol Biol Phys 90, no. 4 (November 15, 2014): 952–58. https://doi.org/10.1016/j.ijrobp.2014.07.028.
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    • Yan, Susu, James Bowsher, MengHeng Tough, Lin Cheng, and Fang-Fang Yin. “A hardware investigation of robotic SPECT for functional and molecular imaging onboard radiation therapy systems.” Med Phys 41, no. 11 (November 2014): 112504. https://doi.org/10.1118/1.4898121.
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    • Kirkpatrick, J., Z. Wang, J. Sampson, F. McSherry, J. Herndon, K. Allen, E. Duffy, et al. “BM-17 * FINAL RESULTS OF A RANDOMIZED TRIAL TO IDENTIFY THE OPTIMAL PLANNING TARGET VOLUME IN IMAGE-GUIDED STEREOTACTIC RADIOSURGERY OF BRAIN METASTASES.” Neuro Oncology 16, no. suppl 5 (November 1, 2014): v35–v35. https://doi.org/10.1093/neuonc/nou240.17.
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    • Liu, Yilin, Fang-Fang Yin, Zheng Chang, Brian G. Czito, Manisha Palta, Mustafa R. Bashir, Yujiao Qin, and Jing Cai. “Investigation of sagittal image acquisition for 4D-MRI with body area as respiratory surrogate.” Med Phys 41, no. 10 (October 2014): 101902. https://doi.org/10.1118/1.4894726.
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    • Adamson, Justus, Yun Yang, Titania Juang, Kelsey Chisholm, Leith Rankine, John Adamovics, Fang Fang Yin, and Mark Oldham. “On the feasibility of polyurethane based 3D dosimeters with optical CT for dosimetric verification of low energy photon brachytherapy seeds.” Med Phys 41, no. 7 (July 2014): 071705. https://doi.org/10.1118/1.4883779.
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    • Wang, Chun-Hao, Fang-Fang Yin, Janet Horton, and Zheng Chang. “Review of treatment assessment using DCE-MRI in breast cancer radiation therapy.” World J Methodol 4, no. 2 (June 26, 2014): 46–58. https://doi.org/10.5662/wjm.v4.i2.46.
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    • Kirkpatrick, John P., Christopher R. Kelsey, Manisha Palta, Alvin R. Cabrera, Joseph K. Salama, Pretesh Patel, Bradford A. Perez, Jason Lee, and Fang-Fang Yin. “Stereotactic body radiotherapy: a critical review for nonradiation oncologists.” Cancer 120, no. 7 (April 1, 2014): 942–54. https://doi.org/10.1002/cncr.28515.
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    • Yang, Juan, Jing Cai, Hongjun Wang, Zheng Chang, Brian G. Czito, Mustafa R. Bashir, and Fang-Fang Yin. “Four-dimensional magnetic resonance imaging using axial body area as respiratory surrogate: initial patient results.” Int J Radiat Oncol Biol Phys 88, no. 4 (March 15, 2014): 907–12. https://doi.org/10.1016/j.ijrobp.2013.11.245.
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    • Chang, Zheng, John P. Kirkpatrick, Zhiheng Wang, Jing Cai, Justus Adamson, and Fang-Fang Yin. “Evaluating radiation-induced white matter changes in patients treated with stereotactic radiosurgery using diffusion tensor imaging: a pilot study.” Technol Cancer Res Treat 13, no. 1 (February 2014): 21–28. https://doi.org/10.7785/tcrt.2012.500358.
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    • Ren, Lei, You Zhang, and Fang-Fang Yin. “A limited-angle intrafraction verification (LIVE) system for radiation therapy.” Med Phys 41, no. 2 (February 2014): 020701. https://doi.org/10.1118/1.4861820.
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    • Yuan, Lulin, Q Jackie Wu, Fang-Fang Yin, Yuliang Jiang, David Yoo, and Yaorong Ge. “Incorporating single-side sparing in models for predicting parotid dose sparing in head and neck IMRT.” Med Phys 41, no. 2 (February 2014): 021728. https://doi.org/10.1118/1.4862075.
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    • Rodrigues, Anna, Fang-Fang Yin, and Qiuwen Wu. “Dynamic electron arc radiotherapy (DEAR): a feasibility study.” Phys Med Biol 59, no. 2 (January 20, 2014): 327–45. https://doi.org/10.1088/0031-9155/59/2/327.
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    • Bowsher, James, Susu Yan, Justin Roper, William Giles, and Fang-Fang Yin. “Onboard functional and molecular imaging: a design investigation for robotic multipinhole SPECT.” Med Phys 41, no. 1 (January 2014): 010701. https://doi.org/10.1118/1.4845195.
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    • Patel, Pretesh R., John Kirkpatrick, Joseph K. Salama, John Nelson, Gloria Broadwater, Karen Allen, Robert Clough, et al. “Stereotactic ablative body radiotherapy (SABR) for effective palliation of metastases: factors affecting local control.” J Radiosurg Sbrt 3, no. 2 (2014): 123–29.
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    • Yang, Yun, Suzanne Catalano, Chris R. Kelsey, David S. Yoo, Fang-Fang Yin, and Jing Cai. “Dosimetric effects of rotational offsets in stereotactic body radiation therapy (SBRT) for lung cancer.” Med Dosim 39, no. 1 (2014): 117–21. https://doi.org/10.1016/j.meddos.2013.11.002.
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    • Qiu, Jian-Jian, Zheng Chang, Janet K. Horton, Qing-Rong Jackie Wu, Sua Yoo, and Fang-Fang Yin. “Dosimetric comparison of 3D conformal, IMRT, and V-MAT techniques for accelerated partial-breast irradiation (APBI).” Med Dosim 39, no. 2 (2014): 152–58. https://doi.org/10.1016/j.meddos.2013.12.001.
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    • Ryu, Samuel, Stephanie L. Pugh, Peter C. Gerszten, Fang-Fang Yin, Robert D. Timmerman, Ying J. Hitchcock, Benjamin Movsas, et al. “RTOG 0631 phase 2/3 study of image guided stereotactic radiosurgery for localized (1-3) spine metastases: phase 2 results.” Pract Radiat Oncol 4, no. 2 (2014): 76–81. https://doi.org/10.1016/j.prro.2013.05.001.
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    • Zhang, Fan, Chris R. Kelsey, David Yoo, Fang-Fang Yin, and Jing Cai. “Uncertainties of 4-dimensional computed tomography-based tumor motion measurement for lung stereotactic body radiation therapy.” Pract Radiat Oncol 4, no. 1 (2014): e59–65. https://doi.org/10.1016/j.prro.2013.02.009.
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    • Li, Hao, Bo Liu, and Fang-Fang Yin. “Generation of virtual monochromatic CBCT from dual kV∕MV beam projections.” Med Phys 40, no. 12 (December 2013): 121910. https://doi.org/10.1118/1.4824324.
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    • Yan, Susu, James Bowsher, and Fang-Fang Yin. “A line-source method for aligning on-board and other pinhole SPECT systems.” Med Phys 40, no. 12 (December 2013): 122501. https://doi.org/10.1118/1.4828776.
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    • Zhang, You, Fang-Fang Yin, W Paul Segars, and Lei Ren. “A technique for estimating 4D-CBCT using prior knowledge and limited-angle projections.” Med Phys 40, no. 12 (December 2013): 121701. https://doi.org/10.1118/1.4825097.
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    • Lian, Jun, Lulin Yuan, Yaorong Ge, Bhishamjit S. Chera, David P. Yoo, Sha Chang, FangFang Yin, and Q Jackie Wu. “Modeling the dosimetry of organ-at-risk in head and neck IMRT planning: an intertechnique and interinstitutional study.” Med Phys 40, no. 12 (December 2013): 121704. https://doi.org/10.1118/1.4828788.
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    • Li, Taoran, Qiuwen Wu, You Zhang, Irina Vergalasova, W Robert Lee, Fang-Fang Yin, and Q Jackie Wu. “Strategies for automatic online treatment plan reoptimization using clinical treatment planning system: a planning parameters study.” Med Phys 40, no. 11 (November 2013): 111711. https://doi.org/10.1118/1.4823473.
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    • Vergalasova, I., J. Cai, W. Giles, W. P. Segars, and F. F. Yin. “Evaluation of the effect of respiratory and anatomical variables on a Fourier technique for markerless, self-sorted 4D-CBCT.” Phys Med Biol 58, no. 20 (October 21, 2013): 7239–59. https://doi.org/10.1088/0031-9155/58/20/7239.
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    • Liu, Bo, Justus Adamson, Anna Rodrigues, Fugen Zhou, Fang-fang Yin, and Qiuwen Wu. “A novel technique for VMAT QA with EPID in cine mode on a Varian TrueBeam linac.” Phys Med Biol 58, no. 19 (October 7, 2013): 6683–6700. https://doi.org/10.1088/0031-9155/58/19/6683.
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    • Wu, Q Jackie, Taoran Li, Lulin Yuan, Fang-Fang Yin, and W Robert Lee. “Single institution's dosimetry and IGRT analysis of prostate SBRT.” Radiat Oncol 8 (September 13, 2013): 215. https://doi.org/10.1186/1748-717X-8-215.
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    • Ge, Hong, Jing Cai, Christopher Kelsey, and Fang-Fang Yin. “In reply to Kumar et al.” Int J Radiat Oncol Biol Phys 87, no. 1 (September 1, 2013): 5–6. https://doi.org/10.1016/j.ijrobp.2013.04.044.
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    • Good, David, Joseph Lo, W Robert Lee, Q Jackie Wu, Fang-Fang Yin, and Shiva K. Das. “A knowledge-based approach to improving and homogenizing intensity modulated radiation therapy planning quality among treatment centers: an example application to prostate cancer planning.” Int J Radiat Oncol Biol Phys 87, no. 1 (September 1, 2013): 176–81. https://doi.org/10.1016/j.ijrobp.2013.03.015.
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    • Qin, Yujiao, Fan Zhang, David S. Yoo, Chris R. Kelsey, Fang-Fang Yin, and Jing Cai. “Adaptive stereotactic body radiation therapy planning for lung cancer.” Int J Radiat Oncol Biol Phys 87, no. 1 (September 1, 2013): 209–15. https://doi.org/10.1016/j.ijrobp.2013.05.008.
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    • Kirkpatrick, John P., Fang-Fang Yin, and John H. Sampson. “Radiotherapy and radiosurgery for tumors of the central nervous system.” Surg Oncol Clin N Am 22, no. 3 (July 2013): 445–61. https://doi.org/10.1016/j.soc.2013.02.008.
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    • Zhang, You, Lei Ren, C Clifton Ling, and Fang-Fang Yin. “Respiration-phase-matched digital tomosynthesis imaging for moving target verification: a feasibility study.” Med Phys 40, no. 7 (July 2013): 071723. https://doi.org/10.1118/1.4810921.
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    • Liu, Y., Z. Chang, B. Czito, M. Bashir, F. Yin, and J. Cai. “TH-C-141-07: T2-Weighted 4D-MRI with Combined Phase and Amplitude Sorting.” Med Phys 40, no. 6Part32 (June 2013): 540. https://doi.org/10.1118/1.4815775.
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    • Yang, J., F. Yin, H. Wang, Z. Chang, B. Czito, M. Bashir, and J. Cai. “TU-G-134-01: 4D-MRI Using Body Area as Internal Respiratory Surrogate: Initial Patient Results.” Med Phys 40, no. 6Part28 (June 2013): 460. https://doi.org/10.1118/1.4815479.
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    • Yang, J., J. Cai, H. Wang, Z. Chang, B. Czito, M. Bashir, and F. Yin. “WE-C-116-07: Tumor Enhancement Using Deformable Image Registration for Four-Dimensional Magnetic Resonance Imaging (4D-MRI): A Feasibility Study.” Med Phys 40, no. 6Part29 (June 2013): 485. https://doi.org/10.1118/1.4815569.
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    • Chang, Z., Q. Wu, H. Yan, Y. Yang, W. Giles, C. Busselberg, R. Lipscomb, and F. Yin. “SU-E-T-143: Dosimetric Characteristics of TrueBeam STx System with High Definition Multi-Leaf Collimator: Commissioning of Stereotactic Radiosurgery.” Med Phys 40, no. 6Part12 (June 2013): 236–37. https://doi.org/10.1118/1.4814578.
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    • Li, H., I. Vergalasova, W. Giles, J. Bowsher, and F. Yin. “WE-G-134-04: Four-Dimensional Dual Cone-Beam CT (4D-DCBCT): Preliminary Experimental Results.” Med Phys 40, no. 6Part31 (June 2013): 512. https://doi.org/10.1118/1.4815673.
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    • Sheng, Y., T. Li, L. Yuan, F. Yin, and Q. Wu. “TH-C-137-11: Dose-Guided Automatic IMRT Planning: A Feasibility Study.” Med Phys 40, no. 6Part32 (June 2013): 535. https://doi.org/10.1118/1.4815754.
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    • Yan, S., J. Bowsher, S. Yoo, and F. Yin. “SU-D-500-06: On-Board Robotic Multi-Pinhole SPECT System for Prone Breast Imaging.” Med Phys 40, no. 6Part3 (June 2013): 106. https://doi.org/10.1118/1.4814023.
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    • Yin, F., S. Benedict, J. Bradley, J. Cai, and K. Wijesooriya. “WE-A-500-01: Quality Control of Lung SBRT: Minimizing Uncertainties From Simulation to Treatment.” Med Phys 40, no. 6Part28 (June 2013): 464. https://doi.org/10.1118/1.4815490.
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    • Kim, Sangroh, Terry T. Yoshizumi, Fang-Fang Yin, and Indrin J. Chetty. “Spiral computed tomography phase-space source model in the BEAMnrc/EGSnrc Monte Carlo system: implementation and validation.” Phys Med Biol 58, no. 8 (April 21, 2013): 2609–24. https://doi.org/10.1088/0031-9155/58/8/2609.
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    • Xiao, Y., F. Yin, F. M. S. Kong, J. Yue, and J. Galvin. “Quality requirements for stereotactic body radiation therapy (SBRT) in multi-institutional clinical trials.” Ifmbe Proceedings 39 IFMBE (April 16, 2013): 2284–87. https://doi.org/10.1007/978-3-642-29305-4_599.
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    • Li, Hao, William Giles, James Bowsher, and Fang-Fang Yin. “A dual cone-beam CT system for image guided radiotherapy: initial performance characterization.” Med Phys 40, no. 2 (February 2013): 021912. https://doi.org/10.1118/1.4788654.
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    • Cai, Jing, Zheng Chang, Jennifer O’Daniel, Sua Yoo, Hong Ge, Christopher Kelsey, and Fang-Fang Yin. “Investigation of sliced body volume (SBV) as respiratory surrogate.” J Appl Clin Med Phys 14, no. 1 (January 7, 2013): 3987. https://doi.org/10.1120/jacmp.v14i1.3987.
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    • Cai, J., Z. Chang, O. Jennifer, S. Yoo, G. Hong, C. Kelsey, and F. F. Yin. “Investigation of sliced body volume (SBV) as respiratory surrogate.” Journal of Applied Clinical Medical Physics 14, no. 1 (January 1, 2013): 71–80. https://doi.org/10.1120/jacmp.v14i1.3987.
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    • Cui, Yunfeng, James M. Galvin, William Parker, Stephen Breen, Fang-Fang Yin, Jing Cai, Lech S. Papiez, et al. “Implementation of remote 3-dimensional image guided radiation therapy quality assurance for radiation therapy oncology group clinical trials.” Int J Radiat Oncol Biol Phys 85, no. 1 (January 1, 2013): 271–77. https://doi.org/10.1016/j.ijrobp.2012.03.002.
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    • Kirkpatrick, John P., Kim L. Light, Robyn M. Walker, Debra L. Georgas, Phillip A. Antoine, Robert W. Clough, Heidi B. Cozart, Fang-Fang Yin, Sua Yoo, and Christopher G. Willett. “Implementing and integrating a clinically driven electronic medical record for radiation oncology in a large medical enterprise.” Front Oncol 3 (2013): 69. https://doi.org/10.3389/fonc.2013.00069.
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    • Cai, J., Z. Chang, B. Czito, and F. Yin. “Improving Tumor-to-Tissue CNR of 4D-MRI Using Deformable Image Registration.” Pract Radiat Oncol 3, no. 2 Suppl 1 (2013): S8–9. https://doi.org/10.1016/j.prro.2013.01.027.
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    • Giles, William, James Bowsher, Hao Li, and Fang-Fang Yin. “Interleaved acquisition for cross scatter avoidance in dual cone-beam CT.” Med Phys 39, no. 12 (December 2012): 7719–28. https://doi.org/10.1118/1.4768160.
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    • Chang, Zheng, Qiuwen Wu, Justus Adamson, Lei Ren, James Bowsher, Hui Yan, Andrew Thomas, and Fang-Fang Yin. “Commissioning and dosimetric characteristics of TrueBeam system: composite data of three TrueBeam machines.” Med Phys 39, no. 11 (November 2012): 6981–7018. https://doi.org/10.1118/1.4762682.
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    • Salama, Joseph K., John P. Kirkpatrick, and Fang-Fang Yin. “Stereotactic body radiotherapy treatment of extracranial metastases.” Nat Rev Clin Oncol 9, no. 11 (November 2012): 654–65. https://doi.org/10.1038/nrclinonc.2012.166.
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    • Yuan, Lulin, Yaorong Ge, W Robert Lee, Fang Fang Yin, John P. Kirkpatrick, and Q Jackie Wu. “Quantitative analysis of the factors which affect the interpatient organ-at-risk dose sparing variation in IMRT plans.” Med Phys 39, no. 11 (November 2012): 6868–78. https://doi.org/10.1118/1.4757927.
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    • Zhang, Fan, Jing Hu, Chris R. Kelsey, David Yoo, Fang-Fang Yin, and Jing Cai. “Reproducibility of tumor motion probability distribution function in stereotactic body radiation therapy of lung cancer.” Int J Radiat Oncol Biol Phys 84, no. 3 (November 1, 2012): 861–66. https://doi.org/10.1016/j.ijrobp.2012.01.037.
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    • Li, Hao, William Giles, Lei Ren, James Bowsher, and Fang-Fang Yin. “Implementation of dual-energy technique for virtual monochromatic and linearly mixed CBCTs.” Med Phys 39, no. 10 (October 2012): 6056–64. https://doi.org/10.1118/1.4752212.
