Feng Gao | Scholars@Duke

Feng Gao
Professor of Medicine

Dr. Feng Gao is Professor of Medicine at Duke University. The Gao laboratory has a long-standing interest in elucidating the origins and evolution of human and simian inmmunodeficiency viruses (HIV and SIV), and in studying HIV/SIV gene function and pathogenic mechanisms from the evolutionary perspective. These studies have led to new strategies to better understand HIV origins, biology, pathogenesis and drug resistance, and to design new AIDS vaccines.

Current Appointments & Affiliations

Professor of Medicine, Medicine, Infectious Diseases, Medicine 2016
Member of the Duke Human Vaccine Institute, Duke Human Vaccine Institute, Institutes and Centers 2005

Contact Information

244 Sands Bldg, Box 102359, Durham, NC 27710
Box 102359 Med Ctr, Durham, NC 27710
feng.gao@duke.edu (919) 668-6433

Background
Education, Training, & Certifications
- M.D., Harbin Medical University (China) 1984
Duke Appointment History
- Professor of Medicine, Medicine, Duke Human Vaccine Institute, Medicine 2009 - 2016
- Associate Professor of Medicine, Duke Human Vaccine Institute, Institutes and Centers 2006 - 2009
- Associate Research Professor of Medicine, Duke Human Vaccine Institute, Institutes and Centers 2002 - 2006
- Associate Research Professor of Medicine, Medicine, Rheumatology and Immunology, Medicine 2001 - 2002
Expertise
Global Scholarship
- Research
Research
Selected Grants
- Nonhuman Primate Core Virology Laboratory for AIDS Vaccine Research and Development - Base awarded by National Institutes of Health 2017 - 2024
- Nonhuman Primate Core Virology Laboratory for AIDS Vaccine Research and Development - Option 7-13 awarded by National Institutes of Health 2017 - 2024
- EQAPOL - Years 2017 to 2024 - BASE awarded by National Institutes of Health 2017 - 2024
- Dissection of polyreactivity and neutralization activity of HIV-1 Abs awarded by National Institutes of Health 2016 - 2021
- Interdisciplinary Research Training Program in AIDS awarded by National Institutes of Health 2010 - 2020
- The Genitourinary Tract as a compartment and reservoir for HIV awarded by National Institutes of Health 2015 - 2020
- Innate antiviral factors in breast milk and the oral HIV-1 reservoir awarded by National Institutes of Health 2015 - 2020
- Role of neutralizing antibodies in HIV-1-infected and vaccinated mothers in MTCT awarded by National Institutes of Health 2016 - 2020
- Nonhuman Primate Core Virology Laboratory for AIDS Vaccine Research and Development - Option 1 Year 2 awarded by National Institutes of Health 2017 - 2019
- Eqapol Opt 1 -2018-2019 awarded by National Institutes of Health 2017 - 2019
- Broad neutralizing antibodies against HIV-1 from RV217 participants awarded by Henry M. Jackson Foundation 2014 - 2018
- EQAPOL - 2016 to 2017 - Option 6 - VIRUS awarded by National Institutes of Health 2010 - 2017
- EQAPOL Option 5 awarded by National Institutes of Health 2010 - 2017
- Invitro Function of DART Molecules (Base) awarded by MacroGenics, Inc. 2016 - 2017
- Critical domains for HIV-1 entry through atypical coreceptor usage awarded by National Institutes of Health 2013 - 2016
- A Magnetic Microparticle Kit for Cell Removal from Blood awarded by Luna Innovations Inc. 2015 - 2016
- Role of Virus Recombination in Multiple Drug Resistance awarded by National Institutes of Health 2003 - 2008
- A Universal Env Immunogen for all HIV-1 Subtypes awarded by National Institutes of Health 2003 - 2006
- NCRR FACSAria Cell Sorter awarded by National Center for Research Resources 2004 - 2006
- Immunogenicity of an HIV virus-like particle vaccine awarded by National Institutes of Health 2003 - 2006
Publications & Artistic Works
Selected Publications
- Academic Articles
  - Chen, Y, Hora, B, DeMarco, T, Berba, R, Register, H, Hood, S, Carter, M, Stone, M, Pappas, A, Sanchez, AM, Busch, M, Denny, TN, and Gao, F. "Increased predominance of HIV-1 CRF01_AE and its recombinants in the Philippines." The Journal of General Virology 100, no. 3 (March 2019): 511-522. Full Text Open Access Copy
  - Peng, BJ, Carlson, JM, Liu, MKP, Gao, F, Goonetilleke, N, McMichael, AJ, Borrow, P, Gilmour, J, Heath, SL, Hunter, E, Bansal, A, and Goepfert, PA. "Antisense-Derived HIV-1 Cryptic Epitopes Are Not Major Drivers of Viral Evolution during the Acute Phase of Infection." Journal of Virology 92, no. 19 (October 2018). Full Text
  - Wagh, K, Kreider, EF, Li, Y, Barbian, HJ, Learn, GH, Giorgi, E, Hraber, PT, Decker, TG, Smith, AG, Gondim, MV, Gillis, L, Wandzilak, J, Chuang, G-Y, Rawi, R, Cai, F, Pellegrino, P, Williams, I, Overbaugh, J, Gao, F, Kwong, PD, Haynes, BF, Shaw, GM, Borrow, P, Seaman, MS, Hahn, BH, and Korber, B. "Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth." Cell Reports 25, no. 4 (October 2018): 893-908.e7. Full Text
  - Shi, W, Kou, Y, Xiao, J, Zhang, L, Gao, F, Kong, W, Su, W, Jiang, C, and Zhang, Y. "Comparison of immunogenicity, efficacy and transcriptome changes of inactivated rabies virus vaccine with different adjuvants." Vaccine 36, no. 33 (August 2018): 5020-5029. Full Text
  - Dai, W, Wu, Y, Bi, J, Wang, J, Wang, S, Kong, W, Barbier, J, Cintrat, J-C, Gao, F, Jiang, Z, Gillet, D, Su, W, and Jiang, C. "Antiviral Effect of Retro-2.1 against Herpes Simplex Virus Type 2 In Vitro." Journal of Microbiology and Biotechnology 28, no. 6 (June 2018): 849-859. Full Text
  - Kou, Y, Wan, M, Shi, W, Liu, J, Zhao, Z, Xu, Y, Wei, W, Sun, B, Gao, F, Cai, L, and Jiang, C. "Performance of Homologous and Heterologous Prime-Boost Immunization Regimens of Recombinant Adenovirus and Modified Vaccinia Virus Ankara Expressing an Ag85B-TB10.4 Fusion Protein against Mycobacterium tuberculosis." Journal of Microbiology and Biotechnology 28, no. 6 (June 2018): 1022-1029. Full Text
  - Shi, W, Kou, Y, Jiang, H, Gao, F, Kong, W, Su, W, Xu, F, and Jiang, C. "Novel intranasal pertussis vaccine based on bacterium-like particles as a mucosal adjuvant." Immunology Letters 198 (June 2018): 26-32. Full Text
  - Song, H, Giorgi, EE, Ganusov, VV, Cai, F, Athreya, G, Yoon, H, Carja, O, Hora, B, Hraber, P, Romero-Severson, E, Jiang, C, Li, X, Wang, S, Li, H, Salazar-Gonzalez, JF, Salazar, MG, Goonetilleke, N, Keele, BF, Montefiori, DC, Cohen, MS, Shaw, GM, Hahn, BH, McMichael, AJ, Haynes, BF, Korber, B, Bhattacharya, T, and Gao, F. "Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection." Nature Communications 9, no. 1 (May 15, 2018): 1928-null. Full Text
  - Kumar, A, Smith, CEP, Giorgi, EE, Eudailey, J, Martinez, DR, Yusim, K, Douglas, AO, Stamper, L, McGuire, E, LaBranche, CC, Montefiori, DC, Fouda, GG, Gao, F, and Permar, SR. "Infant transmitted/founder HIV-1 viruses from peripartum transmission are neutralization resistant to paired maternal plasma." Plos Pathogens 14, no. 4 (April 19, 2018): e1006944-null. Full Text
  - Dai, W, Wu, Y, Bi, J, Wang, S, Li, F, Kong, W, Barbier, J, Cintrat, J-C, Gao, F, Gillet, D, Su, W, and Jiang, C. "Antiviral Effects of ABMA against Herpes Simplex Virus Type 2 In Vitro and In Vivo." Viruses 10, no. 3 (March 9, 2018). Full Text
  - Gao, N, Wang, W, Wang, C, Gu, T, Guo, R, Yu, B, Kong, W, Qin, C, Giorgi, EE, Chen, Z, Townsley, S, Hu, S-L, Yu, X, and Gao, F. "Development of broad neutralization activity in simian/human immunodeficiency virus-infected rhesus macaques after long-term infection." AIDS (London, England) 32, no. 5 (March 2018): 555-563. Full Text
  - Gao, Y, Tian, W, Han, X, and Gao, F. "Immunological and virological characteristics of human immunodeficiency virus type 1 superinfection: implications in vaccine design." Frontiers of medicine 11, no. 4 (December 2017): 480-489. (Review) Full Text
  - Williams, WB, Zhang, J, Jiang, C, Nicely, NI, Fera, D, Luo, K, Moody, MA, Liao, H-X, Alam, SM, Kepler, TB, Ramesh, A, Wiehe, K, Holland, JA, Bradley, T, Vandergrift, N, Saunders, KO, Parks, R, Foulger, A, Xia, S-M, Bonsignori, M, Montefiori, DC, Louder, M, Eaton, A, Santra, S, Scearce, R, Sutherland, L, Newman, A, Bouton-Verville, H, Bowman, C, Bomze, H, Gao, F, Marshall, DJ, Whitesides, JF, Nie, X, Kelsoe, G, Reed, SG, Fox, CB, Clary, K, Koutsoukos, M, Franco, D, Mascola, JR, Harrison, SC, Haynes, BF, and Verkoczy, L. "Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations." Nature Communications 8, no. 1 (November 23, 2017): 1732-null. Full Text Open Access Copy
  - Liu, D, Wang, C, Hora, B, Zuo, T, Goonetilleke, N, Liu, MKP, Berrong, M, Ferrari, G, McMichael, AJ, Bhattacharya, T, Perelson, AS, and Gao, F. "A strongly selected mutation in the HIV-1 genome is independent of T cell responses and neutralizing antibodies." Retrovirology 14, no. 1 (October 10, 2017): 46-null. Full Text
  - Kou, Y, Xu, Y, Zhao, Z, Liu, J, Wu, Y, You, Q, Wang, L, Gao, F, Cai, L, and Jiang, C. "Tissue plasminogen activator (tPA) signal sequence enhances immunogenicity of MVA-based vaccine against tuberculosis." Immunology Letters 190 (October 2017): 51-57. Full Text
  - Rademeyer, C, Korber, B, Seaman, MS, Giorgi, EE, Thebus, R, Robles, A, Sheward, DJ, Wagh, K, Garrity, J, Carey, BR, Gao, H, Greene, KM, Tang, H, Bandawe, GP, Marais, JC, Diphoko, TE, Hraber, P, Tumba, N, Moore, PL, Gray, GE, Kublin, J, McElrath, MJ, Vermeulen, M, Middelkoop, K, Bekker, L-G, Hoelscher, M, Maboko, L, Makhema, J, Robb, ML, Karim, SA, Karim, QA, Kim, JH, Hahn, BH, Gao, F, Swanstrom, R, Morris, L, Montefiori, DC, and Williamson, C. "Correction: Features of Recently Transmitted HIV-1 Clade C Viruses that Impact Antibody Recognition: Implications for Active and Passive Immunization." PLoS pathogens 13, no. 9 (September 25, 2017): e1006641-. Full Text
  - Su, W, Li, X, Chen, M, Dai, W, Sun, S, Wang, S, Sheng, X, Sun, S, Gao, C, Hou, A, Zhou, Y, Sun, B, Gao, F, Xiao, J, Zhang, Z, and Jiang, C. "Synonymous codon usage analysis of hand, foot and mouth disease viruses: A comparative study on coxsackievirus A6, A10, A16, and enterovirus 71 from 2008 to 2015." Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases 53 (September 2017): 212-217. Full Text
  - Dai, W, Wu, Y, Bi, J, Lu, X, Hou, A, Zhou, Y, Sun, B, Kong, W, Barbier, J, Cintrat, J-C, Gao, F, Gillet, D, Su, W, and Jiang, C. "Antiviral effects of Retro-2cycl and Retro-2.1 against Enterovirus 71 in vitro and in vivo." Antiviral Research 144 (August 2017): 311-321. Full Text
  - Meyerhoff, RR, Scearce, RM, Ogburn, DF, Lockwood, B, Pickeral, J, Kuraoka, M, Anasti, K, Eudailey, J, Eaton, A, Cooper, M, Wiehe, K, Montefiori, DC, Tomaras, G, Ferrari, G, Alam, SM, Liao, H-X, Korber, B, Gao, F, and Haynes, BF. "HIV-1 Consensus Envelope-Induced Broadly Binding Antibodies." Aids Research and Human Retroviruses 33, no. 8 (August 2017): 859-868. Full Text
  - Kijak, GH, Sanders-Buell, E, Chenine, A-L, Eller, MA, Goonetilleke, N, Thomas, R, Leviyang, S, Harbolick, EA, Bose, M, Pham, P, Oropeza, C, Poltavee, K, O'Sullivan, AM, Billings, E, Merbah, M, Costanzo, MC, Warren, JA, Slike, B, Li, H, Peachman, KK, Fischer, W, Gao, F, Cicala, C, Arthos, J, Eller, LA, O'Connell, RJ, Sinei, S, Maganga, L, Kibuuka, H, Nitayaphan, S, Rao, M, Marovich, MA, Krebs, SJ, Rolland, M, Korber, BT, Shaw, GM, Michael, NL, Robb, ML, Tovanabutra, S, and Kim, JH. "Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection." Plos Pathogens 13, no. 7 (July 31, 2017): e1006510-null. Full Text
  - Wang, C, Jiang, C, Gao, N, Zhang, K, Liu, D, Wang, W, Cong, Z, Qin, C, Ganusov, VV, Ferrari, G, LaBranche, C, Montefiori, DC, Kong, W, Yu, X, and Gao, F. "Immunologic and Virologic Mechanisms for Partial Protection from Intravenous Challenge by an Integration-Defective SIV Vaccine." Viruses 9, no. 6 (June 2, 2017). Full Text