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    • Ren, Lei, Fang-Fang Yin, Indrin J. Chetty, David A. Jaffray, and Jian-Yue Jin. “Feasibility study of a synchronized-moving-grid (SMOG) system to improve image quality in cone-beam computed tomography (CBCT).” Med Phys 39, no. 8 (August 2012): 5099–5110. https://doi.org/10.1118/1.4736826.
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    • Chang, Zheng, James Bowsher, Jing Cai, Sua Yoo, Zhiheng Wang, Justus Adamson, Lei Ren, and Fang-Fang Yin. “Imaging system QA of a medical accelerator, Novalis Tx, for IGRT per TG 142: our 1 year experience.” J Appl Clin Med Phys 13, no. 4 (July 5, 2012): 3754. https://doi.org/10.1120/jacmp.v13i4.3754.
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    • Chang, Z., Q. Wu, J. Adamson, L. Ren, J. Bowsher, H. Yan, A. Thomas, and F. Yin. “SU-E-T-104: Commissioning and Dosimetric Characteristics of TrueBeam System: Composite Data of Three TrueBeam Machines.” Med Phys 39, no. 6Part11 (June 2012): 3726. https://doi.org/10.1118/1.4735162.
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    • Li, T., L. Yuan, Q. Wu, F. Yin, and Q. J. Wu. “MO-D-BRB-09: Treatment Delivery QA for Online Adaptive Radiation Therapy Based on Dynamic Machine Information (DMI): A Feasibility Study.” Med Phys 39, no. 6Part21 (June 2012): 3867–68. https://doi.org/10.1118/1.4735790.
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    • Panta, R., W. Segars, F. Yin, and J. Cai. “SU-E-J-145: Implementing 4D XCAT Phantom for 4D Radiotherapy Research.” Med Phys 39, no. 6Part8 (June 2012): 3686. https://doi.org/10.1118/1.4734981.
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    • Qin, Y., F. Zhang, C. Kelsey, D. Yoo, F. Yin, and J. Cai. “TU-E-BRB-04: Adaptive Stereotactic-Body Radiation Therapy (SBRT) Planning for Lung Cancer.” Med Phys 39, no. 6Part24 (June 2012): 3908. https://doi.org/10.1118/1.4735953.
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    • Qin, Y., Z. Chang, W. Segars, F. Yin, and J. Cai. “SU-D-218-02: 4D-MRI Based on Body Area (BA) Surrogate and Sagittal Image Acquisition.” Med Phys 39, no. 6Part3 (June 2012): 3622. https://doi.org/10.1118/1.4734705.
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    • Tseng, T., Z. Chang, F. Yin, and Z. Wang. “SU-E-J-32: Evaluation of the Dosimetric Accuracy of Stereotactic Radiosurgery with Cone-Beam Computed Tomography Localization.” Med Phys 39, no. 6Part6 (June 2012): 3659. https://doi.org/10.1118/1.4734865.
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    • Turner, K., J. Cai, F. Yin, Y. Zhang, and I. Vergalasova. “SU-E-J-209: A Simple Method to Minimize Uncertainty in ITV Delineation: Phantom Verification.” Med Phys 39, no. 6Part9 (June 2012): 3700–3701. https://doi.org/10.1118/1.4735049.
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    • Wu, Q., S. Yoo, S. Das, and F. Yin. “SU-E-T-559: Evaluation of Flatening Filter Free (FFF) Beams in Radiotherapy of Head and Neck Cancer.” Med Phys 39, no. 6Part19 (June 2012): 3834. https://doi.org/10.1118/1.4735648.
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    • Zhang, F., Y. Qin, W. Segars, F. Yin, and J. Cai. “MO-A-213AB-04: Verification of 4D Dose Delivery Using 4D Digital Human Phantom.” Med Phys 39, no. 6Part20 (June 2012): 3859. https://doi.org/10.1118/1.4735756.
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    • Roper, Justin R., James E. Bowsher, Joshua M. Wilson, Timothy G. Turkington, and Fang-Fang Yin. “Target localization using scanner-acquired SPECT data.” J Appl Clin Med Phys 13, no. 3 (May 10, 2012): 3724. https://doi.org/10.1120/jacmp.v13i3.3724.
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    • Yoo, Sua, Qiuwen Wu, Jennifer O’Daniel, Janet Horton, and Fang-Fang Yin. “Comparison of 3D conformal breast radiation treatment plans using the anisotropic analytical algorithm and pencil beam convolution algorithm.” Radiother Oncol 103, no. 2 (May 2012): 172–77. https://doi.org/10.1016/j.radonc.2012.01.010.
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    • Tian, Yuan, Zhiheng Wang, Hong Ge, Tian Zhang, Jing Cai, Christopher Kelsey, David Yoo, and Fang-Fang Yin. “Dosimetric comparison of treatment plans based on free breathing, maximum, and average intensity projection CTs for lung cancer SBRT.” Med Phys 39, no. 5 (May 2012): 2754–60. https://doi.org/10.1118/1.4705353.
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    • O’Daniel, Jennifer, Shiva Das, Q Jackie Wu, and Fang-Fang Yin. “Volumetric-modulated arc therapy: effective and efficient end-to-end patient-specific quality assurance.” Int J Radiat Oncol Biol Phys 82, no. 5 (April 1, 2012): 1567–74. https://doi.org/10.1016/j.ijrobp.2011.01.018.
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    • Ren, Lei, Indrin J. Chetty, Junan Zhang, Jian-Yue Jin, Q Jackie Wu, Hui Yan, David M. Brizel, W Robert Lee, Benjamin Movsas, and Fang-Fang Yin. “Development and clinical evaluation of a three-dimensional cone-beam computed tomography estimation method using a deformation field map.” Int J Radiat Oncol Biol Phys 82, no. 5 (April 1, 2012): 1584–93. https://doi.org/10.1016/j.ijrobp.2011.02.002.
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    • Chang, Zheng, Qing-San Xiang, Hao Shen, Jim Ji, and Fang-Fang Yin. “Accelerating phase contrast MR angiography by simplified skipped phase encoding and edge deghosting with array coil enhancement.” Med Phys 39, no. 3 (March 2012): 1247–52. https://doi.org/10.1118/1.3682000.
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    • Vergalasova, Irina, Jing Cai, and Fang-Fang Yin. “A novel technique for markerless, self-sorted 4D-CBCT: feasibility study.” Med Phys 39, no. 3 (March 2012): 1442–51. https://doi.org/10.1118/1.3685443.
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    • Koontz, Bridget, Masaki Kimura, Hui Yan, Andrew Zodda, Gloria Broadwater, Craig Donatucci, Fang-fang Yin, and Zeljko Vujaskovic. “DOSE DEPENDENCE OF RADIATION-INDUCED ERECTILE DYSFUNCTION IN AN ANIMAL MODEL.” Journal of Sexual Medicine 9 (February 1, 2012): 4–4.
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    • Yue, Jinbo, Xindong Sun, Jing Cai, Fang-Fang Yin, Yong Yin, Jian Zhu, Jie Lu, et al. “Lipiodol: a potential direct surrogate for cone-beam computed tomography image guidance in radiotherapy of liver tumor.” Int J Radiat Oncol Biol Phys 82, no. 2 (February 1, 2012): 834–41. https://doi.org/10.1016/j.ijrobp.2010.12.050.
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    • Chang, Z., J. Bowsher, J. Cai, S. Yoo, Z. Wang, J. Adamson, L. Ren, and F. F. Yin. “Imaging system QA of a medical accelerator, Novalis Tx, for IGRT per TG 142: Our 1 year experience.” Journal of Applied Clinical Medical Physics 13, no. 4 (January 1, 2012): 113–40. https://doi.org/10.1120/jacmp.v13i4.3754.
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    • Roper, J. R., J. E. Bowsher, J. M. Wilson, T. G. Turkington, and F. F. Yin. “Target localization using scanner-acquired SPECT data.” Journal of Applied Clinical Medical Physics 13, no. 3 (January 1, 2012): 108–23. https://doi.org/10.1120/jacmp.v13i3.3724.
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    • Wu, Q. J., D. Thongphiew, Z. Wang, C. Willett, L. Marks, and F. F. Yin. “Development of a 4D dosimetry simulation system in radiotherapy.” International Journal of Biomedical Engineering and Technology 8, no. 2–3 (January 1, 2012): 230–44. https://doi.org/10.1504/IJBET.2012.046088.
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    • Panta, Raj K., Paul Segars, Fang-Fang Yin, and Jing Cai. “Establishing a framework to implement 4D XCAT phantom for 4D radiotherapy research.” J Cancer Res Ther 8, no. 4 (2012): 565–70. https://doi.org/10.4103/0973-1482.106539.
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    • Cai, Jing, Zheng Chang, Zhiheng Wang, William Paul Segars, and Fang-Fang Yin. “Four-dimensional magnetic resonance imaging (4D-MRI) using image-based respiratory surrogate: a feasibility study.” Med Phys 38, no. 12 (December 2011): 6384–94. https://doi.org/10.1118/1.3658737.
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    • Adamson, Justus, Tingliang Zhuang, and Fang-Fang Yin. “Contour based respiratory motion analysis for free breathing CT.” Comput Biol Med 41, no. 10 (October 2011): 908–15. https://doi.org/10.1016/j.compbiomed.2011.08.002.
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    • Ryu, S., J. James, P. Gerszten, F. Yin, R. Timmerman, Y. Hitchcock, B. Movsas, A. Kanner, L. Berk, and L. Kachnic. “RTOG 0631 Phase II/III Study of Image-guided Stereotactic Radiosurgery for Localized Spine Metastases: Phase II Results.” International Journal of Radiation Oncology*Biology*Physics 81, no. 2 (October 2011): S131–32. https://doi.org/10.1016/j.ijrobp.2011.06.271.
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    • Ryu, Samuel, Stephanie L. Pugh, Peter C. Gerszten, Fang-Fang Yin, Robert D. Timmerman, Ying J. Hitchcock, Benjamin Movsas, et al. “RTOG 0631 Phase II/III Study of Image-Guided Stereotactic Radiosurgery for Localized (1-3) Spine Metastases: Phase II Results.” Int J Radiat Oncol Biol Phys 81, no. 2 (October 1, 2011): S131–32. https://doi.org/10.1016/j.prro.2013.05.001.
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    • Vergalasova, I., J. Cai, and F. Yin. “Fourier Transform (FT) Techniques for Markerless 4D Cone-beam CT (4D-CBCT) Sorting: Comparison between Phase vs. Magnitude.” International Journal of Radiation Oncology*Biology*Physics 81, no. 2 (October 2011): S59–S59. https://doi.org/10.1016/j.ijrobp.2011.06.119.
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    • Yoo, S., J. O’Daniel, J. Horton, R. Blitzblau, and F. Yin. “A Dual-Isocenter Technique for Image Guidance of Prone-Breast Radiation Therapy.” International Journal of Radiation Oncology*Biology*Physics 81, no. 2 (October 2011): S824–25. https://doi.org/10.1016/j.ijrobp.2011.06.1454.
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    • Zhang, F., C. Kelsey, F. Yin, and J. Cai. “Correlation between External Surrogate Motion and Lung Tumor Motion: From a Statistical Point of View.” International Journal of Radiation Oncology*Biology*Physics 81, no. 2 (October 2011): S781–82. https://doi.org/10.1016/j.ijrobp.2011.06.1211.
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    • Kimura, Masaki, Hui Yan, Zahid Rabbani, Takefumi Satoh, Shiro Baba, Fang-fang Yin, Thomas J. Polascik, Craig F. Donatucci, Zeljko Vujaskovic, and Bridget F. Koontz. “Radiation-induced erectile dysfunction using prostate-confined modern radiotherapy in a rat model.” J Sex Med 8, no. 8 (August 2011): 2215–26. https://doi.org/10.1111/j.1743-6109.2011.02351.x.
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    • Vergalasova, Irina, Jacqueline Maurer, and Fang-Fang Yin. “Potential underestimation of the internal target volume (ITV) from free-breathing CBCT.” Med Phys 38, no. 8 (August 2011): 4689–99. https://doi.org/10.1118/1.3613153.
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    • Chang, Zheng, Tonghai Liu, Jing Cai, Qing Chen, Zhiheng Wang, and Fang-Fang Yin. “Evaluation of integrated respiratory gating systems on a Novalis Tx system.” J Appl Clin Med Phys 12, no. 3 (April 4, 2011): 3495. https://doi.org/10.1120/jacmp.v12i3.3495.
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    • Giles, William, James Bowsher, Hao Li, and Fang-Fang Yin. “Crescent artifacts in cone-beam CT.” Med Phys 38, no. 4 (April 2011): 2116–21. https://doi.org/10.1118/1.3567508.
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    • Li, Taoran, Danthai Thongphiew, Xiaofeng Zhu, W Robert Lee, Zeljko Vujaskovic, Fang-Fang Yin, and Q Jackie Wu. “Adaptive prostate IGRT combining online re-optimization and re-positioning: a feasibility study.” Phys Med Biol 56, no. 5 (March 7, 2011): 1243–58. https://doi.org/10.1088/0031-9155/56/5/002.
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    • Koontz, Bridget F., Hui Yan, Masaki Kimura, Zeljko Vujaskovic, Craig Donatucci, and Fang-Fang Yin. “Feasibility study of an intensity-modulated radiation model for the study of erectile dysfunction.” J Sex Med 8, no. 2 (February 2011): 411–18. https://doi.org/10.1111/j.1743-6109.2010.02125.x.
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    • Zhu, Xiaofeng, Yaorong Ge, Taoran Li, Danthai Thongphiew, Fang-Fang Yin, and Q Jackie Wu. “A planning quality evaluation tool for prostate adaptive IMRT based on machine learning.” Med Phys 38, no. 2 (February 2011): 719–26. https://doi.org/10.1118/1.3539749.
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    • Kim, Sangroh, Haijun Song, Ehsan Samei, Fang-Fang Yin, and Terry T. Yoshizumi. “Computed tomography dose index and dose length product for cone-beam CT: Monte Carlo simulations.” J Appl Clin Med Phys 12, no. 2 (January 19, 2011): 3395. https://doi.org/10.1120/jacmp.v12i2.3395.
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    • Chang, Z., T. H. Liu, J. Cai, Q. Chen, Z. Wang, and F. F. Yin. “Evaluation of integrated respiratory gating systems on a Novalis Tx system.” Journal of Applied Clinical Medical Physics 12, no. 3 (January 1, 2011): 71–79. https://doi.org/10.1120/jacmp.v12i3.3495.
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    • Chang, Zheng, Jing Cai, Ziheng Wang, and Fang-Fang Yin. “Evaluation of motion measurement using cine MRI for image guided stereotactic body radiotherapy on a new phantom platform.” J Radiosurg Sbrt 1, no. 2 (2011): 109–15.
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    • Kim, S., H. Song, E. Samei, F. F. Yin, and T. T. Yoshizumi. “Computed tomography dose index and dose length product for cone-beam CT: Monte Carlo simulations of a commercial system.” Journal of Applied Clinical Medical Physics 12, no. 2 (January 1, 2011): 84–95. https://doi.org/10.1120/jacmp.v12i2.3395.
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    • Wu, Q Jackie, Jeffrey Meyer, Jessica Fuller, Devon Godfrey, Zhiheng Wang, Junan Zhang, and Fang-Fang Yin. “Digital tomosynthesis for respiratory gated liver treatment: clinical feasibility for daily image guidance.” Int J Radiat Oncol Biol Phys 79, no. 1 (January 1, 2011): 289–96. https://doi.org/10.1016/j.ijrobp.2010.01.047.
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    • Zhu, X., T. Li, F. F. Yin, Q. J. Wu, and Y. Ge. “Response to comment on: A planning quality evaluation tool for prostate adaptive IMRT based on machine learning' Med. Phys. 38, 719 (2011).” Medical Physics 38, no. 5 (January 1, 2011): 2821. https://doi.org/10.1118/1.3578613.
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    • Cai, Jing, Jinbo Yue, Robert McLawhorn, Wensha Yang, Krishni Wijesooriya, Neal E. Dunlap, Ke Sheng, Fang-Fang Yin, and Stanley H. Benedict. “Dosimetric comparison of 6 MV and 15 MV single arc rapidarc to helical TomoTherapy for the treatment of pancreatic cancer.” Med Dosim 36, no. 3 (2011): 317–20. https://doi.org/10.1016/j.meddos.2010.07.002.
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    • Wu, Qingrong Jackie, Taoran Li, Qiuwen Wu, and Fang-Fang Yin. “Adaptive radiation therapy: technical components and clinical applications.” Cancer J 17, no. 3 (2011): 182–89. https://doi.org/10.1097/PPO.0b013e31821da9d8.
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    • Bowsher, J. E., J. R. Roper, S. Yan, W. M. Giles, and F. F. Yin. “Regional SPECT imaging using sampling principles and multiple pinholes.” Ieee Nuclear Science Symposium Conference Record, December 1, 2010, 2071–76. https://doi.org/10.1109/NSSMIC.2010.5874141.
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    • Ma, Lijun, Arjun Sahgal, Luca Cozzi, Eric Chang, Almon Shiu, Daniel Letourneau, Fang-Fang Yin, et al. “Apparatus-dependent dosimetric differences in spine stereotactic body radiotherapy.” Technol Cancer Res Treat 9, no. 6 (December 2010): 563–74. https://doi.org/10.1177/153303461000900604.
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    • Adamson, Justus, Zheng Chang, Zhiheng Wang, Fang-Fang Yin, and Jing Cai. “Maximum intensity projection (MIP) imaging using slice-stacking MRIa).” Med Phys 37, no. 11 (November 2010): 5914–20. https://doi.org/10.1118/1.3503850.
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    • Roper, Justin, James Bowsher, and Fang-Fang Yin. “Direction-dependent localization errors in SPECT images.” Med Phys 37, no. 9 (September 2010): 4886–96. https://doi.org/10.1118/1.3481515.
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    • Qiu, Jian-Jian, Zheng Chang, Q Jackie Wu, Sua Yoo, Janet Horton, and Fang-Fang Yin. “Impact of volumetric modulated arc therapy technique on treatment with partial breast irradiation.” Int J Radiat Oncol Biol Phys 78, no. 1 (September 1, 2010): 288–96. https://doi.org/10.1016/j.ijrobp.2009.10.036.
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    • Benedict, Stanley H., Kamil M. Yenice, David Followill, James M. Galvin, William Hinson, Brian Kavanagh, Paul Keall, et al. “Stereotactic body radiation therapy: the report of AAPM Task Group 101.” Med Phys 37, no. 8 (August 2010): 4078–4101. https://doi.org/10.1118/1.3438081.