  - Liu, W, Zhou, Y, Wang, Z, Zhang, Z, Wang, Q, Su, W, Chen, Y, Zhang, Y, Gao, F, Jiang, C, and Kong, W. "Evaluation of recombinant adenovirus vaccines based on glycoprotein D and truncated UL25 against herpes simplex virus type 2 in mice." Microbiology and Immunology 61, no. 5 (May 2017): 176-184. Full Text
  - Bonsignori, M, Kreider, EF, Fera, D, Meyerhoff, RR, Bradley, T, Wiehe, K, Alam, SM, Aussedat, B, Walkowicz, WE, Hwang, K-K, Saunders, KO, Zhang, R, Gladden, MA, Monroe, A, Kumar, A, Xia, S-M, Cooper, M, Louder, MK, McKee, K, Bailer, RT, Pier, BW, Jette, CA, Kelsoe, G, Williams, WB, Morris, L, Kappes, J, Wagh, K, Kamanga, G, Cohen, MS, Hraber, PT, Montefiori, DC, Trama, A, Liao, H-X, Kepler, TB, Moody, MA, Gao, F, Danishefsky, SJ, Mascola, JR, Shaw, GM, Hahn, BH, Harrison, SC, Korber, BT, and Haynes, BF. "Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies." Science Translational Medicine 9, no. 381 (March 2017). Full Text
  - Bonsignori, M, Liao, H-X, Gao, F, Williams, WB, Alam, SM, Montefiori, DC, and Haynes, BF. "Antibody-virus co-evolution in HIV infection: paths for HIV vaccine development." Immunological Reviews 275, no. 1 (January 2017): 145-160. (Review) Full Text
  - Williams, LD, Ofek, G, Schätzle, S, McDaniel, JR, Lu, X, Nicely, NI, Wu, L, Lougheed, CS, Bradley, T, Louder, MK, McKee, K, Bailer, RT, O'Dell, S, Georgiev, IS, Seaman, MS, Parks, RJ, Marshall, DJ, Anasti, K, Yang, G, Nie, X, Tumba, NL, Wiehe, K, Wagh, K, Korber, B, Kepler, TB, Munir Alam, S, Morris, L, Kamanga, G, Cohen, MS, Bonsignori, M, Xia, S-M, Montefiori, DC, Kelsoe, G, Gao, F, Mascola, JR, Moody, MA, Saunders, KO, Liao, H-X, Tomaras, GD, Georgiou, G, and Haynes, BF. "Potent and broad HIV-neutralizing antibodies in memory B cells and plasma." Science Immunology 2, no. 7 (January 2017). Full Text
  - Song, H, Hora, B, Giorgi, EE, Kumar, A, Cai, F, Bhattacharya, T, Perelson, AS, and Gao, F. "Transmission of Multiple HIV-1 Subtype C Transmitted/founder Viruses into the Same Recipients Was not Determined by Modest Phenotypic Differences." Scientific Reports 6 (December 2, 2016): 38130-null. Full Text
  - Bradley, T, Trama, A, Tumba, N, Gray, E, Lu, X, Madani, N, Jahanbakhsh, F, Eaton, A, Xia, S-M, Parks, R, Lloyd, KE, Sutherland, LL, Scearce, RM, Bowman, CM, Barnett, S, Abdool-Karim, SS, Boyd, SD, Melillo, B, Smith, AB, Sodroski, J, Kepler, TB, Alam, SM, Gao, F, Bonsignori, M, Liao, H-X, Moody, MA, Montefiori, D, Santra, S, Morris, L, and Haynes, BF. "Amino Acid Changes in the HIV-1 gp41 Membrane Proximal Region Control Virus Neutralization Sensitivity." EBioMedicine 12 (October 2016): 196-207. Full Text
  - Li, X, Fan, P, Jiang, C, Ma, T, Yu, X, Kong, W, and Gao, F. "High-Frequency Illegitimate Strand Transfers of Nascent DNA Fragments During Reverse Transcription Result in Defective Retrovirus Genomes." Journal of acquired immune deficiency syndromes (1999) 72, no. 4 (August 2016): 353-362. Full Text
  - Moody, MA, Pedroza-Pacheco, I, Vandergrift, NA, Chui, C, Lloyd, KE, Parks, R, Soderberg, KA, Ogbe, AT, Cohen, MS, Liao, H-X, Gao, F, McMichael, AJ, Montefiori, DC, Verkoczy, L, Kelsoe, G, Huang, J, Shea, PR, Connors, M, Borrow, P, and Haynes, BF. "Immune perturbations in HIV-1-infected individuals who make broadly neutralizing antibodies." Science Immunology 1, no. 1 (July 29, 2016): aag0851-null. Full Text
  - Rademeyer, C, Korber, B, Seaman, MS, Giorgi, EE, Thebus, R, Robles, A, Sheward, DJ, Wagh, K, Garrity, J, Carey, BR, Gao, H, Greene, KM, Tang, H, Bandawe, GP, Marais, JC, Diphoko, TE, Hraber, P, Tumba, N, Moore, PL, Gray, GE, Kublin, J, McElrath, MJ, Vermeulen, M, Middelkoop, K, Bekker, L-G, Hoelscher, M, Maboko, L, Makhema, J, Robb, ML, Abdool Karim, S, Abdool Karim, Q, Kim, JH, Hahn, BH, Gao, F, Swanstrom, R, Morris, L, Montefiori, DC, and Williamson, C. "Features of Recently Transmitted HIV-1 Clade C Viruses that Impact Antibody Recognition: Implications for Active and Passive Immunization." Plos Pathogens 12, no. 7 (July 19, 2016): e1005742-null. Full Text
  - Bonsignori, M, Zhou, T, Sheng, Z, Chen, L, Gao, F, Joyce, MG, Ozorowski, G, Chuang, G-Y, Schramm, CA, Wiehe, K, Alam, SM, Bradley, T, Gladden, MA, Hwang, K-K, Iyengar, S, Kumar, A, Lu, X, Luo, K, Mangiapani, MC, Parks, RJ, Song, H, Acharya, P, Bailer, RT, Cao, A, Druz, A, Georgiev, IS, Kwon, YD, Louder, MK, Zhang, B, Zheng, A, Hill, BJ, Kong, R, Soto, C, NISC Comparative Sequencing Program, , Mullikin, JC, Douek, DC, Montefiori, DC, Moody, MA, Shaw, GM, Hahn, BH, Kelsoe, G, Hraber, PT, Korber, BT, Boyd, SD, Fire, AZ, Kepler, TB, Shapiro, L, Ward, AB, Mascola, JR, Liao, H-X, Kwong, PD, and Haynes, BF. "Maturation Pathway from Germline to Broad HIV-1 Neutralizer of a CD4-Mimic Antibody." Cell 165, no. 2 (April 2016): 449-463. Full Text
  - Zhang, R, Verkoczy, L, Wiehe, K, Munir Alam, S, Nicely, NI, Santra, S, Bradley, T, Pemble, CW, Zhang, J, Gao, F, Montefiori, DC, Bouton-Verville, H, Kelsoe, G, Larimore, K, Greenberg, PD, Parks, R, Foulger, A, Peel, JN, Luo, K, Lu, X, Trama, AM, Vandergrift, N, Tomaras, GD, Kepler, TB, Moody, MA, Liao, H-X, and Haynes, BF. "Initiation of immune tolerance-controlled HIV gp41 neutralizing B cell lineages." Science Translational Medicine 8, no. 336 (April 2016): 336ra62-null. Full Text
  - Chen, Y, Hora, B, DeMarco, T, Shah, SA, Ahmed, M, Sanchez, AM, Su, C, Carter, M, Stone, M, Hasan, R, Hasan, Z, Busch, MP, Denny, TN, and Gao, F. "Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan." PloS one 11, no. 12 (January 2016): e0167839-. Full Text Open Access Copy
  - Hora, B, Keating, SM, Chen, Y, Sanchez, AM, Sabino, E, Hunt, G, Ledwaba, J, Hackett, J, Swanson, P, Hewlett, I, Ragupathy, V, Vikram Vemula, S, Zeng, P, Tee, K-K, Chow, WZ, Ji, H, Sandstrom, P, Denny, TN, Busch, MP, Gao, F, and REDS-III and EQAPOL programs, . "Genetic Characterization of a Panel of Diverse HIV-1 Isolates at Seven International Sites." Plos One 11, no. 6 (January 2016): e0157340-null. Full Text Open Access Copy