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    • Cai, Jing, Robert McLawhorn, Paul W. Read, James M. Larner, Fang-Fang Yin, Stanley H. Benedict, and Ke Sheng. “Effects of breathing variation on gating window internal target volume in respiratory gated radiation therapya).” Med Phys 37, no. 8 (August 2010): 3927–34. https://doi.org/10.1118/1.3457329.
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    • Zhu, Xiaofeng, Danthai Thongphiew, Ryan McMahon, Taoran Li, Vira Chankong, Fang-Fang Yin, and Q Jackie Wu. “Arc-modulated radiation therapy based on linear models.” Phys Med Biol 55, no. 13 (July 7, 2010): 3873–83. https://doi.org/10.1088/0031-9155/55/13/020.
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    • Kim, Sangroh, Sua Yoo, Fang-Fang Yin, Ehsan Samei, and Terry Yoshizumi. “Kilovoltage cone-beam CT: comparative dose and image quality evaluations in partial and full-angle scan protocols.” Med Phys 37, no. 7 (July 2010): 3648–59. https://doi.org/10.1118/1.3438478.
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    • Konjar, Spela, Fangfang Yin, Matthew Bogyo, Boris Turk, and Natasa Kopitar-Jerala. “Increased nucleolar localization of SpiA3G in classically but not alternatively activated macrophages.” Febs Lett 584, no. 11 (June 3, 2010): 2201–6. https://doi.org/10.1016/j.febslet.2010.03.031.
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    • Kim, Sangroh, Terry Yoshizumi, Greta Toncheva, Sua Yoo, Fang-Fang Yin, and Donald Frush. “Estimation of computed tomography dose index in cone beam computed tomography: MOSFET measurements and Monte Carlo simulations.” Health Phys 98, no. 5 (May 2010): 683–91. https://doi.org/10.1097/HP.0b013e3181cd3ec3.
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    • Chang, Zheng, Zhiheng Wang, Jinli Ma, Jennifer C. O’Daniel, John Kirkpatrick, and Fang-Fang Yin. “6D image guidance for spinal non-invasive stereotactic body radiation therapy: Comparison between ExacTrac X-ray 6D with kilo-voltage cone-beam CT.” Radiother Oncol 95, no. 1 (April 2010): 116–21. https://doi.org/10.1016/j.radonc.2009.12.036.
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    • Kim, Sangroh, Terry T. Yoshizumi, Greta Toncheva, Donald P. Frush, and Fang-Fang Yin. “Estimation of absorbed doses from paediatric cone-beam CT scans: MOSFET measurements and Monte Carlo simulations.” Radiat Prot Dosimetry 138, no. 3 (March 2010): 257–63. https://doi.org/10.1093/rpd/ncp257.
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    • Yoo, Sua, Q Jackie Wu, W Robert Lee, and Fang-Fang Yin. “Radiotherapy treatment plans with RapidArc for prostate cancer involving seminal vesicles and lymph nodes.” Int J Radiat Oncol Biol Phys 76, no. 3 (March 1, 2010): 935–42. https://doi.org/10.1016/j.ijrobp.2009.07.1677.
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    • Chang, Zheng, Qing-San Xiang, Hao Shen, and Fang-Fang Yin. “Accelerating non-contrast-enhanced MR angiography with inflow inversion recovery imaging by skipped phase encoding and edge deghosting (SPEED).” J Magn Reson Imaging 31, no. 3 (March 2010): 757–65. https://doi.org/10.1002/jmri.22069.
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    • Maurer, Jacqueline, Tinsu Pan, and Fang-Fang Yin. “Slow gantry rotation acquisition technique for on-board four-dimensional digital tomosynthesis.” Med Phys 37, no. 2 (February 2010): 921–33. https://doi.org/10.1118/1.3285291.
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    • Stancanello, Joseph, Fang-Fang Yin, and Colin G. Orton. “Point/counterpoint. The traditional L-shaped gantry for radiotherapy linear accelerators will soon become obsolete.” Med Phys 37, no. 2 (February 2010): 409–11. https://doi.org/10.1118/1.3276730.
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    • McGuire, S. M., L. B. Marks, F. F. Yin, and S. K. Das. “A methodology for selecting the beam arrangement to reduce the intensity-modulated radiation therapy (IMRT) dose to the SPECT-defined functioning lung.” Phys Med Biol 55, no. 2 (January 21, 2010): 403–16. https://doi.org/10.1088/0031-9155/55/2/005.
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    • Wu, Q Jackie, Fang-Fang Yin, Ryan McMahon, Xiaofeng Zhu, and Shiva K. Das. “Similarities between static and rotational intensity-modulated plans.” Phys Med Biol 55, no. 1 (January 7, 2010): 33–43. https://doi.org/10.1088/0031-9155/55/1/003.
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    • Kim, Sangroh, Terry T. Yoshizumi, Donald P. Frush, Greta Toncheva, and Fang-Fang Yin. “Radiation dose from cone beam CT in a pediatric phantom: risk estimation of cancer incidence.” Ajr Am J Roentgenol 194, no. 1 (January 2010): 186–90. https://doi.org/10.2214/AJR.08.2168.
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    • Li, Taoran, Xiaofeng Zhu, Danthai Thongphiew, W Robert Lee, Zeljko Vujaskovic, Qiuwen Wu, Fang-Fang Yin, and Q Jackie Wu. “On-line adaptive radiation therapy: feasibility and clinical study.” J Oncol 2010 (2010): 407236. https://doi.org/10.1155/2010/407236.
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    • O’Daniel, J., S. Das, J. Wu, and F. F. Yin. “Patient specific quality assurance: Transition from IMRT to IMAT.” Journal of Physics: Conference Series 250 (January 1, 2010): 231–34. https://doi.org/10.1088/1742-6596/250/1/012050.
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    • Roper, J., J. Wilson, J. Bowsher, T. Turkington, and F. Yin. “SU-DD-A3-05: On-Board SPECT: Localization Study Using Scanner-Acquired Data.” Medical Physics 37 (2010): 3091–3091.
    • Yin, Fang-Fang, Mark Oldham, Jing Cai, and Qiuwen Wu. “Dosimetry challenges for implementing emerging technologies.” J Phys Conf Ser 250, no. 1 (2010): 8–11. https://doi.org/10.1088/1742-6596/250/1/012002.
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    • Ma, Jinli, Zheng Chang, Zhiheng Wang, Q. Jackie Wu, John P. Kirkpatrick, and Fang-Fang Yin. “ExacTrac X-ray 6 degree-of-freedom image-guidance for intracranial non-invasive stereotactic radiotherapy: comparison with kilo-voltage cone-beam CT.” Radiother Oncol 93, no. 3 (December 2009): 602–8. https://doi.org/10.1016/j.radonc.2009.09.009.
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    • Wu, Q Jackie, Sua Yoo, John P. Kirkpatrick, Danthai Thongphiew, and Fang-Fang Yin. “Volumetric arc intensity-modulated therapy for spine body radiotherapy: comparison with static intensity-modulated treatment.” Int J Radiat Oncol Biol Phys 75, no. 5 (December 1, 2009): 1596–1604. https://doi.org/10.1016/j.ijrobp.2009.05.005.
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    • Guan, Huaiqun, Rabih Hammoud, and Fang-Fang Yin. “A positioning QA procedure for 2D/2D (kV/MV) and 3D/3D (CT/CBCT) image matching for radiotherapy patient setup.” J Appl Clin Med Phys 10, no. 4 (October 6, 2009): 273–80. https://doi.org/10.1120/jacmp.v10i4.2954.
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    • Stieler, Florian, Hui Yan, Frank Lohr, Frederik Wenz, and Fang-Fang Yin. “Development of a neuro-fuzzy technique for automated parameter optimization of inverse treatment planning.” Radiat Oncol 4 (September 25, 2009): 39. https://doi.org/10.1186/1748-717X-4-39.
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    • Zhu, X., J. D. Bourland, Y. Yuan, T. Zhuang, J. O’Daniel, D. Thongphiew, Q. J. Wu, S. K. Das, S. Yoo, and F. F. Yin. “Tradeoffs of integrating real-time tracking into IGRT for prostate cancer treatment.” Phys Med Biol 54, no. 17 (September 7, 2009): N393–401. https://doi.org/10.1088/0031-9155/54/17/N03.
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    • Klein, Eric E., Joseph Hanley, John Bayouth, Fang-Fang Yin, William Simon, Sean Dresser, Christopher Serago, et al. “Task Group 142 report: quality assurance of medical accelerators.” Med Phys 36, no. 9 (September 2009): 4197–4212. https://doi.org/10.1118/1.3190392.
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    • IMRT Documentation Working Group, Patricia, Timothy Holmes, Rupak Das, Daniel Low, Fang-Fang Yin, James Balter, Jatinder Palta, Patricia Eifel, and Patricia FASTRO. “American Society of Radiation Oncology recommendations for documenting intensity-modulated radiation therapy treatments.” Int J Radiat Oncol Biol Phys 74, no. 5 (August 1, 2009): 1311–18. https://doi.org/10.1016/j.ijrobp.2009.04.037.
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    • Sahgal, Arjun, Lijun Ma, Eric Chang, Almon Shiu, David A. Larson, Normand Laperriere, Fang-Fang Yin, et al. “Advances in technology for intracranial stereotactic radiosurgery.” Technol Cancer Res Treat 8, no. 4 (August 2009): 271–80. https://doi.org/10.1177/153303460900800404.
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    • Roper, Justin, James Bowsher, and Fang-Fang Yin. “On-board SPECT for localizing functional targets: a simulation study.” Med Phys 36, no. 5 (May 2009): 1727–35. https://doi.org/10.1118/1.3113902.
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    • Thongphiew, Danthai, Q Jackie Wu, W Robert Lee, Vira Chankong, Sua Yoo, Ryan McMahon, and Fang-Fang Yin. “Comparison of online IGRT techniques for prostate IMRT treatment: adaptive vs repositioning correction.” Med Phys 36, no. 5 (May 2009): 1651–62. https://doi.org/10.1118/1.3095767.
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    • Song, Haijun, James Bowsher, Shiva Das, and Fang-Fang Yin. “Tracking brachytherapy sources using emission imaging with one flat panel detector.” Med Phys 36, no. 4 (April 2009): 1109–11. https://doi.org/10.1118/1.3081402.
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    • Nelson, John W., David S. Yoo, John H. Sampson, Robert E. Isaacs, Nicole A. Larrier, Lawrence B. Marks, Fang-Fang Yin, Q Jackie Wu, Zhiheng Wang, and John P. Kirkpatrick. “Stereotactic body radiotherapy for lesions of the spine and paraspinal regions.” Int J Radiat Oncol Biol Phys 73, no. 5 (April 1, 2009): 1369–75. https://doi.org/10.1016/j.ijrobp.2008.06.1949.
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    • Song, Haijun, Zhe Chen, Ning Yue, Qingrong Wu, and Fang-Fang Yin. “Ice as a water-equivalent solid medium for brachytherapy dosimetric measurements.” Radiat Environ Biophys 48, no. 2 (April 2009): 145–51. https://doi.org/10.1007/s00411-008-0205-9.
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    • Zhang, Junan, Q Jackie Wu, Devon J. Godfrey, Toyosi Fatunase, Lawrence B. Marks, and Fang-Fang Yin. “Comparing digital tomosynthesis to cone-beam CT for position verification in patients undergoing partial breast irradiation.” Int J Radiat Oncol Biol Phys 73, no. 3 (March 1, 2009): 952–57. https://doi.org/10.1016/j.ijrobp.2008.10.036.
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    • Wang, Zhiheng, John W. Nelson, Sua Yoo, Q Jackie Wu, John P. Kirkpatrick, Lawrence B. Marks, and Fang-Fang Yin. “Refinement of treatment setup and target localization accuracy using three-dimensional cone-beam computed tomography for stereotactic body radiotherapy.” Int J Radiat Oncol Biol Phys 73, no. 2 (February 1, 2009): 571–77. https://doi.org/10.1016/j.ijrobp.2008.09.040.
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    • Jackie, Q. J., Z. Wang, J. P. Kirkpatrick, Z. Chang, J. J. Meyer, M. Lu, C. Huntzinger, and F. F. Yin. “Impact of collimator leaf width and treatment technique on stereotactic radiosurgery and radiotherapy plans for intra- and extracranial lesions.” Radiation Oncology 4 (January 21, 2009). https://doi.org/10.1186/1748-717X-4-3.
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    • Wu, Q Jackie, Zhiheng Wang, John P. Kirkpatrick, Zheng Chang, Jeffrey J. Meyer, Mei Lu, Calvin Huntzinger, and Fang-Fang Yin. “Impact of collimator leaf width and treatment technique on stereotactic radiosurgery and radiotherapy plans for intra- and extracranial lesions.” Radiat Oncol 4 (January 21, 2009): 3. https://doi.org/10.1186/1748-717X-4-3.
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    • Guan, H., R. Hammoud, and F. F. Yin. “A positioning QA procedure for 2D/2D (kV/MV) and 3D/3D (CT/CBCT) image matching for radiotherapy patient setup.” Journal of Applied Clinical Medical Physics 10, no. 4 (January 1, 2009): 273–80. https://doi.org/10.1120/jacmp.v10i4.2954.
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    • Chang, Zheng, Qing-San Xiang, Jim Ji, and Fang-Fang Yin. “Efficient multiple acquisitions by Skipped Phase Encoding and Edge Deghosting (SPEED) using shared spatial information.” Magn Reson Med 61, no. 1 (January 2009): 229–33. https://doi.org/10.1002/mrm.21809.
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    • Yoo, Sua, Q Jackie Wu, Devon Godfrey, Hui Yan, Lei Ren, Shiva Das, William R. Lee, and Fang-Fang Yin. “Clinical evaluation of positioning verification using digital tomosynthesis and bony anatomy and soft tissues for prostate image-guided radiotherapy.” Int J Radiat Oncol Biol Phys 73, no. 1 (January 1, 2009): 296–305. https://doi.org/10.1016/j.ijrobp.2008.09.006.
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    • Das, S. K., S. Chen, J. O. Deasy, S. Zhou, F. F. Yin, and L. B. Marks. “Decision fusion of machine learning models to predict radiotherapyinduced lung pneumonitis.” Proceedings  7th International Conference on Machine Learning and Applications, Icmla 2008, December 1, 2008, 545–50. https://doi.org/10.1109/ICMLA.2008.122.
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    • Luo, W., S. Yoo, Q. J. Wu, Z. Wang, and F. -. F. Yin. “Analysis of image quality for real-time target tracking using simultaneous kV-MV imaging.” Med Phys 35, no. 12 (December 2008): 5501–9. https://doi.org/10.1118/1.3002313.
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    • Das, Shiva K., Shifeng Chen, Joseph O. Deasy, Sumin Zhou, Fang-Fang Yin, and Lawrence B. Marks. “Combining multiple models to generate consensus: application to radiation-induced pneumonitis prediction.” Med Phys 35, no. 11 (November 2008): 5098–5109. https://doi.org/10.1118/1.2996012.
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    • Chang, Zheng, Zhiheng Wang, Q Jackie Wu, Hui Yan, Jim Bowsher, Junan Zhang, and Fang-Fang Yin. “Dosimetric characteristics of novalis Tx system with high definition multileaf collimator.” Med Phys 35, no. 10 (October 2008): 4460–63. https://doi.org/10.1118/1.2977668.
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    • Maurer, Jacqueline, Devon Godfrey, Zhiheng Wang, and Fang-Fang Yin. “On-board four-dimensional digital tomosynthesis: first experimental results.” Med Phys 35, no. 8 (August 2008): 3574–83. https://doi.org/10.1118/1.2953561.
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    • Ren, Lei, Junan Zhang, Danthai Thongphiew, Devon J. Godfrey, Q Jackie Wu, Su-Min Zhou, and Fang-Fang Yin. “A novel digital tomosynthesis (DTS) reconstruction method using a deformation field map.” Med Phys 35, no. 7Part1 (July 2008): 3110–15. https://doi.org/10.1118/1.2940725.
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    • Hu, Ye Angela, Haijun Song, Zhe Chen, Sumin Zhou, and Fang-Fang Yin. “Evaluation of an electron Monte Carlo dose calculation algorithm for electron beam.” J Appl Clin Med Phys 9, no. 3 (June 23, 2008): 1–15. https://doi.org/10.1120/jacmp.v9i3.2720.
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    • Wang, Ya-yi, Yong-zhen Peng, Fang-fang Yin, Jun Li, and Yu-kun Zhang. “[Characteristics and affecting factors of denitrifying phosphorus removal in two-sludge sequencing batch reactor].” Huan Jing Ke Xue 29, no. 6 (June 2008): 1526–32.
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    • Yan, Hui, Devon J. Godfrey, and Fang-Fang Yin. “Fast reconstruction of digital tomosynthesis using on-board images.” Med Phys 35, no. 5 (May 2008): 2162–69. https://doi.org/10.1118/1.2896077.
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    • Yan, Hui, Guopei Zhu, James Yang, Mei Lu, Munther Ajlouni, Jae Ho Kim, and Fang-Fang Yin. “The investigation on the location effect of external markers in respiratory-gated radiotherapy.” J Appl Clin Med Phys 9, no. 2 (April 16, 2008): 57–68. https://doi.org/10.1120/jacmp.v9i2.2758.
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    • Yan, Hui, and Fang-Fang Yin. “The application of distance transformation on parameter optimization of inverse planning in intensity-modulated radiation therapy.” J Appl Clin Med Phys 9, no. 2 (April 16, 2008): 30–45. https://doi.org/10.1120/jacmp.v9i2.2750.
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    • Wu, Q Jackie, Danthai Thongphiew, Zhiheng Wang, Vira Chankong, and Fang-Fang Yin. “The impact of respiratory motion and treatment technique on stereotactic body radiation therapy for liver cancer.” Med Phys 35, no. 4 (April 2008): 1440–51. https://doi.org/10.1118/1.2839095.
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    • Yin, Fang-Fang, Zhiheng Wang, Sua Yoo, Q Jackie Wu, John Kirkpatrick, Nicole Larrier, Jeffrey Meyer, Christopher G. Willett, and Lawrence B. Marks. “Integration of cone-beam CT in stereotactic body radiation therapy.” Technol Cancer Res Treat 7, no. 2 (April 2008): 133–39. https://doi.org/10.1177/153303460800700206.
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    • Fatunase, Toyosi, Zhiheng Wang, Sua Yoo, Jessica L. Hubbs, Robert G. Prosnitz, Fang-Fang Yin, and Lawrence B. Marks. “Assessment of the residual error in soft tissue setup in patients undergoing partial breast irradiation: results of a prospective study using cone-beam computed tomography.” Int J Radiat Oncol Biol Phys 70, no. 4 (March 15, 2008): 1025–34. https://doi.org/10.1016/j.ijrobp.2007.07.2344.