  - Zhang, G, Cai, F, de Rivera, IL, Zhou, Z, Zhang, J, Nkengasong, J, Gao, F, and Yang, C. "Simultaneous Detection of Major Drug Resistance Mutations of HIV-1 Subtype B Viruses from Dried Blood Spot Specimens by Multiplex Allele-Specific Assay." Journal of clinical microbiology 54, no. 1 (January 2016): 220-222. Full Text
  - Jiang, L, Fan, R, Sun, S, Fan, P, Su, W, Zhou, Y, Gao, F, Xu, F, Kong, W, and Jiang, C. "A new EV71 VP3 epitope in norovirus P particle vector displays neutralizing activity and protection in vivo in mice." Vaccine 33, no. 48 (November 2015): 6596-6603. Full Text
  - Hraber, P, Korber, B, Wagh, K, Giorgi, EE, Bhattacharya, T, Gnanakaran, S, Lapedes, AS, Learn, GH, Kreider, EF, Li, Y, Shaw, GM, Hahn, BH, Montefiori, DC, Alam, SM, Bonsignori, M, Moody, MA, Liao, H-X, Gao, F, and Haynes, BF. "Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants." Viruses 7, no. 10 (October 21, 2015): 5443-5475. Full Text
  - Moody, MA, Gao, F, Gurley, TC, Amos, JD, Kumar, A, Hora, B, Marshall, DJ, Whitesides, JF, Xia, S-M, Parks, R, Lloyd, KE, Hwang, K-K, Lu, X, Bonsignori, M, Finzi, A, Vandergrift, NA, Alam, SM, Ferrari, G, Shen, X, Tomaras, GD, Kamanga, G, Cohen, MS, Sam, NE, Kapiga, S, Gray, ES, Tumba, NL, Morris, L, Zolla-Pazner, S, Gorny, MK, Mascola, JR, Hahn, BH, Shaw, GM, Sodroski, JG, Liao, H-X, Montefiori, DC, Hraber, PT, Korber, BT, and Haynes, BF. "Strain-Specific V3 and CD4 Binding Site Autologous HIV-1 Neutralizing Antibodies Select Neutralization-Resistant Viruses." Cell Host & Microbe 18, no. 3 (September 2015): 354-362. Full Text
  - Ma, Y-W, Hao, S-B, Sun, L-L, Li, J, Qiao, Q, Gao, F, Zhao, L, Yu, X-J, Wang, Z-Y, and Wen, H-L. "Construction and characterization of infectious cDNA clones of enterovirus 71 (EV71)." Virologica Sinica 30, no. 4 (August 11, 2015): 305-308. (Letter) Full Text
  - Santra, S, Tomaras, GD, Warrier, R, Nicely, NI, Liao, H-X, Pollara, J, Liu, P, Alam, SM, Zhang, R, Cocklin, SL, Shen, X, Duffy, R, Xia, S-M, Schutte, RJ, Pemble Iv, CW, Dennison, SM, Li, H, Chao, A, Vidnovic, K, Evans, A, Klein, K, Kumar, A, Robinson, J, Landucci, G, Forthal, DN, Montefiori, DC, Kaewkungwal, J, Nitayaphan, S, Pitisuttithum, P, Rerks-Ngarm, S, Robb, ML, Michael, NL, Kim, JH, Soderberg, KA, Giorgi, EE, Blair, L, Korber, BT, Moog, C, Shattock, RJ, Letvin, NL, Schmitz, JE, Moody, MA, Gao, F, Ferrari, G, Shaw, GM, and Haynes, BF. "Human Non-neutralizing HIV-1 Envelope Monoclonal Antibodies Limit the Number of Founder Viruses during SHIV Mucosal Infection in Rhesus Macaques." Plos Pathogens 11, no. 8 (August 3, 2015): e1005042-null. Full Text Open Access Copy
  - Blasi, M, Carpenter, JH, Balakumaran, B, Cara, A, Gao, F, and Klotman, ME. "Identification of HIV-1 genitourinary tract compartmentalization by analyzing the env gene sequences in urine." Aids (London, England) 29, no. 13 (August 2015): 1651-1657. Full Text
  - Chen, Y, Li, N, Zhang, T, Huang, X, Cai, F, Vandergrift, N, Xin, R, Meng, Z, Zhang, X, Jiang, C, Xu, X, Montefiori, DC, Gao, F, and Wu, H. "Comprehensive Characterization of the Transmitted/Founder env Genes From a Single MSM Cohort in China." Journal of Acquired Immune Deficiency Syndromes (1999) 69, no. 4 (August 2015): 403-412. Full Text
  - Williams, WB, Liao, H-X, Moody, MA, Kepler, TB, Alam, SM, Gao, F, Wiehe, K, Trama, AM, Jones, K, Zhang, R, Song, H, Marshall, DJ, Whitesides, JF, Sawatzki, K, Hua, A, Liu, P, Tay, MZ, Seaton, KE, Shen, X, Foulger, A, Lloyd, KE, Parks, R, Pollara, J, Ferrari, G, Yu, J-S, Vandergrift, N, Montefiori, DC, Sobieszczyk, ME, Hammer, S, Karuna, S, Gilbert, P, Grove, D, Grunenberg, N, McElrath, MJ, Mascola, JR, Koup, RA, Corey, L, Nabel, GJ, Morgan, C, Churchyard, G, Maenza, J, Keefer, M, Graham, BS, Baden, LR, Tomaras, GD, and Haynes, BF. "HIV-1 VACCINES. Diversion of HIV-1 vaccine-induced immunity by gp41-microbiota cross-reactive antibodies." Science (New York, N.Y.) 349, no. 6249 (August 2015): aab1253-null. Full Text
  - Demarco, T, Rountree, W, Hora, B, Chen, Y, Keinonen, S, Racz, L, Daniell, L, Louzao, R, Sanchez, A, Busch, M, Denny, T, and Gao, F. "HIV-1 subtype C is significantly more infectious than other subtypes." JOURNAL OF THE INTERNATIONAL AIDS SOCIETY 18 (July 2015). Full Text Open Access Copy Link to Item
  - Permar, SR, Fong, Y, Vandergrift, N, Fouda, GG, Gilbert, P, Parks, R, Jaeger, FH, Pollara, J, Martelli, A, Liebl, BE, Lloyd, K, Yates, NL, Overman, RG, Shen, X, Whitaker, K, Chen, H, Pritchett, J, Solomon, E, Friberg, E, Marshall, DJ, Whitesides, JF, Gurley, TC, Von Holle, T, Martinez, DR, Cai, F, Kumar, A, Xia, S-M, Lu, X, Louzao, R, Wilkes, S, Datta, S, Sarzotti-Kelsoe, M, Liao, H-X, Ferrari, G, Alam, SM, Montefiori, DC, Denny, TN, Moody, MA, Tomaras, GD, Gao, F, and Haynes, BF. "Maternal HIV-1 envelope-specific antibody responses and reduced risk of perinatal transmission." The Journal of Clinical Investigation 125, no. 7 (July 2015): 2702-2706. Full Text Open Access Copy
  - Fan, P, Li, X, Sun, S, Su, W, An, D, Gao, F, Kong, W, and Jiang, C. "Identification of a common epitope between enterovirus 71 and human MED25 proteins which may explain virus-associated neurological disease." Viruses 7, no. 4 (April 2015): 1558-1577. Full Text
  - Fan, P, Li, X, Su, W, Kong, W, Kong, X, Wang, Z, Wang, Y, Jiang, C, and Gao, F. "Enhanced Sensitivity for Detection of HIV-1 p24 Antigen by a Novel Nuclease-Linked Fluorescence Oligonucleotide Assay." PloS one 10, no. 4 (January 2015): e0125701-. Full Text
  - Liu, D, Zuo, T, Hora, B, Song, H, Kong, W, Yu, X, Goonetilleke, N, Bhattacharya, T, Perelson, AS, Haynes, BF, McMichael, AJ, and Gao, F. "Preexisting compensatory amino acids compromise fitness costs of a HIV-1 T cell escape mutation." Retrovirology 11 (November 19, 2014): 101-. Full Text Open Access Copy
  - Hraber, P, Korber, BT, Lapedes, AS, Bailer, RT, Seaman, MS, Gao, H, Greene, KM, McCutchan, F, Williamson, C, Kim, JH, Tovanabutra, S, Hahn, BH, Swanstrom, R, Thomson, MM, Gao, F, Harris, L, Giorgi, E, Hengartner, N, Bhattacharya, T, Mascola, JR, and Montefiori, DC. "Impact of clade, geography, and age of the epidemic on HIV-1 neutralization by antibodies." Journal of Virology 88, no. 21 (November 2014): 12623-12643. Full Text
  - Ritchie, AJ, Cai, F, Smith, NMG, Chen, S, Song, H, Brackenridge, S, Abdool Karim, SS, Korber, BT, McMichael, AJ, Gao, F, and Goonetilleke, N. "Recombination-mediated escape from primary CD8+ T cells in acute HIV-1 infection." Retrovirology 11 (September 12, 2014): 69-null. Full Text
  - Gao, F, Bonsignori, M, Liao, HX, Kumar, A, Xia, SM, Lu, X, Cai, F, Hwang, KK, Song, H, Zhou, T, Lynch, RM, Alam, SM, Moody, MA, Ferrari, G, Berrong, M, Kelsoe, G, Shaw, GM, Hahn, BH, Montefiori, DC, Kamanga, G, Cohen, MS, Hraber, P, Kwong, PD, Korber, BT, Mascola, JR, Kepler, TB, and Haynes, BF. "Cooperation of B cell lineages in induction of HIV-1-broadly neutralizing antibodies." Cell 158, no. 3 (July 31, 2014): 481-491. Full Text
  - Gao, F, Bonsignori, M, Liao, H-X, Kumar, A, Xia, S-M, Lu, X, Cai, F, Hwang, K-K, Song, H, Zhou, T, Lynch, RM, Alam, SM, Moody, MA, Ferrari, G, Berrong, M, Kelsoe, G, Shaw, GM, Hahn, BH, Montefiori, DC, Kamanga, G, Cohen, MS, Hraber, P, Kwong, PD, Korber, BT, Mascola, JR, Kepler, TB, and Haynes, BF. "Cooperation of B cell lineages in induction of HIV-1-broadly neutralizing antibodies." Cell 158, no. 3 (July 24, 2014): 481-491. Full Text
  - Fera, D, Schmidt, AG, Haynes, BF, Gao, F, Liao, H-X, Kepler, TB, and Harrison, SC. "Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains." Proceedings of the National Academy of Sciences of the United States of America 111, no. 28 (July 2014): 10275-10280. Full Text
  - Haynes, BF, Moody, MA, Alam, M, Bonsignori, M, Verkoczy, L, Ferrari, G, Gao, F, Tomaras, GD, Liao, H-X, and Kelsoe, G. "Progress in HIV-1 vaccine development." The Journal of Allergy and Clinical Immunology 134, no. 1 (July 2014): 3-11. (Review) Full Text
  - Sanchez, AM, DeMarco, CT, Hora, B, Keinonen, S, Chen, Y, Brinkley, C, Stone, M, Tobler, L, Keating, S, Schito, M, Busch, MP, Gao, F, and Denny, TN. "Development of a contemporary globally diverse HIV viral panel by the EQAPOL program." Journal of Immunological Methods 409 (July 2014): 117-130. Full Text Open Access Copy
  - Bonsignori, M, Wiehe, K, Grimm, SK, Lynch, R, Yang, G, Kozink, DM, Perrin, F, Cooper, AJ, Hwang, K-K, Chen, X, Liu, M, McKee, K, Parks, RJ, Eudailey, J, Wang, M, Clowse, M, Criscione-Schreiber, LG, Moody, MA, Ackerman, ME, Boyd, SD, Gao, F, Kelsoe, G, Verkoczy, L, Tomaras, GD, Liao, H-X, Kepler, TB, Montefiori, DC, Mascola, JR, and Haynes, BF. "An autoreactive antibody from an SLE/HIV-1 individual broadly neutralizes HIV-1." The Journal of Clinical Investigation 124, no. 4 (April 2014): 1835-1843. Full Text
  - Denny, TN. "Development of a contemporary globally diverse HIV viral panel by the EQAPOL program." Journal of Immunological Methods 409 (January 1, 2014): 117-130. (Review) Full Text
  - Liu, D, Zuo, T, Hora, B, Song, H, Kong, W, Yu, X, Goonetilleke, N, Bhattacharya, T, Perelson, AS, Haynes, BF, McMichael, AJ, and Gao, F. "Preexisting compensatory amino acids compromise fitness costs of a HIV-1 T cell escape mutation." Retrovirology (2014). Full Text
  - Liu, J, Song, H, Liu, D, Zuo, T, Lu, F, Zhuang, H, and Gao, F. "Extensive recombination due to heteroduplexes generates large amounts of artificial gene fragments during PCR." PloS one 9, no. 9 (January 2014): e106658-. Full Text
  - Song, H, Hora, B, Bhattacharya, T, Goonetilleke, N, Liu, MKP, Wiehe, K, Li, H, Iyer, SS, McMichael, AJ, Perelson, AS, and Gao, F. "Reversion and T cell escape mutations compensate the fitness loss of a CD8+ T cell escape mutant in their cognate transmitted/founder virus." PloS one 9, no. 7 (January 2014): e102734-. Full Text
  - Xiang, Y, Liu, W, Chen, Y, Zhang, C, Su, W, Zhang, Y, Sun, J, Gao, F, and Jiang, C. "The variable loop 3 in the envelope glycoprotein is critical for the atypical coreceptor usage of an HIV-1 strain." PloS one 9, no. 6 (January 2014): e98058-. Full Text
  - Fenton-May, AE, Dibben, O, Emmerich, T, Ding, H, Pfafferott, K, Aasa-Chapman, MM, Pellegrino, P, Williams, I, Cohen, MS, Gao, F, Shaw, GM, Hahn, BH, Ochsenbauer, C, Kappes, JC, and Borrow, P. "Relative resistance of HIV-1 founder viruses to control by interferon-alpha." Retrovirology 10 (December 3, 2013): 146-null. Full Text
  - Zhang, G, Cai, F, Zhou, Z, DeVos, J, Wagar, N, Diallo, K, Zulu, I, Wadonda-Kabondo, N, Stringer, JSA, Weidle, PJ, Ndongmo, CB, Sikazwe, I, Sarr, A, Kagoli, M, Nkengasong, J, Gao, F, and Yang, C. "Simultaneous detection of major drug resistance mutations in the protease and reverse transcriptase genes for HIV-1 subtype C by use of a multiplex allele-specific assay." Journal of Clinical Microbiology 51, no. 11 (November 2013): 3666-3674. Full Text
  - Permar, SR, Salazar, MG, Gao, F, Cai, F, Learn, GH, Kalilani, L, Hahn, BH, Shaw, GM, and Salazar-Gonzalez, JF. "Clonal amplification and maternal-infant transmission of nevirapine-resistant HIV-1 variants in breast milk following single-dose nevirapine prophylaxis." Retrovirology 10 (August 14, 2013): 88-null. Full Text
  - Liu, Y-F, Chen, M-F, Gao, Y, Cao, B, Dong, J-P, Zhang, Y-X, Gao, F, Hu, M, Ma, X-H, Jin, X-H, Xu, Q, and Wei, L. "[Etiologic characteristics of adult patients with community-acquired pneumonia in Beijing]." Zhonghua yi xue za zhi 93, no. 26 (July 2013): 2043-2047.