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    • Wu, Q Jackie, Danthai Thongphiew, Zhiheng Wang, Boonyanit Mathayomchan, Vira Chankong, Sua Yoo, W Robert Lee, and Fang-Fang Yin. “On-line re-optimization of prostate IMRT plans for adaptive radiation therapy.” Phys Med Biol 53, no. 3 (February 7, 2008): 673–91. https://doi.org/10.1088/0031-9155/53/3/011.
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    • Ren, Lei, Devon J. Godfrey, Hui Yan, Q Jackie Wu, and Fang-Fang Yin. “Automatic registration between reference and on-board digital tomosynthesis images for positioning verification.” Med Phys 35, no. 2 (February 2008): 664–72. https://doi.org/10.1118/1.2831903.
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    • Lee, Sung-Woo, Jian-Yue Jin, Huaiqun Guan, Flavious Martin, Jae Ho Kim, and Fang-Fang Yin. “Clinical assessment and characterization of a dual tube kilovoltage X-ray localization system in the radiotherapy treatment room.” J Appl Clin Med Phys 9, no. 1 (January 13, 2008): 1–15. https://doi.org/10.1120/jacmp.v9i1.2318.
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    • Chen, Shifeng, Sumin Zhou, Fang-Fang Yin, Lawrence B. Marks, and Shiva K. Das. “Using patient data similarities to predict radiation pneumonitis via a self-organizing map.” Phys Med Biol 53, no. 1 (January 7, 2008): 203–16. https://doi.org/10.1088/0031-9155/53/1/014.
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    • Hu, Y. A., H. Song, Z. Chen, S. Zhou, and F. F. Yin. “Evaluation of an electron Monte Carlo dose calculation algorithm for electron beams.” Journal of Applied Clinical Medical Physics 9, no. 3 (January 1, 2008): 1–15. https://doi.org/10.1120/jacmp.v9i3.2720.
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    • Kim, Sangroh, Terry T. Yoshizumi, Greta Toncheva, Sua Yoo, and Fang-Fang Yin. “Comparison of radiation doses between cone beam CT and multi detector CT: TLD measurements.” Radiat Prot Dosimetry 132, no. 3 (2008): 339–45. https://doi.org/10.1093/rpd/ncn305.
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    • Lee, S. W., J. Y. Jin, H. Guan, F. Martin, J. H. Kim, and F. F. Yin. “Clinical assessment and characterization of a dual tube kilovoltage X-ray localization system in the radiotherapy treatment room.” Journal of Applied Clinical Medical Physics 9, no. 1 (January 1, 2008): 1–15. https://doi.org/10.1120/jacmp.v9i1.2318.
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    • Thongphiew, D., V. Chankong, F. F. Yin, and Q. J. Wu. “An on-line adaptive radiation therapy system for intensity modulated radiation therapy: An application of multi-objective optimization.” Journal of Industrial and Management Optimization 4, no. 3 (January 1, 2008): 453–75. https://doi.org/10.3934/jimo.2008.4.453.
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    • Yan, H., G. Zhu, J. Yang, M. Ajlouni, J. H. Kim, and F. F. Yin. “Investigation of the location effect of external markers in respiratory-gated radiotherapy.” Journal of Applied Clinical Medical Physics 9, no. 2 (January 1, 2008): 57–68. https://doi.org/10.1120/jacmp.v9i2.2758.
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    • Yan, H., and F. F. Yin. “Application of distance transformation on parameter optimization of inverse planning in intensity-modulated radiation therapy.” Journal of Applied Clinical Medical Physics 9, no. 2 (January 1, 2008): 30–44. https://doi.org/10.1120/jacmp.v9i2.2750.
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    • Yan, Hui, Liwei Zhang, and Fang-Fang Yin. “A phantom study on target localization accuracy using cone-beam computed tomography.” Clin Med Oncol 2 (2008): 501–10. https://doi.org/10.4137/cmo.s808.
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    • Yan, Hui, Ren Lei, Jackie Wu, Fu Di, and Fang-Fang Yin. “Evaluation of Image Enhancement Method on Target Registration Using Cone Beam CT in Radiation Therapy.” Clin Med Oncol 2 (2008): 289–99. https://doi.org/10.4137/cmo.s512.
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    • Zhou, S. M., E. J. Hoppenworth, S. K. Das, Z. H. Wang, X. J. Sun, F. F. Yin, and M. W. Dewhirst. “Response to comments by Dr. Luijik and Dr. Schippers.” Medical Physics 35, no. 6 (January 1, 2008): 2560. https://doi.org/10.1118/1.2912367.
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    • Jin, Jian-Yue, Fang-Fang Yin, Stephen E. Tenn, Paul M. Medin, and Timothy D. Solberg. “Use of the BrainLAB ExacTrac X-Ray 6D system in image-guided radiotherapy.” Med Dosim 33, no. 2 (2008): 124–34. https://doi.org/10.1016/j.meddos.2008.02.005.
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    • Marks, Lawrence B., Kim L. Light, Jessica L. Hubbs, Debra L. Georgas, Ellen L. Jones, Melanie C. Wright, Christopher G. Willett, and Fang Fang Yin. “The impact of advanced technologies on treatment deviations in radiation treatment delivery.” Int J Radiat Oncol Biol Phys 69, no. 5 (December 1, 2007): 1579–86. https://doi.org/10.1016/j.ijrobp.2007.08.017.
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    • Wang, Zhiheng, Q Jackie Wu, Lawrence B. Marks, Nicole Larrier, and Fang-Fang Yin. “Cone-beam CT localization of internal target volumes for stereotactic body radiotherapy of lung lesions.” Int J Radiat Oncol Biol Phys 69, no. 5 (December 1, 2007): 1618–24. https://doi.org/10.1016/j.ijrobp.2007.08.030.
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    • Chen, Shifeng, Sumin Zhou, Fang-Fang Yin, Lawrence B. Marks, and Shiva K. Das. “Investigation of the support vector machine algorithm to predict lung radiation-induced pneumonitis.” Med Phys 34, no. 10 (October 2007): 3808–14. https://doi.org/10.1118/1.2776669.
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    • Murphy, Martin J., James Balter, Stephen Balter, Jose A. BenComo, Indra J. Das, Steve B. Jiang, C. M. Ma, et al. “The management of imaging dose during image-guided radiotherapy: report of the AAPM Task Group 75.” Med Phys 34, no. 10 (October 2007): 4041–63. https://doi.org/10.1118/1.2775667.
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    • Wu, Q Jackie, Devon J. Godfrey, Zhiheng Wang, Junan Zhang, Sumin Zhou, Sua Yoo, David M. Brizel, and Fang-Fang Yin. “On-board patient positioning for head-and-neck IMRT: comparing digital tomosynthesis to kilovoltage radiography and cone-beam computed tomography.” Int J Radiat Oncol Biol Phys 69, no. 2 (October 1, 2007): 598–606. https://doi.org/10.1016/j.ijrobp.2007.05.045.
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    • Yan, Hui, Lei Ren, Devon J. Godfrey, and Fang-Fang Yin. “Accelerating reconstruction of reference digital tomosynthesis using graphics hardware.” Med Phys 34, no. 10 (October 2007): 3768–76. https://doi.org/10.1118/1.2779945.
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    • Chen, Shifeng, Sumin Zhou, Junan Zhang, Fang-Fang Yin, Lawrence B. Marks, and Shiva K. Das. “A neural network model to predict lung radiation-induced pneumonitis.” Med Phys 34, no. 9 (September 2007): 3420–27. https://doi.org/10.1118/1.2759601.
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    • Zhang, Junan, and Fang-Fang Yin. “Minimizing image noise in on-board CT reconstruction using both kilovoltage and megavoltage beam projections.” Med Phys 34, no. 9 (September 2007): 3665–73. https://doi.org/10.1118/1.2768862.
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    • Godfrey, Devon J., Lei Ren, Hui Yan, Q. Wu, Sua Yoo, M. Oldham, and Fang Fang Yin. “Evaluation of three types of reference image data for external beam radiotherapy target localization using digital tomosynthesis (DTS).” Med Phys 34, no. 8 (August 2007): 3374–84. https://doi.org/10.1118/1.2756941.
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    • Kim, Jinkoo, Shidong Li, Deepak Pradhan, Rabih Hammoud, Qing Chen, Fang-Fang Yin, Yang Zhao, Jae Ho Kim, and Benjamin Movsas. “Comparison of similarity measures for rigid-body CT/Dual X-ray image registrations.” Technol Cancer Res Treat 6, no. 4 (August 2007): 337–46. https://doi.org/10.1177/153303460700600411.
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    • Das, Shiva K., Sumin Zhou, Junan Zhang, Fang-Fang Yin, Mark W. Dewhirst, and Lawrence B. Marks. “Predicting lung radiotherapy-induced pneumonitis using a model combining parametric Lyman probit with nonparametric decision trees.” Int J Radiat Oncol Biol Phys 68, no. 4 (July 15, 2007): 1212–21. https://doi.org/10.1016/j.ijrobp.2007.03.064.
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    • Chen, M., Z. Y. Liu, Y. Liu, Y. C. Ding, J. Li, F. Yin, and J. L. Zheng. “Application of circumferencial myocardial function maps of tissue Doppler in patients with acute myocardial infarction.” Chinese Journal of Medical Imaging Technology 23, no. 7 (July 1, 2007): 998–1001.
    • Zhou, Su-Min, Shiva K. Das, Zhiheng Wang, Xuejun Sun, Mark Dewhirst, Fang-Fang Yin, and Lawrence B. Marks. “Self-consistent tumor control probability and normal tissue complication probability models based on generalized EUDa).” Med Phys 34, no. 7 (July 2007): 2807–15. https://doi.org/10.1118/1.2740010.
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    • Barton, Kenneth N., Svend O. Freytag, Teamour Nurushev, Sua Yoo, Mei Lu, Fang-Fang Yin, Shidong Li, Benjamin Movsas, Jae Ho Kim, and Stephen L. Brown. “A model for optimizing adenoviral delivery in human cancer gene therapy trials.” Hum Gene Ther 18, no. 6 (June 2007): 562–72. https://doi.org/10.1089/hum.2007.004.
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    • Wang, Zhiheng, Christopher G. Willett, and Fang-Fang Yin. “Reduction of organ motion by combined cardiac gating and respiratory gating.” Int J Radiat Oncol Biol Phys 68, no. 1 (May 1, 2007): 259–66. https://doi.org/10.1016/j.ijrobp.2006.11.057.
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    • Yan, Hui, Fang-Fang Yin, and Christopher Willett. “Evaluation of an artificial intelligence guided inverse planning system: clinical case study.” Radiother Oncol 83, no. 1 (April 2007): 76–85. https://doi.org/10.1016/j.radonc.2007.02.013.
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    • Ahmed, S., S. Das, and F. Yin. “TH‐D‐M100E‐07: Determining the Geometric and Dosimetric Accuracy of MRI Based IMRT Treatment Plan for Patients with Prostate, Brain, and Head and Neck Cancers.” Medical Physics 34, no. 6 (January 1, 2007): 2644. https://doi.org/10.1118/1.2761734.
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    • Meyer, Jeffrey, Brian Czito, Fang-Fang Yin, and Chirstopher Willett. “Advanced radiation therapy technologies in the treatment of rectal and anal cancer: intensity-modulated photon therapy and proton therapy.” Clin Colorectal Cancer 6, no. 5 (January 2007): 348–56. https://doi.org/10.3816/CCC.2007.n.003.
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    • Roper, J., J. Bowsher, and F. Yin. “SU‐EE‐A3‐06: Onboard SPECT: Functional‐Image‐Based Target Localization.” Medical Physics 34, no. 6 (January 1, 2007): 2334–35. https://doi.org/10.1118/1.2760363.
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    • Yin, F. “MO‐D‐M100F‐01: Emerging Techniques Using Digital Tomosynthesis.” Medical Physics 34, no. 6 (January 1, 2007): 2518. https://doi.org/10.1118/1.2761225.
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    • Yin, F., S. Yoo, D. Moseley, M. Sharpe, and J. Siewerdsen. “MO‐SAMS‐AUD‐01: Daily Localization — I: Kilovolt Imaging.” Medical Physics 34, no. 6 (January 1, 2007): 2511–12. https://doi.org/10.1118/1.2761197.
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    • Zhang, L., W. lu, F. Yin, and Y. Zhang. “SU‐FF‐I‐37: An Adaptive Simultaneous Algebraic Reconstruction Technique.” Medical Physics 34, no. 6 (January 1, 2007): 2346. https://doi.org/10.1118/1.2760414.
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    • Hanna, G., Z. Wang, and F. Yin. “SU‐FF‐T‐419: Time‐Delay Measurement of Phase Gated Treatment with a Varian Real‐Time Position Management System Using Computed Radiography.” Medical Physics 34, no. 6 (January 1, 2007): 2498. https://doi.org/10.1118/1.2761144.
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    • McGuire, Sarah M., Sumin Zhou, Lawrence B. Marks, Mark Dewhirst, Fang-Fang Yin, and Shiva K. Das. “A methodology for using SPECT to reduce intensity-modulated radiation therapy (IMRT) dose to functioning lung.” Int J Radiat Oncol Biol Phys 66, no. 5 (December 1, 2006): 1543–52. https://doi.org/10.1016/j.ijrobp.2006.07.1377.
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    • Yoo, Sua, and Fang-Fang Yin. “Dosimetric feasibility of cone-beam CT-based treatment planning compared to CT-based treatment planning.” Int J Radiat Oncol Biol Phys 66, no. 5 (December 1, 2006): 1553–61. https://doi.org/10.1016/j.ijrobp.2006.08.031.
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    • Yan, Hui, Fang-Fang Yin, Guo-Pei Zhu, Munther Ajlouni, and Jae Ho Kim. “The correlation evaluation of a tumor tracking system using multiple external markers.” Med Phys 33, no. 11 (November 2006): 4073–84. https://doi.org/10.1118/1.2358830.
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    • Yoo, Sua, Gwe-Ya Kim, Rabih Hammoud, Eric Elder, Todd Pawlicki, Huaiqun Guan, Timothy Fox, Gary Luxton, Fang-Fang Yin, and Peter Munro. “A quality assurance program for the on-board imager®.” Med Phys 33, no. 11 (November 2006): 4431–47. https://doi.org/10.1118/1.2362872.
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    • Godfrey, Devon J., Fang-Fang Yin, Mark Oldham, Sua Yoo, and Christopher Willett. “Digital tomosynthesis with an on-board kilovoltage imaging device.” Int J Radiat Oncol Biol Phys 65, no. 1 (May 1, 2006): 8–15. https://doi.org/10.1016/j.ijrobp.2006.01.025.
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    • Rock, Jack P., Samuel Ryu, Mohammad S. Shukairy, Fang-Fang Yin, Aktham Sharif, Faye Schreiber, Muwaffak Abdulhak, Jae Ho Kim, and Mark L. Rosenblum. “Postoperative radiosurgery for malignant spinal tumors.” Neurosurgery 58, no. 5 (May 2006): 891–98. https://doi.org/10.1227/01.NEU.0000209913.72761.4F.
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    • Yin, Fang-Fang, Shiva Das, John Kirkpatrick, Mark Oldham, Zhiheng Wang, and Su-Min Zhou. “Physics and imaging for targeting of oligometastases.” Semin Radiat Oncol 16, no. 2 (April 2006): 85–101. https://doi.org/10.1016/j.semradonc.2005.12.004.
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    • Jin, Jian-Yue, Munther Ajlouni, Qing Chen, Fang-Fang Yin, and Benjamin Movsas. “A technique of using gated-CT images to determine internal target volume (ITV) for fractionated stereotactic lung radiotherapy.” Radiother Oncol 78, no. 2 (February 2006): 177–84. https://doi.org/10.1016/j.radonc.2005.11.012.
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    • Yan, Hui, Fang-Fang Yin, Guo-Pei Zhu, Munther Ajlouni, and Jae Ho Kim. “Adaptive prediction of internal target motion using external marker motion: a technical study.” Phys Med Biol 51, no. 1 (January 7, 2006): 31–44. https://doi.org/10.1088/0031-9155/51/1/003.
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    • Oldham, M., P. Guo, J. Adamovics, H. Sakhalkar, Z. Wang, and Ff Yin. “Towards four dimensional (4D) dosimetry for radiation-therapy.” J Phys Conf Ser 56 (2006): 225–27. https://doi.org/10.1088/1742-6596/56/1/034.
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    • Yin, Fang-Fang, Huaiqun Guan, and Wenkai Lu. “A technique for on-board CT reconstruction using both kilovoltage and megavoltage beam projections for 3D treatment verification.” Med Phys 32, no. 9 (September 2005): 2819–26. https://doi.org/10.1118/1.1997307.
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    • Jin, Jian-Yue, and Fang-Fang Yin. “Time delay measurement for linac based treatment delivery in synchronized respiratory gating radiotherapy.” Med Phys 32, no. 5 (May 2005): 1293–96. https://doi.org/10.1118/1.1896452.
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    • Kim, Jinkoo, Fang-Fang Yin, Yang Zhao, and Jae Ho Kim. “Effects of x-ray and CT image enhancements on the robustness and accuracy of a rigid 3D/2D image registration.” Med Phys 32, no. 4 (April 2005): 866–73. https://doi.org/10.1118/1.1869592.
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    • Jin, Jian-Yue, Fang-Fang Yin, Samuel Ryu, Munther Ajlouni, and Jae Ho Kim. “Dosimetric study using different leaf-width MLCs for treatment planning of dynamic conformal arcs and intensity-modulated radiosurgery.” Med Phys 32, no. 2 (February 2005): 405–11. https://doi.org/10.1118/1.1842911.
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    • Das, S., and F. Yin. “WE‐D‐T‐6E‐02: A Clinical Planning Tool for Optimization of Intensity Modulated Radiotherapy Parameters.” Medical Physics 32, no. 6 (January 1, 2005): 2139. https://doi.org/10.1118/1.1998571.
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    • Guan, H., R. Hammoud, D. Pradhan, F. Yin, J. Kim, M. Ajlouni, and B. Movsas. “SU‐FF‐T‐61: A Pseudo‐Tangential IMRT Technique for the Whole Large Left Breast Radiation Therapy Using Helios/Eclipse System.” Medical Physics 32, no. 6 (January 1, 2005): 1963. https://doi.org/10.1118/1.1997732.