  - Ping, L-H, Joseph, SB, Anderson, JA, Abrahams, M-R, Salazar-Gonzalez, JF, Kincer, LP, Treurnicht, FK, Arney, L, Ojeda, S, Zhang, M, Keys, J, Potter, EL, Chu, H, Moore, P, Salazar, MG, Iyer, S, Jabara, C, Kirchherr, J, Mapanje, C, Ngandu, N, Seoighe, C, Hoffman, I, Gao, F, Tang, Y, Labranche, C, Lee, B, Saville, A, Vermeulen, M, Fiscus, S, Morris, L, Karim, SA, Haynes, BF, Shaw, GM, Korber, BT, Hahn, BH, Cohen, MS, Montefiori, D, Williamson, C, Swanstrom, R, Team, CAPRISAAIS, and Immunology, CHIV-AIDSV. "Comparison of Viral Env Proteins from Acute and Chronic Infections with Subtype C Human Immunodeficiency Virus Type 1 Identifies Differences in Glycosylation and CCR5 Utilization and Suggests a New Strategy for Immunogen Design." Journal of Virology 87, no. 13 (July 2013): 7218-7233. Full Text Link to Item
  - Liao, H-X, Lynch, R, Zhou, T, Gao, F, Alam, SM, Boyd, SD, Fire, AZ, Roskin, KM, Schramm, CA, Zhang, Z, Zhu, J, Shapiro, L, NISC Comparative Sequencing Program, , Mullikin, JC, Gnanakaran, S, Hraber, P, Wiehe, K, Kelsoe, G, Yang, G, Xia, S-M, Montefiori, DC, Parks, R, Lloyd, KE, Scearce, RM, Soderberg, KA, Cohen, M, Kamanga, G, Louder, MK, Tran, LM, Chen, Y, Cai, F, Chen, S, Moquin, S, Du, X, Joyce, MG, Srivatsan, S, Zhang, B, Zheng, A, Shaw, GM, Hahn, BH, Kepler, TB, Korber, BTM, Kwong, PD, Mascola, JR, and Haynes, BF. "Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus." Nature 496, no. 7446 (April 25, 2013): 469-476. Full Text Open Access Copy Link to Item
  - Parrish, NF, Gao, F, Li, H, Giorgi, EE, Barbian, HJ, Parrish, EH, Zajic, L, Iyer, SS, Decker, JM, Kumar, A, Hora, B, Berg, A, Cai, F, Hopper, J, Denny, TN, Ding, H, Ochsenbauer, C, Kappes, JC, Galimidi, RP, Jr, WAP, Bjorkman, PJ, Wilen, CB, Doms, RW, O'Brien, M, Bhardwaj, N, Borrow, P, Haynes, BF, Muldoon, M, Theiler, JP, Korber, B, Shaw, GM, and Hahn, BH. "Phenotypic properties of transmitted founder HIV-1." Proceedings of the National Academy of Sciences of the United States of America 110, no. 17 (April 23, 2013): 6626-6633. Full Text Open Access Copy Link to Item
  - Liao, H-X, Tsao, C-Y, Alam, SM, Muldoon, M, Vandergrift, N, Ma, B-J, Lu, X, Sutherland, LL, Scearce, RM, Bowman, C, Parks, R, Chen, H, Blinn, JH, Lapedes, A, Watson, S, Xia, S-M, Foulger, A, Hahn, BH, Shaw, GM, Swanstrom, R, Montefiori, DC, Gao, F, Haynes, BF, and Korber, B. "Antigenicity and immunogenicity of transmitted/founder, consensus, and chronic envelope glycoproteins of human immunodeficiency virus type 1." J Virol 87, no. 8 (April 2013): 4185-4201. Full Text Link to Item
  - Fouda, GG, Mahlokozera, T, Salazar-Gonzalez, JF, Salazar, MG, Learn, G, Kumar, SB, Dennison, SM, Russell, E, Rizzolo, K, Jaeger, F, Cai, F, Vandergrift, NA, Gao, F, Hahn, B, Shaw, GM, Ochsenbauer, C, Swanstrom, R, Meshnick, S, Mwapasa, V, Kalilani, L, Fiscus, S, Montefiori, D, Haynes, B, Kwiek, J, Alam, SM, and Permar, SR. "Postnatally-transmitted HIV-1 Envelope variants have similar neutralization-sensitivity and function to that of nontransmitted breast milk variants.(Published online)" Retrovirology 10 (January 10, 2013): 3-null. Full Text Open Access Copy Link to Item
  - Li, X, Fan, P, Jin, J, Su, W, An, D, Xu, L, Sun, S, Zhang, Y, Meng, X, Gao, F, Kong, W, and Jiang, C. "Establishment of cell lines with increased susceptibility to EV71/CA16 by stable overexpression of SCARB2." Virology Journal 10 (January 2013): 250-null. Full Text
  - Liu, MKP, Hawkins, N, Ritchie, AJ, Ganusov, VV, Whale, V, Brackenridge, S, Li, H, Pavlicek, JW, Cai, F, Rose-Abrahams, M, Treurnicht, F, Hraber, P, Riou, C, Gray, C, Ferrari, G, Tanner, R, Ping, L-H, Anderson, JA, Swanstrom, R, Chavi, CB, Cohen, M, Karim, SSA, Haynes, B, Borrow, P, Perelson, AS, Shaw, GM, Hahn, BH, Williamson, C, Korber, BT, Gao, F, Self, S, McMichael, A, and Goonetilleke, N. "Vertical T cell immunodominance and epitope entropy determine HIV-1 escape." Journal of Clinical Investigation 123, no. 1 (January 2013): 380-393. Full Text Link to Item
  - Ma, J, Zhang, Y, Chen, X, Jin, Y, Chen, D, Wu, Y, Cui, J, Wang, H, Liu, J, Li, N, and Gao, F. "Association of Preexisting Drug-Resistance Mutations and Treatment Failure in Hepatitis B Patients." PLoS ONE 8, no. 7 (2013). Full Text
  - Wen, H-L, Si, L-Y, Yuan, X-J, Hao, S-B, Gao, F, Chu, F-L, Sun, C-X, and Wang, Z-Y. "Complete genome sequencing and analysis of six enterovirus 71 strains with different clinical phenotypes." Virology Journal 10 (January 2013): 115-null. Full Text Open Access Copy
  - Song, H, Pavlicek, JW, Cai, F, Bhattacharya, T, Li, H, Iyer, SS, Bar, KJ, Decker, JM, Goonetilleke, N, Liu, MKP, Berg, A, Hora, B, Drinker, MS, Eudailey, J, Pickeral, J, Moody, MA, Ferrari, G, McMichael, A, Perelson, AS, Shaw, GM, Hahn, BH, Haynes, BF, and Gao, F. "Impact of immune escape mutations on HIV-1 fitness in the context of the cognate transmitted/founder genome.(Published online)" Retrovirology 9 (October 30, 2012): 89-null. Full Text Link to Item
  - Song, H, Ren, F, Li, J, Shi, S, Yan, L, Gao, F, Li, K, and Zhuang, H. "A laboratory-adapted HCV JFH-1 strain is sensitive to neutralization and can gradually escape under the selection pressure of neutralizing human plasma." VIRUS RESEARCH 169, no. 1 (October 2012): 154-161. Full Text Link to Item
  - Fouda, GG, Mahlokozera, T, Rizzolo, K, Salazar-Gonzalez, J, Salazar, M, Learn, G, Barotra, S, Sekaran, M, Russell, E, Jaeger, F, Cai, F, Gao, F, Hahn, B, Swanstrom, R, Meshnick, S, Mwapasa, V, Kalilani, L, Fiscus, S, Montefiori, D, Haynes, B, Kwiek, J, Alam, M, and Permar, S. "Postnatally-transmitted HIV-1 variants are efficient at dendritic cell trans-infection and sensitive to autologous and heterologous neutralization." Retrovirology 9, no. S2 (September 2012). Full Text