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    • Hammoud, R., H. Guan, F. Yin, D. Pradhan, and B. Movsas. “SU‐FF‐T‐190: Daily Quality Assurance (QA) Procedure of On‐Board Imager (OBI).” Medical Physics 32, no. 6 (January 1, 2005): 1993. https://doi.org/10.1118/1.1997918.
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    • Yoo, S., R. Hammoud, F. Yin, H. Guan, D. Pradhan, and B. Movsas. “SU‐FF‐T‐212: Quality Assurance (QA) Procedure of On‐Board Imager (OBI) for Portal Imaging.” Medical Physics 32, no. 6 (January 1, 2005): 1998. https://doi.org/10.1118/1.1997940.
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    • Lu, Wenkai, and Fang-Fang Yin. “Adaptive algebraic reconstruction technique.” Med Phys 31, no. 12 (December 2004): 3222–30. https://doi.org/10.1118/1.1812606.
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    • Yin, Fang-Fang, Samuel Ryu, Munther Ajlouni, Hui Yan, Jian-Yue Jin, Sung-Woo Lee, Jinkoo Kim, Jack Rock, Mark Rosenblum, and Jae Ho Kim. “Image-guided procedures for intensity-modulated spinal radiosurgery. Technical note.” J Neurosurg 101 Suppl 3 (November 2004): 419–24.
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    • Gutman, George, Evgueni Sozontov, Emil Strumban, Fang-Fang Yin, Sung-Woo Lee, and Jae Ho Kim. “A novel needle-based miniature x-ray generating system.” Phys Med Biol 49, no. 20 (October 21, 2004): 4677–88. https://doi.org/10.1088/0031-9155/49/20/001.
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    • Rock, Jack P., Samuel Ryu, and Fang-Fang Yin. “Novalis radiosurgery for metastatic spine tumors.” Neurosurg Clin N Am 15, no. 4 (October 2004): 503–9. https://doi.org/10.1016/j.nec.2004.04.014.
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    • Ryu, Samuel, Mumtaz Khan, Fang-Fang Yin, Adrianne Concus, Munther Ajlouni, Michael S. Benninger, and Jae Ho Kim. “Image-guided radiosurgery of head and neck cancers.” Otolaryngol Head Neck Surg 130, no. 6 (June 2004): 690–97. https://doi.org/10.1016/j.otohns.2003.10.009.
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    • Barton, Kenneth N., Xueqing Xia, Hui Yan, Hans Stricker, Gregory Heisey, Fang-Fang Yin, Tavarekere N. Nagaraja, et al. “A quantitative method for measuring gene expression magnitude and volume delivered by gene therapy vectors.” Mol Ther 9, no. 4 (April 2004): 625–31. https://doi.org/10.1016/j.ymthe.2004.01.011.
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    • Rock, Jack P., Samuel Ryu, Fang-Fang Yin, Faye Schreiber, and Muwaffak Abdulhak. “The evolving role of stereotactic radiosurgery and stereotactic radiation therapy for patients with spine tumors.” J Neurooncol 69, no. 1–3 (2004): 319–34. https://doi.org/10.1023/b:neon.0000041890.01837.53.
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    • Yan, Hui, Fang-Fang Yin, and Jae Ho Kim. “A phantom study on the positioning accuracy of the Novalis Body system.” Med Phys 30, no. 12 (December 2003): 3052–60. https://doi.org/10.1118/1.1626122.
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    • Yan, Hui, Fang-Fang Yin, Huai-qun Guan, and Jae Ho Kim. “AI-guided parameter optimization in inverse treatment planning.” Phys Med Biol 48, no. 21 (November 7, 2003): 3565–80. https://doi.org/10.1088/0031-9155/48/21/008.
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    • Yan, Hui, Fang-Fang Yin, Huaiqun Guan, and Jae Ho Kim. “Fuzzy logic guided inverse treatment planning.” Med Phys 30, no. 10 (October 2003): 2675–85. https://doi.org/10.1118/1.1600739.
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    • Barton, Kenneth N., Donald Tyson, Hans Stricker, Young S. Lew, Gregory Heisey, Sweaty Koul, Alberto de la Zerda, et al. “GENIS: gene expression of sodium iodide symporter for noninvasive imaging of gene therapy vectors and quantification of gene expression in vivo.” Mol Ther 8, no. 3 (September 2003): 508–18. https://doi.org/10.1016/s1525-0016(03)00153-9.
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    • Zhu, Jingeng, Fang-Fang Yin, and Jae Ho Kim. “Point dose verification for intensity modulated radiosurgery using Clarkson's method.” Med Phys 30, no. 8 (August 2003): 2218–21. https://doi.org/10.1118/1.1589495.
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    • Ryu, Samuel, Fang Fang Yin, Jack Rock, Jingeng Zhu, Archie Chu, Eduard Kagan, Lisa Rogers, Munther Ajlouni, Mark Rosenblum, and Jae Ho Kim. “Image-guided and intensity-modulated radiosurgery for patients with spinal metastasis.” Cancer 97, no. 8 (April 15, 2003): 2013–18. https://doi.org/10.1002/cncr.11296.
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    • Yin, Fang-Fang, Samuel Ryu, Munther Ajlouni, Jingeng Zhu, Hui Yan, Harrison Guan, Kathleen Faber, et al. “A technique of intensity-modulated radiosurgery (IMRS) for spinal tumors.” Med Phys 29, no. 12 (December 2002): 2815–22. https://doi.org/10.1118/1.1521722.
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    • Rock, Jack, Max Kole, Fang-Fang Yin, Samuel Ryu, Jorge Guttierez, and Mark Rosenblum. “Radiosurgical treatment for Ewing's sarcoma of the lumbar spine: case report.” Spine (Phila Pa 1976) 27, no. 21 (November 1, 2002): E471–75. https://doi.org/10.1097/00007632-200211010-00021.
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    • Guan, Huaiqun, Fang-Fang Yin, and Jae Ho Kim. “Accuracy of inhomogeneity correction in photon radiotherapy from CT scans with different settings.” Phys Med Biol 47, no. 17 (September 7, 2002): N223–31. https://doi.org/10.1088/0031-9155/47/17/402.
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    • Yin, Fang-Fang, Jingeng Zhu, Hui Yan, Haiqun Gaun, Rabih Hammoud, Samuel Ryu, and Jae H. Kim. “Dosimetric characteristics of Novalis shaped beam surgery unit.” Med Phys 29, no. 8 (August 2002): 1729–38. https://doi.org/10.1118/1.1494830.
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    • Ghanei, A., H. Soltanian-Zadeh, A. Ratkewicz, and F. F. Yin. “A three-dimensional deformable model for segmentation of human prostate from ultrasound images.” Med Phys 28, no. 10 (October 2001): 2147–53. https://doi.org/10.1118/1.1388221.
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    • Yin, F., J. G. Kim, C. Haughton, S. L. Brown, M. Ajlouni, M. Stronati, N. Pamukov, and J. H. Kim. “Extracranial radiosurgery: immobilizing liver motion in dogs using high-frequency jet ventilation and total intravenous anesthesia.” Int J Radiat Oncol Biol Phys 49, no. 1 (January 1, 2001): 211–16. https://doi.org/10.1016/s0360-3016(00)01370-5.
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    • Guan, H., F. F. Yin, Y. Zhu, and J. H. Kim. “Adaptive portal CT reconstruction: a simulation study.” Med Phys 27, no. 10 (October 2000): 2209–14. https://doi.org/10.1118/1.1312193.
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    • Li, R. P., and F. F. Yin. “Optimization of inverse treatment planning using a fuzzy weight function.” Med Phys 27, no. 4 (April 2000): 691–700. https://doi.org/10.1118/1.598931.
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    • Li, R. P., F. F. Yin, and M. Mukaidono. “Soft optimization with fuzzy weight function.” Ieee International Conference on Fuzzy Systems 2 (December 1, 1999).
    • Gao, Q., F. F. Yin, and K. Nie. “Treatment field shape verification using elliptic Fourier transform.” Med Phys 26, no. 11 (November 1999): 2415–21. https://doi.org/10.1118/1.598759.
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    • Tishgarten, T., F. F. Yin, K. M. Faucher, R. A. Dluhy, T. R. Grant, G. Fischer von Mollard, T. H. Stevens, and L. A. Lipscomb. “Structures of yeast vesicle trafficking proteins.” Protein Sci 8, no. 11 (November 1999): 2465–73. https://doi.org/10.1110/ps.8.11.2465.
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    • Gao, Q., and F. F. Yin. “Two-dimensional direction-based interpolation with local centered moments.” Graphical Models and Image Processing 61, no. 6 (January 1, 1999): 323–39. https://doi.org/10.1006/gmip.1999.0504.
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    • Liu, Y., F. F. Yin, and Q. Gao. “Variation method for inverse treatment planning.” Medical Physics 26, no. 3 (January 1, 1999): 356–63. https://doi.org/10.1118/1.598525.
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    • Yin, F. F., Q. Gao, H. Xie, D. F. Nelson, Y. Yu, W. E. Kwok, S. Totterman, M. C. Schell, and P. Rubin. “MR image-guided portal verification for brain treatment field.” Int J Radiat Oncol Biol Phys 40, no. 3 (February 1, 1998): 703–11. https://doi.org/10.1016/s0360-3016(97)00763-3.
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    • Gao, Q., and F. F. Yin. “Two-dimensional refinement scheme of direction-based interpolation with discrete orthogonal polynomial decomposition.” Proceedings of Spie  the International Society for Optical Engineering 3031 (December 1, 1997): 12–18.
    • Yin, F. F., and Q. Gao. “Oncologic image compression using both wavelet and masking techniques.” Med Phys 24, no. 12 (December 1997): 2038–42. https://doi.org/10.1118/1.598118.
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    • Yin, F. F., K. Nie, L. Chen, and C. W. Chen. “Automated extraction of pelvic features in portal and simulation images.” Proceedings of Spie  the International Society for Optical Engineering 2710 (December 1, 1996): 1020–23. https://doi.org/10.1117/12.237910.
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    • Chang, K. S., F. F. Yin, and K. W. Nie. “The effect of detector size to the broadening of the penumbra--a computer simulated study.” Med Phys 23, no. 8 (August 1996): 1407–11. https://doi.org/10.1118/1.597724.
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    • Yin, F. F., P. Rubin, M. C. Schell, R. Wynn, R. F. Raubertas, G. Uschold, A. Sandhu, and D. F. Nelson. “An observer study for direct comparison of clinical efficacy of electronic to film portal images.” Int J Radiat Oncol Biol Phys 35, no. 5 (July 15, 1996): 985–91. https://doi.org/10.1016/0360-3016(96)00205-2.
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    • Chen, C. W., W. Lai, F. F. Yin, and L. Chen. “Portal image feature extraction by hierarchical region processing technique.” Proceedings of the Ieee International Conference on Systems, Man and Cybernetics 4 (December 1, 1995): 3561–66.
    • Yin, F. F. “Physical penumbra change of beam profile due to film digitization.” Med Phys 22, no. 6 (June 1995): 803–5. https://doi.org/10.1118/1.597481.
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    • Yin, F. F., M. C. Schell, and P. Rubin. “A technique of automating compensator design for lung inhomogeneity correction using an electron portal imaging device.” Med Phys 21, no. 11 (November 1994): 1729–32. https://doi.org/10.1118/1.597273.
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    • Yin, F. F., M. C. Schell, and P. Rubin. “Input/output characteristics of a matrix ion-chamber electronic portal imaging device.” Med Phys 21, no. 9 (September 1994): 1447–54. https://doi.org/10.1118/1.597190.
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    • Yin, F. F., M. L. Giger, K. Doi, C. J. Vyborny, and R. A. Schmidt. “Computerized detection of masses in digital mammograms: automated alignment of breast images and its effect on bilateral-subtraction technique.” Med Phys 21, no. 3 (March 1994): 445–52. https://doi.org/10.1118/1.597307.
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    • Nishikawa, R. M., M. L. Giger, K. Doi, C. E. Metz, F. F. Yin, C. J. Vyborny, and R. A. Schmidt. “Effect of case selection on the performance of computer-aided detection schemes.” Med Phys 21, no. 2 (February 1994): 265–69. https://doi.org/10.1118/1.597287.
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    • Yin, F. F., M. L. Giger, K. Doi, C. J. Vyborny, and R. A. Schmidt. “Computerized detection of masses in digital mammograms: investigation of feature-analysis techniques.” J Digit Imaging 7, no. 1 (February 1994): 18–26. https://doi.org/10.1007/BF03168475.
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    • Yin, F. F., M. L. Giger, C. J. Vyborny, K. Doi, and R. A. Schmidt. “Comparison of bilateral-subtraction and single-image processing techniques in the computerized detection of mammographic masses.” Invest Radiol 28, no. 6 (June 1993): 473–81. https://doi.org/10.1097/00004424-199306000-00001.
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    • Yin, F. F., M. L. Giger, K. Doi, H. Yoshimura, X. W. Xu, and R. M. Nishikawa. “Evaluation of imaging properties of a laser film digitizer.” Phys Med Biol 37, no. 1 (January 1992): 273–80. https://doi.org/10.1088/0031-9155/37/1/020.
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    • MacMahon, H., S. Sanada, K. Doi, M. Giger, X. W. Xu, F. F. Yin, S. M. Montner, and M. Carlin. “Direct comparison of conventional and computed radiography with a dual-image recording technique.” Radiographics 11, no. 2 (March 1991): 259–68. https://doi.org/10.1148/radiographics.11.2.2028063.
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    • Giger, M. L., R. M. Nishikawa, K. Doi, F. F. Yin, C. J. Vyborny, R. A. Schmidt, C. E. Metz, Y. Wu, H. MacMahon, and H. Yoshimura. “Development of a 'smart' workstation for use in mammography.” Proceedings of Spie  the International Society for Optical Engineering 1445 (January 1, 1991): 101–3.
    • Yin, F. F., M. L. Giger, K. Doi, C. J. Vyborny, R. A. Schmidt, and C. E. Metz. “Computer-vision system for the detection and characterization of masses for use in mammographic screening programs.” Proceedings of Spie  the International Society for Optical Engineering 1396 (January 1, 1991): 2–4.
    • MacMahon, H., K. Doi, S. Sanada, S. M. Montner, M. L. Giger, C. E. Metz, N. Nakamori, F. F. Yin, X. W. Xu, and H. Yonekawa. “Data compression: effect on diagnostic accuracy in digital chest radiography.” Radiology 178, no. 1 (January 1991): 175–79. https://doi.org/10.1148/radiology.178.1.1984299.
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    • Sanada, S., K. Doi, X. W. Xu, F. F. Yin, M. L. Giger, and H. MacMahon. “Comparison of imaging properties of a computed radiography system and screen-film systems.” Med Phys 18, no. 3 (1991): 414–20. https://doi.org/10.1118/1.596688.
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    • Yin, F. F., M. L. Giger, K. Doi, C. E. Metz, C. J. Vyborny, and R. A. Schmidt. “Computerized detection of masses in digital mammograms: analysis of bilateral subtraction images.” Med Phys 18, no. 5 (1991): 955–63. https://doi.org/10.1118/1.596610.
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    • Giger, M. L., F. F. Yin, K. Doi, C. E. Metz, R. A. Schmidt, and C. J. Vyborny. “Investigation of methods for the computerized detection and analysis of mammographic masses.” Proceedings of Spie  the International Society for Optical Engineering 1233 (December 1, 1990): 183–84.
    • Montner, S., X. W. Xu, M. Tsuzaka, K. Doi, H. Macmahon, H. Yoshimura, S. Sanada, M. L. Giger, and F. F. Yin. “Evaluation of basic imaging properties of a new digital chest system.” Proceedings of Spie  the International Society for Optical Engineering 1231 (July 1, 1990): 390–93. https://doi.org/10.1117/12.18815.
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    • Giger, M. L., K. Doi, H. MacMahon, C. E. Metz, and F. F. Yin. “Pulmonary nodules: computer-aided detection in digital chest images.” Radiographics 10, no. 1 (January 1990): 41–51. https://doi.org/10.1148/radiographics.10.1.2296696.
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    • Yin, F. F., M. L. Giger, and K. Doi. “Measurement of the presampling modulation transfer function of film digitizers using a curve fitting technique.” Med Phys 17, no. 6 (1990): 962–66. https://doi.org/10.1118/1.596463.
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    • Giger, M. L., K. Doi, H. MacMahon, and F. F. Yin. “Image-processing techniques used in the computer-aided detection of radiographic lesions in anatomic background.” Proceedings of Spie  the International Society for Optical Engineering 914 (June 27, 1988): 635–37. https://doi.org/10.1117/12.968691.
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    • Giles, William M., Edward T. Cullom, Obed A-O Laryea, Ahmad Nobah, Victor G. L. Alves, Fang-Fang Yin, John P. Kirkpatrick, and Justus D. Adamson. “Radiosurgery treatment planning using conformal arc informed volumetric modulated arc therapy.” Med Dosim 46, no. 1 (n.d.): 3–12. https://doi.org/10.1016/j.meddos.2020.06.001.
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    • Morrison, Jay, Rodney Hood, Fang-Fang Yin, Joseph K. Salama, John Kirkpatrick, and Justus Adamson. “Is a single isocenter sufficient for volumetric modulated arc therapy radiosurgery when multiple itracranial metastases are spatially dispersed?” Med Dosim 41, no. 4 (n.d.): 285–89. https://doi.org/10.1016/j.meddos.2016.06.007.
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  • Book Sections

    • Ren, Lei, and Fangfang Yin. “Advances in Patient Setup and Target Localization.” In Advanced and Emerging Technologies in Radiation Oncology Physics. CRC Press, 2018.
    • Godfrey, D. J., L. Ren, Q. Wu, and F. Yin. “Tomosynthesis Applications in Radiation Oncology.” In Tomosynthesis Imaging. Taylor & Francis, 2016.
    • McMahon, R., and F. F. Yin. “Image-guided radiation therapy and frameless stereotactic radiation therapy.” In Stereotactic Radiosurgery and Stereotactic Body Radiation Therapy, 211–29, 2014. https://doi.org/10.1201/b16776-17.
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    • Wu, Q. J., D. J. Godfrey, L. Ren, S. Yoo, and F. Yin. “On-Board Digital Tomosynthesis: An Emerging New Technology for IGRT.” In Image-Guided Radiation Therapy, edited by D. Bourland. CRC Press, 2012.
    • Wu, Q Jackie, Devon Godfrey, Lei Ren, Sua Yoo, and Fang-Fang Yin. “On-Board Digital Tomosynthesis: An Emerging New Technology for Image-Guided Radiation Therapy.” In IMAGE-GUIDED RADIATION THERAPY, 187–201, 2012.
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    • Chang, Z., J. O’Daniel, and F. F. Yin. “Quality Assurance in Adaptive Radiation Therapy.” In Adaptive Radiation Therapy, 229–44, 2011. https://doi.org/10.1201/b10517-22.
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  • Conference Papers

    • Yang, Zhenyu, Zongsheng Hu, Hangjie Ji, Kyle Lafata, Eugene Vaios, Scott Floyd, Fang-Fang Yin, and Chunhao Wang. “A neural ordinary differential equation model for visualizing deep neural network behaviors in multi-parametric MRI-based glioma segmentation.” In Med Phys, 2023. https://doi.org/10.1002/mp.16286.
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    • Hu, Zongsheng, Zhenyu Yang, Kyle J. Lafata, Fang-Fang Yin, and Chunhao Wang. “A radiomics-boosted deep-learning model for COVID-19 and non-COVID-19 pneumonia classification using chest x-ray images.” In Med Phys, 49:3213–22, 2022. https://doi.org/10.1002/mp.15582.
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    • Wang, Wentao, Yang Sheng, Manisha Palta, Brian Czito, Christopher Willett, Fang-Fang Yin, Qiuwen Wu, Yaorong Ge, and Q Jackie Wu. “Transfer learning for fluence map prediction in adrenal stereotactic body radiation therapy.” In Phys Med Biol, Vol. 66, 2021. https://doi.org/10.1088/1361-6560/ac3c14.
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    • Wang, C., Y. Xie, Z. Hu, F. F. Yin, Z. Reitman, and Y. Cui. “A Dosimetric Study Comparing Two Beam Arrangement Strategies in Fractionated Thoracic Spine Stereotactic Body Radiotherapy (SBRT) Planning.” In International Journal of Radiation Oncology, Biology, Physics, 111:e557, 2021. https://doi.org/10.1016/j.ijrobp.2021.07.1510.
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    • Yin, Fang-Fang. “Radiomics and Outcome Prediction.” In Medical Physics, Vol. 48, 2021.
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    • Liu, C., K. Lafata, Y. Chang, F. F. Yin, and C. Wang. “RETRACTED: An Encoder-Decoder Based Deep Learning AI agent for Spatial Dose Distribution Prediction: A Study of Complex Head-and-Neck IMRT Application.” In International Journal of Radiation Oncology, Biology, Physics, 108:S128, 2020. https://doi.org/10.1016/j.ijrobp.2020.07.854.
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    • Wang, Chunhao, Chenyang Liu, Yushi Chang, Kyle Lafata, Yunfeng Cui, Jiahan Zhang, Yang Sheng, Yvonne Mowery, David Brizel, and Fang-Fang Yin. “Dose-Distribution-Driven PET Image-Based Outcome Prediction (DDD-PIOP): A Deep Learning Study for Oropharyngeal Cancer IMRT Application.” In Frontiers in Oncology, Vol. 10, 2020.
    • Yin, Fang-Fang, Ying Xiao, M. Giger, J. Deasy, I. Tai, and F. Yin. “Advances of Radiomics and Genomics in Cancer Management.” In Medical Physics, 47:E348–E348, 2020.
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    • Zhang, L., F. F. Yin, and J. Cai. “Liver 4D-MRI: An Image Mutual Information based Retrospective Self-sorting Method.” In 2019 International Conference on Medical Imaging Physics and Engineering, Icmipe 2019, 2019. https://doi.org/10.1109/ICMIPE47306.2019.9098165.
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    • Adamson, J., J. Carroll, M. Trager, P. Yoon, J. Kodra, F. F. Yin, E. Maynard, M. Hilts, M. Oldham, and A. Jirasik. “Feasibility of radiosurgery dosimetry using NIPAM 3D dosimeters and x-ray CT.” In Journal of Physics: Conference Series, Vol. 1305, 2019. https://doi.org/10.1088/1742-6596/1305/1/012004.
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    • Sajja, S., M. Hashemi, C. Huynh, J. G. Mainprize, M. Eriksson, Y. Lee, H. Nordstrom, et al. “Investigation of calibration-based projection domain dual energy decomposition CBCT technique for brain radiotherapy applications.” In Progress in Biomedical Optics and Imaging  Proceedings of Spie, Vol. 10948, 2019. https://doi.org/10.1117/12.2510430.
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    • Sheng, Y., J. Zhang, C. Wang, F. F. Yin, Q. J. Wu, and Y. Ge. “Incorporating Case-Based Reasoning for Radiation Therapy Knowledge Modeling: A Pelvic Case Study.” In Technology in Cancer Research and Treatment, Vol. 18, 2019. https://doi.org/10.1177/1533033819874788.
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    • Gang, Y., X. Wang, R. Chen, F. Yin, X. Liu, Z. Wang, X. Hu, and S. Zeng. “High-resolution imaging immunolabeled large tissues.” In Optics Infobase Conference Papers, Vol. Part F70-PIBM 2017, 2017. https://doi.org/10.1364/PIBM.2017.W3A.127.
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    • Guo, W., X. Liu, Y. Gang, F. Yin, P. Li, F. Huang, N. Li, et al. “A simple, rapid method to precisely locate mRNAs of intact mouse brain via fluorescence tomography.” In Optics Infobase Conference Papers, Vol. Part F70-PIBM 2017, 2017. https://doi.org/10.1364/PIBM.2017.W3A.44.
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    • Stanhope, Carl, Zheng Chang, Zhiheng Wang, Fang-Fang Yin, Grace Kim, Joseph K. Salama, John Kirkpatrick, and Justus Adamson. “Physics considerations for single-isocenter, volumetric modulated arc radiosurgery for treatment of multiple intracranial targets.” In Pract Radiat Oncol, 6:207–13, 2016. https://doi.org/10.1016/j.prro.2015.10.010.
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    • Gao, R., H. Wang, Y. Zhang, R. Mao, L. Ren, and F. Yin. “SU-E-I-40: Phantom Research On Monochromatic Images Taken by Dual CBCT with Multiple Energy Sets.” In Med Phys, 42:3250, 2015. https://doi.org/10.1118/1.4924037.
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    • Harris, W., F. Yin, J. Cai, Y. Zhang, and L. Ren. “WE-G-BRD-06: Volumetric Cine MRI (VC-MRI) Estimated Based On Prior Knowledge for On-Board Target Localization.” In Med Phys, 42:3689, 2015. https://doi.org/10.1118/1.4926062.
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    • Harris, W., Y. Zhang, F. Yin, and L. Ren. “TH-CD-303-06: Deformable Registration-Based Image Estimation Method for 4D CBCT Using Region-Based PCA.” In Med Phys, 42:3729, 2015. https://doi.org/10.1118/1.4926241.
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    • Iliopoulos, A. S., N. Pitsianis, X. Sun, F. F. Yin, and L. Ren. “WE-AB-303-09: Rapid Projection Computations for On-Board Digital Tomosynthesis in Radiation Therapy.” In Med Phys, 42:3658, 2015. https://doi.org/10.1118/1.4925874.
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    • Mao, R., Y. Zhang, L. Ren, L. Tian, R. Gao, H. Ge, and F. Yin. “SU-E-T-293: Dosimetric Analysis of Microscopic Disease in SBRT for Lung Cancers.” In Med Phys, 42:3400, 2015. https://doi.org/10.1118/1.4924655.
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    • Zawisza, I., L. Ren, and F. Yin. “TH-AB-303-02: An Investigation of Respiratory Signal Parameters for Multiple-Step Ahead Prediction of Surrogate Motion.” In Med Phys, 42:3711, 2015. https://doi.org/10.1118/1.4926157.
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    • Zhang, L., Y. Zhang, W. Harris, F. Yin, and L. Ren. “SU-E-J-26: A Novel Technique for Markerless Self-Sorted 4D-CBCT Using Patient Motion Modeling: A Feasibility Study.” In Med Phys, 42:3269, 2015. https://doi.org/10.1118/1.4924113.
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    • Li, H., J. Bowsher, Y. Jiang, T. Pang, Q. Wu, S. Yan, B. Czito, C. Willett, and F. Yin. “Effects of PET Reconstruction Parameters on Region-of-Interest Contouring by SUV Threshold.” In International Journal of Radiation Oncology*Biology*Physics, 87:S340–S340. Elsevier BV, 2013. https://doi.org/10.1016/j.ijrobp.2013.06.895.
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    • Pang, T., L. Yuan, Y. Ge, Y. Jiang, S. Das, D. Yoo, F. Yin, and Q. Wu. “Quality Evaluation of an Automatic VMAT Planning Method for Head-and-Neck Cancer Cases.” In International Journal of Radiation Oncology*Biology*Physics, 87:S581–82. Elsevier BV, 2013. https://doi.org/10.1016/j.ijrobp.2013.06.1542.
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    • Liu, B., J. Adamson, A. Rodrigues, F. Zhou, F. Yin, and Q. Wu. “WE-G-108-08: A Novel Technique for VMAT QA with EPID in Cine Mode On Varian TrueBeam.” In Med Phys, 40:502, 2013. https://doi.org/10.1118/1.4815632.
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    • Ren, L., Y. Zhang, Y. Yang, J. Adamson, and F. Yin. “SU-E-T-196: Pretreatment Patient Clinical Objective IMRT Quality Assurance Using a 3D Diode Array.” In Med Phys, 40:249, 2013. https://doi.org/10.1118/1.4814631.
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    • Rodrigues, A., F. Yin, and Q. Wu. “SU-E-T-602: Dynamic Electron Arc Radiotherapy (DEAR): A Planning Study.” In Med Phys, 40:344, 2013. https://doi.org/10.1118/1.4815030.
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    • Turner, K., Y. Zhang, I. Vergalasova, L. Ren, P. Segars, C. Kelsey, D. Yoo, F. Yin, and J. Cai. “MO-F-WAB-11: Investigation of CBCT-Based Patient Positioning Accuracy in Lung SBRT: Correlation with Breathing Irregularity.” In Med Phys, 40:412, 2013. https://doi.org/10.1118/1.4815300.
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    • Wu, Q., Z. Chang, J. Adamson, L. Ren, and F. Yin. “SU-E-T-560: A Method to Determine Optimal Dynamic MLC Parameters for Varian Truebeam with Millennium MLC and HDMLC.” In Med Phys, 40:334, 2013. https://doi.org/10.1118/1.4814989.
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    • Zhang, Y., L. Ren, C. Ling, and F. Yin. “WE-A-134-04: Comprehensive Evaluation of a Respiration-Phase-Matched Digital Tomosynthesis (DTS) Imaging Technique for Monitoring Moving Targets.” In Med Phys, 40:469–70, 2013. https://doi.org/10.1118/1.4815510.
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    • Zhang, Y., P. Segars, F. Yin, and L. Ren. “TU-G-141-03: An On-Board 4D-CBCT Reconstruction Technique Using Limited-Angle Projections Based On Motion Modeling and Free-Form Deformation (MM-FD).” In Med Phys, 40:456, 2013. https://doi.org/10.1118/1.4815463.
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    • Bowsher, J., S. Yan, and F. Yin. “WE‐G‐500‐09: Robotic Multi‐Pinhole Scenarios for SPECT Molecular and Functional Imaging Onboard and in Other Applications.” In Medical Physics, 40:505, 2013. https://doi.org/10.1118/1.4815642.
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    • Chang, Z., F. Yin, S. Yoo, and J. Horton. “SU‐E‐CAMPUS‐J‐04: Evaluating Radiation‐Induced Changes with Diffusion Weighted MRI and Dynamic Contrast Enhanced MRI in Patients with Early Stage Breast Cancer Treated with Stereotactic Body Radiotherapy: Initial Results.” In Medical Physics, 40:378–79, 2013. https://doi.org/10.1118/1.4815176.
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    • Chang, Z., H. Yan, and F. Yin. “SU‐E‐J‐150: Investigation of Feasibility of Concurrent Orthogonal KV and MV X‐Ray Imaging for Tagrget Tracking During Dose Delivery for Stereotactic Body Radiotherapy (SBRT): A Pilot Phantom Study.” In Medical Physics, 40:185, 2013. https://doi.org/10.1118/1.4814362.
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    • Liu, Y., W. Miller, F. Yin, and J. Cai. “TU‐C‐141‐08: Evaluate Deformable Image Registration for the Lungs Using Hyperpolarized Gas Tagging MRI.” In Medical Physics, 40:435, 2013. https://doi.org/10.1118/1.4815385.
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    • Qin, Y., C. Kelsey, D. Yoo, F. Yin, and J. Cai. “SU‐E‐T‐474: Adaptive Stereotactic Body Radiation Therapy (SBRT) Planning for Lung Cancer: Can We Predict Who Will Benefit?” In Medical Physics, 40:314, 2013. https://doi.org/10.1118/1.4814907.
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    • Rankine, L., J. Bowsher, D. Brizel, F. Yin, and S. Das. “SU‐E‐J‐200: Impact of FDG‐PET/CT Reconstruction Parameters On PET Variability and Treatment Response Assessment.” In Medical Physics, 40:197, 2013. https://doi.org/10.1118/1.4814412.
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    • Yan, H., and F. Yin. “SU‐E‐J‐91: Developing Platform for Online Registration Using Digital Tomosynthesis.” In Medical Physics, 40:171, 2013. https://doi.org/10.1118/1.4814303.
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    • Chang, Z., J. Kirkpatrick, J. Cai, Z. Wang, and F. Yin. “Evaluating Radiation-Induced White Matter Changes in Patients with Recurrent Malignant Gliomas Under Treatment of Stereotactic Radiosurgery Using Diffusion Tensor Imaging.” In Medical Physics, 39:3937–3937, 2012. https://doi.org/10.1118/1.4736067.
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    • Chang, Z., Q. Wu, J. Adamson, L. Ren, J. Bowsher, H. Yan, A. Thomas, and F. Yin. “Assessing Effects of Ion Collection Efficiency in Flattening Filter-Free (FFF) Beams On Three TrueBeam Machines.” In Medical Physics, 39:3719–3719, 2012. https://doi.org/10.1118/1.4735130.
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    • Li, H., W. Giles, L. Ren, J. Bowsher, and F. Yin. “Dual-Energy CBCT Imaging for Metal Artifact Reduction and Contrast Enhancement.” In Medical Physics, 39:4017–4017, 2012. https://doi.org/10.1118/1.4736387.
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    • O’Daniel, J., L. Ren, H. Yan, and F. Yin. “A Protocol for Comprehensive Acceptance/Commissioning of Complex 3D QA Devices.” In Medical Physics, 39:3718–3718, 2012. https://doi.org/10.1118/1.4735126.
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    • Zhang, Y., L. Ren, I. Vergalasova, J. Cai, and F. Yin. “Phase-Matched Digital Tomosynthesis (DTS) Imaging for Simultaneous Target Verification During Volumetric Modulated Arc Therapy (VMAT) Treatment.” In Medical Physics, 39:3889–90, 2012. https://doi.org/10.1118/1.4735877.
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    • Ren, L., J. Jin, B. Movsas, F. Yin, and I. Chetty. “Dosimetric Evaluation and Optimization of a Novel CBCT Estimation Method for Adaptive Radiation Therapy (ART).” In International Journal of Radiation Oncology*Biology*Physics, 81:S821–S821. Elsevier BV, 2011. https://doi.org/10.1016/j.ijrobp.2011.06.1447.
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    • Cai, J., Z. Chang, J. O’daniel, S. Yoo, Y. Jian, H. ge, and F. Yin. “TU‐E‐BRC‐08: Investigation of Anatomical Surrogate for 4DCT Imaging.” In Medical Physics, 38:3771, 2011. https://doi.org/10.1118/1.3613195.
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    • Chang, Z., Q. Xiang, and F. Yin. “MO‐F‐211‐04: Fast Phase Contrast MR Angiography with Simplified Skipped Phase Encoding and Edge Deghosting with Array Coil Enhancement (S‐ SPEED‐ACE).” In Medical Physics, 38:3730, 2011. https://doi.org/10.1118/1.3613035.
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    • Chang, Z., T. Liu, J. Cai, Q. Chen, Z. Wang, and F. Yin. “SU‐E‐T‐123: Evaluation of Integrated Gating Systems on a Novalis Tx System Using Quantitative Motion Tracking Analyses and Efficient Time‐Delay Measurements.” In Medical Physics, 38:3514, 2011. https://doi.org/10.1118/1.3612074.
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    • Jian, Y., J. Cai, and F. Yin. “SU‐E‐I‐29: A Prior Information Based Total‐Variation Digital Tomosynthesis Reconstruction Algorithm.” In Medical Physics, 38:3402, 2011. https://doi.org/10.1118/1.3611602.
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    • Ren, L., J. Jin, B. Movsas, F. Yin, and I. Chetty. “MO‐D‐BRC‐01: Dosimetric Evaluation of a Novel Cone‐Beam CT (CBCT) Estimation Method Using Prior Information for Lung Cancer Patient Treatment.” In Medical Physics, 38:3712, 2011. https://doi.org/10.1118/1.3612965.
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    • Yan, H., and F. Yin. “SU‐E‐T‐860: Developing a Fast‐Monotonic Descent (FMD) Algorithm for RapidArc Radiotherapy.” In Medical Physics, 38:3689, 2011. https://doi.org/10.1118/1.3612824.
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    • Yin, F., A. Thomas, H. Yan, I. Vergalasova, J. Adamovics, Q. wu, and M. Oldham. “SU‐E‐T‐99: A Patient Specific QA Protocol for Verification of 4D Dosimetry.” In Medical Physics, 38:3508, 2011. https://doi.org/10.1118/1.3612050.
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    • Yuan, L., Y. ge, T. li, X. Zhu, F. Yin, and Q. wu. “SU‐E‐T‐854: Key Anatomical Factors Influencing OAR Dose‐Volume Distribution in Prostate IMRT Plans.” In Medical Physics, 38:3688, 2011. https://doi.org/10.1118/1.3612818.
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    • Yuan, L., Y. ge, T. li, X. Zhu, F. Yin, and Q. wu. “TH‐E‐BRB‐05: Modeling the Correlation Between OAR Dose Sparing and Patient's Anatomy in Head and Neck IMRT.” In Medical Physics, 38:3867, 2011. https://doi.org/10.1118/1.3613562.