  - Montefiori, D, Tang, H, Gnanakaran, S, Gao, F, Bonsignori, M, Binley, J, Tomaras, G, Morris, L, Cohen, M, Rosenberg, E, Seaman, M, Robinson, J, Shaw, G, LaBranche, C, Liao, H-X, Mascola, J, Haynes, B, and Korber, B. "116 Autologous and Heterologous Neutralizing Antibody Responses in HIV-1 Infection." JAIDS Journal of Acquired Immune Deficiency Syndromes 59 (April 2012): 47-47. Full Text
  - Bar, KJ, Tsao, C-Y, Iyer, SS, Decker, JM, Yang, Y, Bonsignori, M, Chen, X, Hwang, K-K, Montefiori, DC, Liao, H-X, Hraber, P, Fischer, W, Li, H, Wang, S, Sterrett, S, Keele, BF, Ganusov, VV, Perelson, AS, Korber, BT, Georgiev, I, McLellan, JS, Pavlicek, JW, Gao, F, Haynes, BF, Hahn, BH, Kwong, PD, and Shaw, GM. "Early low-titer neutralizing antibodies impede HIV-1 replication and select for virus escape." Plos Pathog 8, no. 5 (2012): e1002721-null. Full Text Link to Item
  - Parrish, NF, Wilen, CB, Banks, LB, Iyer, SS, Pfaff, JM, Salazar-Gonzalez, JF, Salazar, MG, Decker, JM, Parrish, EH, Berg, A, Hopper, J, Hora, B, Kumar, A, Mahlokozera, T, Yuan, S, Coleman, C, Vermeulen, M, Ding, H, Ochsenbauer, C, Tilton, JC, Permar, SR, Kappes, JC, Betts, MR, Busch, MP, Gao, F, Montefiori, D, Haynes, BF, Shaw, GM, Hahn, BH, and Doms, RW. "Transmitted/founder and chronic subtype C HIV-1 use CD4 and CCR5 receptors with equal efficiency and are not inhibited by blocking the integrin α4β7." Plos Pathog 8, no. 5 (2012): e1002686-null. Full Text Link to Item
  - Liu, P, Overman, RG, Yates, NL, Alam, SM, Vandergrift, N, Chen, Y, Graw, F, Freel, SA, Kappes, JC, Ochsenbauer, C, Montefiori, DC, Gao, F, Perelson, AS, Cohen, MS, Haynes, BF, and Tomaras, GD. "Dynamic antibody specificities and virion concentrations in circulating immune complexes in acute to chronic HIV-1 infection." J Virol 85, no. 21 (November 2011): 11196-11207. Full Text Link to Item
  - Tomaras, GD, Binley, JM, Gray, ES, Crooks, ET, Osawa, K, Moore, PL, Tumba, N, Tong, T, Shen, X, Yates, NL, Decker, J, Wibmer, CK, Gao, F, Alam, SM, Easterbrook, P, Abdool Karim, S, Kamanga, G, Crump, JA, Cohen, M, Shaw, GM, Mascola, JR, Haynes, BF, Montefiori, DC, and Morris, L. "Polyclonal B cell responses to conserved neutralization epitopes in a subset of HIV-1-infected individuals." J Virol 85, no. 21 (November 2011): 11502-11519. Full Text Link to Item
  - Liao, H-X, Chen, X, Munshaw, S, Zhang, R, Marshall, DJ, Vandergrift, N, Whitesides, JF, Lu, X, Yu, J-S, Hwang, K-K, Gao, F, Markowitz, M, Heath, SL, Bar, KJ, Goepfert, PA, Montefiori, DC, Shaw, GC, Alam, SM, Margolis, DM, Denny, TN, Boyd, SD, Marshal, E, Egholm, M, Simen, BB, Hanczaruk, B, Fire, AZ, Voss, G, Kelsoe, G, Tomaras, GD, Moody, MA, Kepler, TB, and Haynes, BF. "Initial antibodies binding to HIV-1 gp41 in acutely infected subjects are polyreactive and highly mutated." J Exp Med 208, no. 11 (October 24, 2011): 2237-2249. Full Text Open Access Copy Link to Item
  - Jiang, C, Parrish, NF, Wilen, CB, Li, H, Chen, Y, Pavlicek, JW, Berg, A, Lu, X, Song, H, Tilton, JC, Pfaff, JM, Henning, EA, Decker, JM, Moody, MA, Drinker, MS, Schutte, R, Freel, S, Tomaras, GD, Nedellec, R, Mosier, DE, Haynes, BF, Shaw, GM, Hahn, BH, Doms, RW, and Gao, F. "Primary infection by a human immunodeficiency virus with atypical coreceptor tropism." J Virol 85, no. 20 (October 2011): 10669-10681. Full Text Link to Item
  - Gnanakaran, S, Bhattacharya, T, Daniels, M, Keele, BF, Hraber, PT, Lapedes, AS, Shen, T, Gaschen, B, Krishnamoorthy, M, Li, H, Decker, JM, Salazar-Gonzalez, JF, Wang, S, Jiang, C, Gao, F, Swanstrom, R, Anderson, JA, Ping, L-H, Cohen, MS, Markowitz, M, Goepfert, PA, Saag, MS, Eron, JJ, Hicks, CB, Blattner, WA, Tomaras, GD, Asmal, M, Letvin, NL, Gilbert, PB, Decamp, AC, Magaret, CA, Schief, WR, Ban, Y-EA, Zhang, M, Soderberg, KA, Sodroski, JG, Haynes, BF, Shaw, GM, Hahn, BH, and Korber, B. "Recurrent signature patterns in HIV-1 B clade envelope glycoproteins associated with either early or chronic infections." Plos Pathog 7, no. 9 (September 2011): e1002209-null. Full Text Link to Item
  - Liu, J, Chen, X, Xie, Q, Zhang, W, Wei, L, Shen, T, Xu, Q, Zhuang, H, Gao, F, and Lu, F. "Drug resistance and HCV coinfection in former blood donors infected with HIV type 1 in China." Aids Research and Human Retroviruses 27, no. 8 (August 2011): 925-930. Full Text
  - Wang, D, Hicks, CB, Goswami, ND, Tafoya, E, Ribeiro, RM, Cai, F, Perelson, AS, and Gao, F. "Evolution of drug-resistant viral populations during interruption of antiretroviral therapy." Journal of Virology 85, no. 13 (July 2011): 6403-6415. Full Text
  - Wen, HL, Hao, SB, Gao, F, Zhao, L, Si, LY, Yuan, XJ, Wang, DX, and Wang, ZY. "Sequence analysis for full length genomes of human enterovirus 71 strains isolated in Linyi, Shandong Province." Chinese Journal of Microbiology and Immunology (China) 31, no. 7 (July 1, 2011): 603-608. Full Text
  - Liu, J, Miller, MD, Danovich, RM, Vandergrift, N, Cai, F, Hicks, CB, Hazuda, DJ, and Gao, F. "Analysis of low-frequency mutations associated with drug resistance to raltegravir before antiretroviral treatment." Antimicrobial Agents and Chemotherapy 55, no. 3 (March 2011): 1114-1119. Full Text
  - Kirchherr, JL, Hamilton, J, Lu, X, Gnanakaran, S, Muldoon, M, Daniels, M, Kasongo, W, Chalwe, V, Mulenga, C, Mwananyanda, L, Musonda, RM, Yuan, X, Montefiori, DC, Korber, BT, Haynes, BF, and Gao, F. "Identification of amino acid substitutions associated with neutralization phenotype in the human immunodeficiency virus type-1 subtype C gp120." Virology 409, no. 2 (January 20, 2011): 163-174. Full Text Link to Item
  - Song, H-S, Shi, S, Lu, X-Z, Gao, F, Yan, L, Wang, Y, and Zhuang, H. "Intracellular CMTM2 negatively regulates human immunodeficiency virus type-1 transcription through targeting the transcription factors AP-1 and CREB." Chinese Medical Journal 123, no. 17 (September 2010): 2440-2445.