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    • Zhang, F., J. hu, C. Kelsey, F. Yin, and J. Cai. “MO‐D‐BRB‐03: Investigation of the Reproducibility of Probability Distribution function (PDF) of Tumor Motion in Lung Stereotactic Body Radiation Therapy (SBRT).” In Medical Physics, 38:3709–10, 2011. https://doi.org/10.1118/1.3612908.
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    • Adamson, J., J. Kirkpatrick, and F. Yin. “SU‐GG‐T‐483: Does Breath‐Hold Immobilization Affect Tumor Radioresistance in Breast?” In Medical Physics, 37:3298, 2010. https://doi.org/10.1118/1.3468881.
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    • Chang, Z., J. Cai, Z. Wang, and F. Yin. “SU‐GG‐J‐67: Evaluating Dynamic Magnetic Resonance Imaging Using a New Design of Phantom: Validation with Fast Megavoltage Fluoroscopic Imaging.” In Medical Physics, 37:3160, 2010. https://doi.org/10.1118/1.3468291.
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    • Chang, Z., Q. Xiang, H. Shen, and F. Yin. “SU‐GG‐I‐144: Accelerating Non‐Contrast‐Enhanced MRA with Inflow Inversion Recovery by Using Skipped Phase Encoding and Edge Deghosting (SPEED).” In Medical Physics, 37:3134, 2010. https://doi.org/10.1118/1.3468179.
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    • Giles, W., J. Bowsher, and F. Yin. “TU‐A‐204B‐04: A Technique to Correct Crescent Artifacts in On‐Board CBCT.” In Medical Physics, 37:3370, 2010. https://doi.org/10.1118/1.3469171.
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    • Giles, W., J. Bowsher, and F. Yin. “SU‐GG‐J‐80: Characterization of Cross Scatter in Dual Source CBCT.” In Medical Physics, 37:3163, 2010. https://doi.org/10.1118/1.3468304.
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    • Jian, Y., D. Godfrey, Z. Chang, and F. Yin. “SU‐GG‐I‐24: Improving IGRT Efficiency Using GPU‐Based Ultrafast Reconstruction of DTS/CBCT and DRR.” In Medical Physics, 37:3106, 2010. https://doi.org/10.1118/1.3468057.
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    • Kim, S., H. Song, E. Samei, F. Yin, and T. Yoshizumi. “SU‐GG‐I‐14: A Method to Estimate Cone‐Beam CT Dose Index and Cone‐Beam Dose Length Product.” In Medical Physics, 37:3104, 2010. https://doi.org/10.1118/1.3468047.
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    • Kim, S., S. Yoo, F. Yin, E. Samei, and T. Yoshizumi. “SU‐GG‐I‐57: Dose and Image Quality Evaluation for Partial and Full‐Angle Kilovoltage Cone‐Beam CT Protocols.” In Medical Physics, 37:3114, 2010. https://doi.org/10.1118/1.3468090.
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    • Maurer, J., I. Vergalasova, T. Pan, and F. Yin. “SU‐GG‐J‐76: Validation of a Proposed Optimal Slow Gantry Rotation Technique for On‐Board Four‐Dimensional Imaging Using Lung Patient Data.” In Medical Physics, 37:3162, 2010. https://doi.org/10.1118/1.3468300.
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    • O’daniel, J., M. Kishore, S. Das, Q. J. wu, S. Yoo, and F. Yin. “SU‐GG‐T‐225: Gantry‐Angle Dependence of a 2D Ion Chamber Array for IMAT QA.” In Medical Physics, 37:3237, 2010. https://doi.org/10.1118/1.3468616.
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    • Song, H., M. Oldham, and F. Yin. “SU‐GG‐T‐362: Is Distance‐Dependent Energy Correction Needed for Dosimetric Measurements Surrounding Brachytherapy Sources?” In Medical Physics, 37:3269, 2010. https://doi.org/10.1118/1.3468759.
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    • Vergalasova, I., J. Maurer, and F. Yin. “SU‐DD‐A3‐03: How Accurately Can the Internal Target Volume (ITV) from a Free‐Breathing Cone Beam Computed Tomography (FB‐CBCT) Scan Be Used for Target Verification?” In Medical Physics, 37:3091, 2010. https://doi.org/10.1118/1.3467996.
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    • Wang, Z., J. Kirkpatrick, Z. Chang, J. Cai, T. Zhuang, and F. Yin. “SU‐GG‐T‐530: Comparison of Coplanar and Non‐Coplanar Intensity Modulated Arc Techniques for Treatment of Intracranial Multi‐Focal Stereotactic Radiosurgery.” In Medical Physics, 37:3309, 2010. https://doi.org/10.1118/1.3468927.
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    • Wang, Z., Z. Chang, Q. Chen, and F. Yin. “SU‐GG‐J‐62: Use Winston‐Lutz Test to Check Cone Beam CT Isocenter Accuracy for Imaging Guided Intracranial Stereotactic Radiosurgery.” In Medical Physics, 37:3159, 2010. https://doi.org/10.1118/1.3468286.
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    • Yan, H., B. Koontz, M. Kimura, Z. Vujaskovic, and F. Yin. “TH‐C‐204B‐07: Development of Image‐Guided Radiosurgery with Novalis TX for Small Animal Study.” In Medical Physics, 37:3456, 2010. https://doi.org/10.1118/1.3469500.
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    • Yin, F., J. Wong, and D. Jaffray. “TH‐A‐BRA‐03: TG‐104: In‐Room kV Imaging for IGRT.” In Medical Physics, 37:3446, 2010. https://doi.org/10.1118/1.3469462.
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    • Yoo, S., J. O’daniel, J. Horton, Q. wu, and F. Yin. “SU‐GG‐T‐583: Dosimetric Comparison of Anisotropic Analytical and Pencil Beam Convolution Algorithms in Breast Cancer Radiation Treatment Planning.” In Medical Physics, 37:3321, 2010. https://doi.org/10.1118/1.3468984.
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    • Yoo, S., S. Das, Q. wu, D. Brizel, and F. Yin. “SU‐GG‐T‐136: Treatment Plans Comparison with Static‐Gantry IMRT and RapidArcTM for Head‐And‐Neck Cancers Involving Cervical Lymph Nodes.” In Medical Physics, 37:3216, 2010. https://doi.org/10.1118/1.3468526.
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    • Zhu, X., D. Thongphiew, R. Mcmahon, T. li, V. Chankong, F. Yin, and Q. wu. “SU‐EE‐A1‐03: Arc Modulated Radiation Therapy Based on Linear Models.” In Medical Physics, 37:3094–95, 2010. https://doi.org/10.1118/1.3468008.
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    • li, T., D. Thongphiew, X. Zhu, F. Yin, and Q. wu. “WE‐B‐BRA‐03: Adaptive Image‐Guided Radiation Therapy (AIGRT) for Hypo‐Fractionated Prostate Cancer Treatment.” In Medical Physics, 37:3414–15, 2010. https://doi.org/10.1118/1.3469343.
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    • Chang, Z., Z. Wang, J. Ma, J. O’Daniel, J. Kirkpatrick, and F. Yin. “Six-dimensional Image Guidance for Spinal Noninvasive SRS/SBRT: Comparison between ExacTrac X-ray 6D with kV Cone-beam CT.” In International Journal of Radiation Oncology*Biology*Physics, 75:S125–26. Elsevier BV, 2009. https://doi.org/10.1016/j.ijrobp.2009.07.302.
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    • Chang, Z., S. Yoo, Z. Wang, and F. Yin. “SU‐GG‐J‐177: The Application of An ASi‐Based EPID to Guide Intensity Modulated Radiation Therapy (IMRT) of Head‐And‐Neck Cancer.” In Medical Physics, 35:2720, 2008. https://doi.org/10.1118/1.2961726.
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    • Chen, S., S. Zhou, J. Hubbs, T. Wong, S. Borges‐neto, F. Yin, L. Marks, and S. Das. “WE‐C‐AUD B‐05: Predicting Radiation‐Induced Cardiac Perfusion Defects Using a Fusion Model.” In Medical Physics, 35:2934, 2008. https://doi.org/10.1118/1.2962692.
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    • Das, S., L. Marks, and F. F. Yin. “MO‐D‐351‐07: A System to Dynamically Balance Dose Sparing Between Critical Structures in Intensity Modulated Radiation Therapy (IMRT).” In Medical Physics, 35:2868, 2008. https://doi.org/10.1118/1.2962358.
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    • Das, S., S. Chen, S. Zhou, F. Yin, J. Deasy, and L. Marks. “SU‐GG‐T‐406: Improving Lung Radiation‐Pneumonitis Prediction by Combining Different Models.” In Medical Physics, 35:2818, 2008. https://doi.org/10.1118/1.2962155.
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    • Luo, W., C. ma, F. Yin, and J. Fan. “SU‐GG‐T‐538: Dosimetric Effect of Energy Spread of Proton Beams.” In Medical Physics, 35:2848, 2008. https://doi.org/10.1118/1.2962287.
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    • Maurer, J., D. Godfrey, Z. Wang, and F. Yin. “TU‐EE‐A3‐03: On‐Board Four‐Dimensional Digital Tomosynthesis (4D‐DTS): Optimization of Respiratory Motion Dependent Acquisition and Reconstruction Parameters.” In Medical Physics, 35:2912–13, 2008. https://doi.org/10.1118/1.2962619.
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    • Ren, L., J. Zhang, D. Thongphiew, D. Godfrey, S. Zhou, and F. Yin. “TH‐D‐351‐02: A Novel Digital Tomosynthesis (DTS) Reconstruction Method Using Prior Information and a Deformation Model.” In Medical Physics, 35:2989, 2008. https://doi.org/10.1118/1.2962923.
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    • Roper, J., J. Bowsher, and F. Yin. “SU‐GG‐J‐156: Quantitative Analysis of Onboard SPECT Imaging Using Compact Gamma Cameras.” In Medical Physics, 35:2715, 2008. https://doi.org/10.1118/1.2961705.
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    • Song, H., J. Bowsher, and F. Yin. “SU‐GG‐T‐38: Tracking of Brachytherapy Source Position Using Emission Imaging.” In Medical Physics, 35:2734–35, 2008. https://doi.org/10.1118/1.2961788.
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    • Thongphiew, D., Q. wu, W. Lee, V. Chankong, and F. Yin. “SU‐GG‐T‐54: On‐Line Adaptive IMRT for Prostate Cancer.” In Medical Physics, 35:2738, 2008. https://doi.org/10.1118/1.2961804.
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    • Wang, Z., Q. wu, Z. Chang, J. Kirkpatrick, and F. Yin. “SU‐GG‐T‐454: Localization Accuracy of Cone‐Beam CT Guided Radiosurgery as Investigated Utilizing a Geometric Phantom.” In Medical Physics, 35:2829, 2008. https://doi.org/10.1118/1.2962202.
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    • Wang, Z., Z. Chang, Q. wu, S. Zhou, C. Huntzinger, and F. Yin. “SU‐GG‐T‐446: Dosimetric Characteristics of High Definition Multi‐Leaf Collimator.” In Medical Physics, 35:2827, 2008. https://doi.org/10.1118/1.2962194.
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    • Yan, H., L. Ren, D. Godfrey, S. Yoo, and F. Yin. “SU‐GG‐J‐119: Localization Accuracy of Target Verification System Using Digitial Tomosynthesis (DTS).” In Medical Physics, 35:2706, 2008. https://doi.org/10.1118/1.2961668.
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    • Yin, F., M. Roach, H. Shirato, and J. Balter. “MO‐D‐AUD C‐01: Targeting Using Surrogates.” In Medical Physics, 35:2866–67, 2008. https://doi.org/10.1118/1.2962351.
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    • Yoo, S., Q. wu, D. Godfrey, L. Ren, and F. Yin. “SU‐GG‐I‐52: Conversion of On‐Board Digital TomoSynthesis (DTS) to HU Values.” In Medical Physics, 35:2654, 2008. https://doi.org/10.1118/1.2961450.
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    • Yoo, S., Q. wu, and F. Yin. “SU‐GG‐J‐47: Clinical Implementation of An Integrated System for Image‐Guided Radiation Therapy (IGRT) and Adaptive Radiation Therapy (ART).” In Medical Physics, 35:2689, 2008. https://doi.org/10.1118/1.2961605.
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    • Zatwarnicki, C., Z. Wang, and F. Yin. “SU‐GG‐J‐183: The Use of Video Feedback for the Improvement of Respiratory Gating Radiation Treatments.” In Medical Physics, 35:2721–22, 2008. https://doi.org/10.1118/1.2961732.
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    • Zhang, J., L. Ren, S. Zhou, and F. Yin. “SU‐GG‐I‐47: A New Limited‐Angle CT Reconstruction Method Based On Total‐Variation Minimization.” In Medical Physics, 35:2653, 2008. https://doi.org/10.1118/1.2961445.
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    • Zhang, J., S. Yoo, S. Kim, and F. Yin. “SU‐GG‐T‐255: Experimental Verification of Lung Tumor Dose with Radiochromic Film.” In Medical Physics, 35:2783–84, 2008. https://doi.org/10.1118/1.2962007.
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    • Zhou, S., S. Das, F. Yin, S. Yoo, W. Lee, H. Yan, Q. Wu, Z. Wang, and L. Marks. “SU‐GG‐J‐81: Efficacy of Patient Setup Correction Procedure in Prostate Radiotherapy.” In Medical Physics, 35:2697, 2008. https://doi.org/10.1118/1.2961631.
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    • ma, J., Q. wu, D. Godfrey, H. Yan, L. Ren, and F. Yin. “SU‐GG‐I‐53: The Impact of Scan Angles On the Visibility of Anatomy in On‐Board Digital Tomosynthesis (DTS) Images for Head and Neck Cancer Patients: A Single‐Observer Study.” In Medical Physics, 35:2654, 2008. https://doi.org/10.1118/1.2961451.
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    • wu, Q., Z. Wang, D. Thongphiew, F. Yin, and W. Lee. “SU‐GG‐T‐13: Fast Seed Localization On MR Images For Post‐Prostate Implant Dosimetry.” In Medical Physics, 35:2729, 2008. https://doi.org/10.1118/1.2961763.
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    • Chang, Z., O. Craciunescu, and F. Yin. “SU‐EE‐A4‐04: Accelerating Breast Dynamic Contrast Enhanced MRI with Efficient Multiple Acquisitions by SPEED Using Shared Information.” In Medical Physics, 35:2642, 2008. https://doi.org/10.1118/1.2961395.
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    • Wang, Z., F. -. F. Yin, J. Maurer, Q. J. Wu, J. Hubbs, and L. B. Marks. “Intra-fraction motion during tangential treatment of the left breast: how consistently is the heart actually blocked?” In Breast Cancer Research and Treatment, 106:S194–S194. SPRINGER, 2007.
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    • Chen, S., S. Zhou, F. Yin, L. B. Marks, and S. K. Das. “Investigation of a Support Vector Model to Predict Lung Radiotherapy (RT) Induced Pneumonitis (RP).” In International Journal of Radiation Oncology*Biology*Physics, 69:S71–S71. Elsevier BV, 2007. https://doi.org/10.1016/j.ijrobp.2007.07.129.
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    • McGuire, S. M., S. Zhou, L. B. Marks, F. Yin, and S. K. Das. “Optimal Beam Selection to Enhance SPECT-Guided Reduction of IMRT Dose to Functioning Lung.” In International Journal of Radiation Oncology*Biology*Physics, 69:S157–58. Elsevier BV, 2007. https://doi.org/10.1016/j.ijrobp.2007.07.285.
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    • Bowsher, J., F. Yin, A. Chawla, K. Greer, H. Song, E. Samei, and C. Willett. “TH‐D‐M100F‐01: An Evaluation of Noise in Radiotracer Emission Imaging Using Flat‐Panel Detectors.” In Medical Physics, 34:2636, 2007. https://doi.org/10.1118/1.2761701.
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    • Das, S., S. Zhou, F. Yin, J. Zhang, and L. Marks. “SU‐FF‐T‐88: Augmenting Lyman NTCP by Adding the Influence of Non‐Dose Variables Via Decision Trees: Application to Lung Radiation‐Pneumonitis Prediction.” In Medical Physics, 34:2421, 2007. https://doi.org/10.1118/1.2760741.
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    • Fuller, J., Q. wu, D. Godfrey, J. Zhang, Z. Wang, S. Yoo, and F. Yin. “SU‐FF‐J‐58: Clinical Evaluation Using Digital Tomosynthesis for Positioning Verification of Breath‐Hold Liver Treatment.” In Medical Physics, 34:2381, 2007. https://doi.org/10.1118/1.2760563.
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    • Kim, S., T. Yoshizumi, and F. Yin. “SU‐FF‐T‐246: Implementation of Helical CT Source in DOSXYZnrc/EGSnrc Monte Carlo Code.” In Medical Physics, 34:2458, 2007. https://doi.org/10.1118/1.2760907.
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    • Luo, W., C. ma, F. Yin, and J. Fan. “SU‐FF‐T‐148: Developing a Convenient and Effective IMRT QA Procedure Using MLC Dynalog Files.” In Medical Physics, 34:2435, 2007. https://doi.org/10.1118/1.2760807.
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    • Luo, W., F. Yin, C. ma, J. Fan, and H. Song. “SU‐FF‐T‐172: Dosimetric Comparison of MapCheck with Monte Carlo Simulations.” In Medical Physics, 34:2440, 2007. https://doi.org/10.1118/1.2760831.
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    • Maurer, J., H. Yan, Z. Wang, and F. Yin. “TU‐FF‐A3‐05: Real‐Time Lung Tumor Motion Prediction Using Neural Network Based Models Constructed From Unsorted Cine CT Images.” In Medical Physics, 34:2573, 2007. https://doi.org/10.1118/1.2761447.
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    • Mcguire, S., S. Zhou, L. Marks, M. Dewhirst, F. Yin, and S. Das. “TH‐E‐M100E‐03: Optimizing the Methodology for Incorporating SPECT‐Guidance to Reduce Intensity Modulated Radiation Therapy (IMRT) Dose to Functioning Lung.” In Medical Physics, 34:2654, 2007. https://doi.org/10.1118/1.2761773.
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    • Song, H., D. Roa, M. Ahmad, W. Luo, F. Yin, and Z. Chen. “SU‐FF‐T‐438: Using Diode Dosimeters to Characterize Dose in the Buildup Region of High‐Energy Photon Beams.” In Medical Physics, 34:2502, 2007. https://doi.org/10.1118/1.2761163.
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    • Song, H., Z. Chen, N. Yue, Q. J. wu, and F. Yin. “SU‐FF‐T‐326: On the Use of Ice as a Water‐Equivalent Solid Medium for Brachytherapy Dosimetry Measurement.” In Medical Physics, 34:2476, 2007. https://doi.org/10.1118/1.2760989.
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    • Stakhursky, V., S. Das, S. Yoo, F. Yin, S. Kim, and B. Koontz. “SU‐FF‐J‐81: Estimation of Dose Variations During Prostate Radiation Treatment Due to Elastic Deformations of Soft Tissues.” In Medical Physics, 34:2386–87, 2007. https://doi.org/10.1118/1.2760586.
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    • Stieler, F., H. Yan, and F. Yin. “SU‐FF‐T‐377: Self‐Learning AI Technique for Parameter Optimization of IMRT Treatment Planning.” In Medical Physics, 34:2488, 2007. https://doi.org/10.1118/1.2761102.
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    • Thengphiew, D., Q. Wu, Z. Wang, S. Yoo, W. R. Lee, Z. Vujaskovic, and F. Yin. “On-line adaptive planning system for prostate IMRT treatment.” In International Journal of Radiation Oncology Biology Physics, 69:S20–21. ELSEVIER SCIENCE INC, 2007.
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    • Thongphiew, D., Q. wu, V. Chankong, H. Song, and F. Yin. “SU‐FF‐T‐14: A High MU Efficiency Dynamic MLC Leaf Sequencing Algorithm.” In Medical Physics, 34:2404, 2007. https://doi.org/10.1118/1.2760659.
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    • Thongphiew, D., Q. wu, V. Chankong, Z. Wang, and F. Yin. “SU‐DD‐A3‐04: On‐Line Re‐Optimization of Prostate IMRT Plans for Image Guided Adaptive Radiation Therapy.” In Medical Physics, 34:2328, 2007. https://doi.org/10.1118/1.2760335.
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    • Wang, Z., F. Yin, B. Czito, Q. J. wu, S. Zhou, and C. Willett. “TH‐E‐M100F‐07: Amplitude Gated Breath‐Hold Treatment for Upper Abdominal Lesions with On Board Imaging Guidance.” In Medical Physics, 34:2649, 2007. https://doi.org/10.1118/1.2761753.
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    • Wang, Z., J. Nelson, S. Yoo, Q. J. wu, J. Kirkpatrick, N. Larrier, J. Meyer, C. Willett, and F. Yin. “SU‐FF‐T‐252: Improvement of Localization Accuracy by Using 3D Cone Beam CT for Stereotactic Body Radiation Therapy of Liver, Lung and Spine Lesions.” In Medical Physics, 34:2459, 2007. https://doi.org/10.1118/1.2760913.
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    • Wang, Z., Q. J. wu, W. R. Lee, and F. Yin. “SU‐FF‐J‐48: Three‐Dimensional MRI and Cone‐Beam CT Matching for Localization of Prostate Cancer Treatment.” In Medical Physics, 34:2379, 2007. https://doi.org/10.1118/1.2760553.
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    • Yin, F., S. Yoo, and Q. wu. “TU‐EE‐A3‐03: Performing Concurrent Kilovoltage Imaging While Delivering Megavoltage Treatment Beams.” In Medical Physics, 34:2564–65, 2007. https://doi.org/10.1118/1.2761412.
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    • Yoo, S., G. Kim, R. Hammoud, E. Elder, T. Pawlicki, H. Guan, T. Fox, G. Luxton, F. Yin, and P. Munro. “A quality assurance program for the on-board imager®.” In Ifmbe Proceedings, 14:1793–96, 2007. https://doi.org/10.1007/978-3-540-36841-0_444.
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    • Yoo, S., S. Das, S. Kim, B. Koontz, W. Lee, K. Light, and F. Yin. “SU‐FF‐J‐68: Dosimetric Comparison of Patient‐Specific Margins Vs. Uniform Margins for Prostate IMRT Treatments.” In Medical Physics, 34:2383–84, 2007. https://doi.org/10.1118/1.2760573.
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    • Yoo, S., and F. Yin. “Feasibility of cone-beam CT based treatment planning.” In Ifmbe Proceedings, 14:1831–34, 2007. https://doi.org/10.1007/978-3-540-36841-0_454.
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    • Zhang, J., Q. wu, D. Godfrey, and F. Yin. “WE‐E‐M100F‐01: 3D Interfraction Position Verification for Patients Undergoing Partial Breast Irradiation: Comparing Digital Tomosynthesis to Cone‐Beam CT.” In Medical Physics, 34:2607, 2007. https://doi.org/10.1118/1.2761583.
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    • Zhang, L., H. Yan, and F. Yin. “SU‐FF‐J‐57: A Phantom Study On the 3‐D Target Localization Accuracy Using CBCT of An On‐Board Imager.” In Medical Physics, 34:2381, 2007. https://doi.org/10.1118/1.2760562.
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    • wu, Q., D. Thongphiew, Z. Wang, and F. Yin. “TH‐D‐AUD‐07: The Impact of SBRT Treatment Techniques On Dose Delivery in Presence of Organ Motion and Deformation.” In Medical Physics, 34:2642, 2007. https://doi.org/10.1118/1.2761726.
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    • Mbibi, O., O. Craciunescu, T. Fatunase, L. Marks, and F. Yin. “SU‐FF‐J‐105: Predicting Late Skin Effects Using Digital Infrared Imaging for Breast Cancer Patients Treated with Radiation.” In Medical Physics, 34:2392, 2007. https://doi.org/10.1118/1.2760610.
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    • You, D. S., Z. Wang, J. Nelson, J. Kirkpatrick, S. Yoo, J. Wu, J. Meyer, N. Larrier, L. Marks, and F. Yin. “Improved target localization with 3D cone beam CT On-Board Imaging in stereotactic body radiation therapy.” In International Journal of Radiation Oncology Biology Physics, 69:S21–22, 2007.
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    • Blessing, M., D. Godfrey, F. Lohr, and F. Yin. “TH‐C‐330A‐05: Analysis of the Point Spread Function of Isocentric Digital Tomosynthesis (DTS).” In Medical Physics, 33:2266, 2006. https://doi.org/10.1118/1.2241847.
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    • Bowsher, J., F. Yin, K. Greer, R. Jaszczak, E. Samei, and C. Willett. “TU‐FF‐A3‐02: Preliminary Investigations Into Combined CT/SPECT Imaging Onboard Therapy Machines.” In Medical Physics, 33:2221, 2006. https://doi.org/10.1118/1.2241651.
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    • Das, S., and F. Yin. “SU‐FF‐T‐208: Efficient Selection of Beam Number and Orientations for Intensity Modulated Radiotherapy (IMRT) by Emulating An Ideal Dose Distribution.” In Medical Physics, 33:2096, 2006. https://doi.org/10.1118/1.2241130.
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    • Fatunase, T., Z. Wang, S. Yoo, F. Yin, and L. Marks. “SU‐FF‐I‐17: Reduction of Set‐Up Error Using Cone Beam‐CT in Patients Undergoing Partial Breast Irradiation.” In Medical Physics, 33:2000, 2006. https://doi.org/10.1118/1.2240255.
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    • Godfrey, D., L. Ren, H. Yan, M. Oldham, and F. Yin. “TH‐C‐ValB‐04: Evaluation of the Quality of 3D‐3D Mutual Information (MI) Shared Between Reference and On‐Board DTS Images.” In Medical Physics, 33:2268, 2006. https://doi.org/10.1118/1.2241855.
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    • Goss, M., P. Guo, F. Yin, and M. Oldham. “SU‐FF‐T‐219: Evaluation of a Practical and Low Cost Gafchromic Film/flat‐Bed Scanner Combination for Planar Dosimetry.” In Medical Physics, 33:2098, 2006. https://doi.org/10.1118/1.2241139.
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    • Hanna, G., Z. Wang, and F. Yin. “SU‐FF‐T‐432: Time‐Delay Measurement of a Varian Real‐Time Position Management System.” In Medical Physics, 33:2145, 2006. https://doi.org/10.1118/1.2241352.
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    • Kim, S., S. Yoo, B. Koonts, S. Das, M. Anscher, and F. Yin. “WE‐E‐ValA‐03: Dosimetric Evaluation of Prostate IMRT Treatments Positioned Based On Cone‐Beam CT.” In Medical Physics, 33:2254, 2006. https://doi.org/10.1118/1.2241800.
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    • Mcguire, S., S. Zhou, L. Marks, M. Dewhirst, F. Yin, and S. Das. “TH‐C‐224C‐09: Using SPECT‐Guidance to Reduce Intensity Modulated Radiation Therapy (IMRT) Dose to Functioning Lung.” In Medical Physics, 33:2275, 2006. https://doi.org/10.1118/1.2241882.
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    • Song, H., Q. wu, B. Steffey, and F. Yin. “SU‐FF‐T‐151: Conservation of Integrated Reference Air Kerma.” In Medical Physics, 33:2083, 2006. https://doi.org/10.1118/1.2241075.
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    • Wang, Z., F. Yin, L. Marks, Q. Wu, S. Yoo, and C. Willett. “SU‐FF‐J‐86: Intra‐ and Inter‐Breath‐Hold Position Variations for OBI Guided Amplitude Gating Treatment with Breath Hold.” In Medical Physics, 33:2040, 2006. https://doi.org/10.1118/1.2240863.
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    • Wang, Z., F. Yin, S. Yoo, Q. wu, C. Willett, and L. Marks. “SU‐EE‐A1‐04: Verifying Internal Target Volume Using Cone‐Beam CT for Stereotactic Body Radiotherapy Treatment.” In Medical Physics, 33:1991, 2006. https://doi.org/10.1118/1.2240160.
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    • Wu, Q., H. Yan, F. Yin, S. Yoo, S. Das, and C. Willett. “SU‐FF‐J‐16: A Tool for Off‐Line Review of 3D Target Verification and Localization with Cone‐Beam Computed Tomography.” In Medical Physics, 33:2023, 2006. https://doi.org/10.1118/1.2240795.
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    • Yan, H., D. Godfrey, and F. Yin. “SU‐FF‐J‐118: Respiration Phase‐Based Cone‐Beam Computed Tomography (CBCT) Reconstruction.” In Medical Physics, 33:2047, 2006. https://doi.org/10.1118/1.2240894.
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    • Yan, H., F. Yin, S. Zhou, L. Marks, and C. Willett. “SU‐FF‐J‐96: Modeling Correlation Between External Surface Motion and Internal Organ Motion Based On 4DCT.” In Medical Physics, 33:2042, 2006. https://doi.org/10.1118/1.2240872.
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    • Yin, F., L. Marks, Z. Wang, J. Kirkpatrick, J. Wu, S. Yoo, N. Larrier, J. Meyer, and C. Willett. “SU‐FF‐T‐66: A Technique for Cone‐Beam CT‐Guided Stereotactic Body Radiation Therapy.” In Medical Physics, 33:2063, 2006. https://doi.org/10.1118/1.2240992.
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    • Yin, F., S. Yoo, Z. Wang, D. Godfrey, and Q. wu. “MO‐A‐224C‐01: Daily Localization I: KV/CBCT.” In Medical Physics, 33:2155, 2006. https://doi.org/10.1118/1.2241392.
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    • Yoo, S., G. Kim, R. Hammoud, E. Elder, T. Pawlicki, H. Guan, T. Fox, G. Luxton, F. Yin, and P. Munro. “SU‐FF‐T‐374: Quality Assurance of the On‐Board Imager and Cone‐Beam Computed Tomography Systems.” In Medical Physics, 33:2131–32, 2006. https://doi.org/10.1118/1.2241291.
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    • Yoo, S., and F. Yin. “TU‐FF‐A2‐01: Feasibility of Cone‐Beam CT Based Treatment Planning.” In Medical Physics, 33:2219, 2006. https://doi.org/10.1118/1.2241644.
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    • Zhang, J., D. Godfrey, and F. Yin. “SU‐FF‐I‐19: A Study of Megavoltage Beam Tomosynthesis.” In Medical Physics, 33:2001, 2006. https://doi.org/10.1118/1.2240258.
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    • Zhang, J., and F. Yin. “SU‐FF‐I‐09: Minimizing Scatter Artifact in Cone‐Beam CT Reconstruction Using Both Kilovoltage and Megavoltage Beams.” In Medical Physics, 33:1998, 2006. https://doi.org/10.1118/1.2240247.
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    • Zhou, S., H. Yan, Z. Wang, S. Yoo, S. Das, F. Yin, M. Anscher, and L. Marks. “SU‐FF‐J‐22: An Image Based Statistical Shape Model and Its Application in Radiotherapy Margin Design.” In Medical Physics, 33:2025, 2006. https://doi.org/10.1118/1.2240801.
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    • hu, A., H. Song, Z. Chen, S. Zhou, and F. Yin. “SU‐FF‐T‐221: Evaluation of An Electron Monte Carlo Dose Calculation Algorithm for Electron Beam Radiotherapy.” In Medical Physics, 33:2099, 2006. https://doi.org/10.1118/1.2241141.
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    • Godfrey, D., L. Ren, H. Yan, M. Oldham, and F. Yin. “Evaluation of the quality of 3D-3D mutual information (MI) shared between reference and on-board DTS images.” In Medical Physics, 33:2268–2268, 2006. https://doi.org/10.1118/1.2241856.
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    • Mbibi, O., O. Craciunescu, T. Fatunase, L. Marks, and F. Yin. “SU‐DD‐A4‐01: Quantifying Skin Effects After Accelerated Partial Breast Irradiation Using Digital Infrared Imaging (DII): Preliminary Feasibility Data.” In Medical Physics, 33:1989, 2006. https://doi.org/10.1118/1.2240149.
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    • Das, S. K., S. Zhou, Z. Kocak, F. Yin, and L. Marks. “Improved Prediction of Radiation Pneumonitis using Multiple Additive Regression Trees.” In International Journal of Radiation Oncology*Biology*Physics, 63:S228–29. Elsevier BV, 2005. https://doi.org/10.1016/j.ijrobp.2005.07.390.
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    • Godfrey, D. J., M. Oldham, J. T. Dobbins, and F. Yin. “Online Digital Tomosynthesis (DTS): A Novel Technique for Improving Target Localization in Radiation Therapy.” In International Journal of Radiation Oncology*Biology*Physics, 63:S556–S556. Elsevier BV, 2005. https://doi.org/10.1016/j.ijrobp.2005.07.937.
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    • Wang, Z., F. Yin, S. Yoo, H. Yan, K. Livengood, and L. Marks. “Heart Dose Reduction for Radiation Treatments of Left-Sided Breast Cancer by Using 4D Simulation and 4D Verification.” In International Journal of Radiation Oncology*Biology*Physics, 63:S203–4. Elsevier BV, 2005. https://doi.org/10.1016/j.ijrobp.2005.07.351.
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    • Yan, H., S. Zhou, F. Yin, and C. Willett. “The Evaluation of Knowledge based Artificial Intelligence Application on Parameter Optimization of Inverse Planning System.” In International Journal of Radiation Oncology*Biology*Physics, 63:S529–S529. Elsevier BV, 2005. https://doi.org/10.1016/j.ijrobp.2005.07.893.
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    • Zhou, S., S. Das, Z. Wang, H. Yan, F. Yin, and L. Marks. “Extrapolating Organ Motion Margin for Radiation Fields from Sequential Patient Images.” In International Journal of Radiation Oncology*Biology*Physics, 63:S545–S545. Elsevier BV, 2005. https://doi.org/10.1016/j.ijrobp.2005.07.918.
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    • Godfrey, D., M. Oldham, J. Dobbins, and F. Yin. “SU‐FF‐J‐57: Digital Tomosynthesis for Verification of Radiation Therapy Positioning: Preliminary Results From a Kilovoltage On‐Board Imaging System.” In Medical Physics, 32:1932, 2005. https://doi.org/10.1118/1.1997603.
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    • Guan, H., H. Yan, F. Yin, J. Kim, P. Keall, S. Vedam, and B. Movsas. “SU‐FF‐J‐70: Respiratory Gated Radiation Therapy Directly Using Patient's Fluoroscopic Images Instead of External Or Internal Markers.” In Medical Physics, 32:1936, 2005. https://doi.org/10.1118/1.1997616.
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    • Hammoud, R., F. Yin, S. Yoo, H. Guan, D. Pradhan, M. Ajlouni, and B. Movsas. “SU‐FF‐J‐80: Clinical Procedures for Daily Patient Setup Verification Using On‐Board Imager (OBI).” In Medical Physics, 32:1938, 2005. https://doi.org/10.1118/1.1997626.
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    • Wang, Z., F. Yin, T. Raidy, K. Kelly, M. Oldham, S. Das, S. Zhou, L. Marks, M. Kasibhatla, and C. Willett. “SU‐FF‐J‐30: Quantification of Normal Organ Motion Due to the Respiratory and Cardiac Cycles.” In Medical Physics, 32:1926, 2005. https://doi.org/10.1118/1.1997576.
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    • Wang, Z., H. Yuan, C. Willett, M. Dewhirst, and F. Yin. “SU‐EE‐A4‐04: Compartment Modeling Analysis of Cu‐ATSM Dynamic PET Images.” In Medical Physics, 32:1901, 2005. https://doi.org/10.1118/1.1997468.
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    • Yoo, S., F. Yin, M. Ajlouni, and B. Movsas. “SU‐FF‐T‐186: Commissioning of Tissue Inhomogeneity Correction of Eclipse Radiation Treatment Planning System Using a Lung Phantom.” In Medical Physics, 32:1992, 2005. https://doi.org/10.1118/1.1997867.
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    • Yin, F. F., W. Lai, C. W. Chen, D. F. Nelson, M. C. Schell, and P. Rubin. “Development of a computerized portal verification system for radiation therapy of breast cancers.” In Proceedings of Spie  the International Society for Optical Engineering, 2434:540–45, 1995. https://doi.org/10.1117/12.208725.
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    • Nishikawa, R. M., M. L. Giger, K. Doi, C. J. Vyborny, R. A. Schmidt, C. E. Metz, Y. Wu, et al. “Computer-aided detection and diagnosis of masses and clustered microcalcifications from digital mammograms.” In Proceedings of Spie  the International Society for Optical Engineering, 1905:422–32, 1993. https://doi.org/10.1117/12.148655.
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    • Giger, M. L., F. F. Yin, K. Doi, Y. Wu, C. J. Vyborny, R. A. Schmidt, and Z. Huo. “Computerized detection and characterization of mass lesions in digital mammography.” In Conference Proceedings  Ieee International Conference on Systems, Man and Cybernetics, 1992-January:1370–72, 1992. https://doi.org/10.1109/ICSMC.1992.271594.
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