  - Lu, X, Hora, B, Cai, F, and Gao, F. "Generation of random mutant libraries with multiple primers in a single reaction." J Virol Methods 167, no. 2 (August 2010): 146-151. Full Text Link to Item
  - Weaver, EA, Camacho, ZT, and Gao, F. "Similar T-cell immune responses induced by group M consensus env immunogens with wild-type or minimum consensus variable regions." Aids Research and Human Retroviruses 26, no. 5 (May 2010): 577-584. Full Text Open Access Copy
  - Shen, X, Dennison, SM, Liu, P, Gao, F, Jaeger, F, Montefiori, DC, Verkoczy, L, Haynes, BF, Alam, SM, and Tomaras, GD. "Prolonged exposure of the HIV-1 gp41 membrane proximal region with L669S substitution." Proceedings of the National Academy of Sciences of the United States of America 107, no. 13 (March 15, 2010): 5972-5977. Full Text
  - Goonetilleke, N, Liu, MK, Ganusov, V, Giorgi, E, Salazar, J, Li, H, Kirchner, J, Turnbull, E, Bourne, V, Moore, S, Yang, H, Keele, B, Borrow, P, Cohen, M, Perelson, A, Gao, F, Hahn, B, Shaw, G, Korber, BT, and McMichael, AJ. "The Role of T Cell Immunity in the Control of HIV Infection." International Journal of Infectious Diseases 14 (March 2010): e19-e20. Full Text
  - Planque, S, Salas, M, Mitsuda, Y, Sienczyk, M, Escobar, MA, Mooney, JP, Morris, M-K, Nishiyama, Y, Ghosh, D, Kumar, A, Gao, F, Hanson, CV, and Paul, S. "Neutralization of genetically diverse HIV-1 strains by IgA antibodies to the gp120-CD4-binding site from long-term survivors of HIV infection." Aids (London, England) 24, no. 6 (March 2010): 875-884. Full Text
  - Gnanakaran, S, Daniels, MG, Bhattacharya, T, Lapedes, AS, Sethi, A, Li, M, Tang, H, Greene, K, Gao, H, Haynes, BF, Cohen, MS, Shaw, GM, Seaman, MS, Kumar, A, Gao, F, Montefiori, DC, and Korber, B. "Genetic signatures in the envelope glycoproteins of HIV-1 that associate with broadly neutralizing antibodies." Plos Computational Biology 6, no. 10 (January 2010): e1000955-null. Full Text Open Access Copy
  - Gao, F, Scearce, RM, Alam, SM, Hora, B, Xia, S, Hohm, JE, Parks, RJ, Ogburn, DF, Tomaras, GD, Park, E, Lomas, WE, Maino, VC, Fiscus, SA, Cohen, MS, Moody, MA, Hahn, BH, Korber, BT, Liao, H-X, and Haynes, BF. "Cross-reactive monoclonal antibodies to multiple HIV-1 subtype and SIVcpz envelope glycoproteins." Virology 394, no. 1 (November 2009): 91-98. Full Text
  - Kirchherr, JL, Hopper, J, Chen, S, Pavlicek, J, Keele, B, Goonetilleke, N, McMichael, A, Haynes, BF, and Gao, F. "P20-17. Evolution of multiple transmitted viruses during the early stage of HIV-1 infection." Retrovirology 6, no. SUPPL. 3 (October 22, 2009). Full Text
  - Liao, H-X, Levesque, MC, Nagel, A, Dixon, A, Zhang, R, Walter, E, Parks, R, Whitesides, J, Marshall, DJ, Hwang, K-K, Yang, Y, Chen, X, Gao, F, Munshaw, S, Kepler, TB, Denny, T, Moody, MA, and Haynes, BF. "High-throughput isolation of immunoglobulin genes from single human B cells and expression as monoclonal antibodies." Journal of Virological Methods 158, no. 1-2 (June 2009): 171-179. Full Text
  - Shen, X, Parks, RJ, Montefiori, DC, Kirchherr, JL, Keele, BF, Decker, JM, Blattner, WA, Gao, F, Weinhold, KJ, Hicks, CB, Greenberg, ML, Hahn, BH, Shaw, GM, Haynes, BF, and Tomaras, GD. "In vivo gp41 antibodies targeting the 2F5 monoclonal antibody epitope mediate human immunodeficiency virus type 1 neutralization breadth." Journal of Virology 83, no. 8 (April 2009): 3617-3625. Full Text
  - Lin, JW, Hao, LX, Xu, GX, Sun, F, Gao, F, Zhang, R, and Liu, LX. "Molecular cloning and recombinant expression of a gene encoding a fungal immunomodulatory protein from Ganoderma lucidum in Pichia pastoris." World Journal of Microbiology and Biotechnology 25, no. 3 (March 1, 2009): 383-390. Full Text
  - Kirchherr, JL, Hopper, J, Chen, S, Pavlicek, J, Keele, B, Goonetilleke, N, McMichael, A, Haynes, BF, and Gao, F. "Evolution of multiple transmitted viruses during the early stage of HIV-1 infection." RETROVIROLOGY 6 (2009). Full Text Link to Item
  - Pavlicek, JW, Chen, S, Hopper, J, Kirchherr, J, and Gao, F. "Identification of low frequency genetic variants during acute and early infection by parallel-allele specific sequencing." RETROVIROLOGY 6 (2009). Full Text Link to Item
  - Santra, S, Korber, BT, Muldoon, M, Barouch, DH, Nabel, GJ, Gao, F, Hahn, BH, Haynes, BF, and Letvin, NL. "A centralized gene-based HIV-1 vaccine elicits broad cross-clade cellular immune responses in rhesus monkeys." Proceedings of the National Academy of Sciences of the United States of America 105, no. 30 (July 23, 2008): 10489-10494. Full Text
  - Keele, BF, Giorgi, EE, Salazar-Gonzalez, JF, Decker, JM, Pham, KT, Salazar, MG, Sun, C, Grayson, T, Wang, S, Li, H, Wei, X, Jiang, C, Kirchherr, JL, Gao, F, Anderson, JA, Ping, L-H, Swanstrom, R, Tomaras, GD, Blattner, WA, Goepfert, PA, Kilby, JM, Saag, MS, Delwart, EL, Busch, MP, Cohen, MS, Montefiori, DC, Haynes, BF, Gaschen, B, Athreya, GS, Lee, HY, Wood, N, Seoighe, C, Perelson, AS, Bhattacharya, T, Korber, BT, Hahn, BH, and Shaw, GM. "Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection." Proceedings of the National Academy of Sciences of the United States of America 105, no. 21 (May 19, 2008): 7552-7557. Full Text
  - Ramadhani, HO, Thielman, NM, Landman, KZ, Ndosi, EM, Gao, F, Kirchherr, JL, Shah, R, Shao, HJ, Morpeth, SC, McNeill, JD, Shao, JF, Bartlett, JA, and Crump, JA. "Predictors of incomplete adherence, virologic failure, and antiviral drug resistance among HIV-infected adults receiving antiretroviral therapy in Tanzania." Clinical Infectious Diseases : an Official Publication of the Infectious Diseases Society of America 45, no. 11 (December 2007): 1492-1498. Full Text
  - Gao, F, Liao, H-X, Hahn, BH, Letvin, NL, Korber, BT, and Haynes, BF. "Centralized HIV-1 envelope immunogens and neutralizing antibodies." Current Hiv Research 5, no. 6 (November 2007): 572-577. (Review) Full Text
  - Masse, S, Lu, X, Dekhtyar, T, Lu, L, Koev, G, Gao, F, Mo, H, Kempf, D, Bernstein, B, Hanna, GJ, and Molla, A. "In vitro selection and characterization of human immunodeficiency virus type 2 with decreased susceptibility to lopinavir." Antimicrobial Agents and Chemotherapy 51, no. 9 (September 2007): 3075-3080. Full Text
  - Kirchherr, JL, Lu, X, Kasongo, W, Chalwe, V, Mwananyanda, L, Musonda, RM, Xia, S-M, Scearce, RM, Liao, H-X, Montefiori, DC, Haynes, BF, and Gao, F. "High throughput functional analysis of HIV-1 env genes without cloning." Journal of Virological Methods 143, no. 1 (July 2007): 104-111. Full Text
  - Gao, F, and Wang, D. "Minor-drug-resistant HIV populations and treatment failure." Future Virology 2, no. 3 (May 1, 2007): 293-302. (Review) Full Text
  - Alam, SM, McAdams, M, Boren, D, Rak, M, Scearce, RM, Gao, F, Camacho, ZT, Gewirth, D, Kelsoe, G, Chen, P, and Haynes, BF. "The role of antibody polyspecificity and lipid reactivity in binding of broadly neutralizing anti-HIV-1 envelope human monoclonal antibodies 2F5 and 4E10 to glycoprotein 41 membrane proximal envelope epitopes." Journal of Immunology (Baltimore, Md. : 1950) 178, no. 7 (April 2007): 4424-4435. Full Text
  - Kothe, DL, Decker, JM, Li, Y, Weng, Z, Bibollet-Ruche, F, Zammit, KP, Salazar, MG, Chen, Y, Salazar-Gonzalez, JF, Moldoveanu, Z, Mestecky, J, Gao, F, Haynes, BF, Shaw, GM, Muldoon, M, Korber, BTM, and Hahn, BH. "Antigenicity and immunogenicity of HIV-1 consensus subtype B envelope glycoproteins." Virology 360, no. 1 (March 2007): 218-234. Full Text
  - Cai, F, Chen, H, Hicks, CB, Bartlett, JA, Zhu, J, and Gao, F. "Detection of minor drug-resistant populations by parallel allele-specific sequencing." Nature Methods 4, no. 2 (February 2007): 123-125. Full Text
  - Cai, F, Chen, H, Hicks, CB, Bartlett, JA, Zhu, J, and Gao, F. "Erratum: ProteomeBinders: Planning a European resource of affinity reagents for analysis of the human proteome (Nature Methods (2007) vol. 4 (13-17))." Nature Methods 4, no. 2 (February 1, 2007): 187-null. Full Text
  - Gao, F. "More sensitive assays for better drug resistance prediction?." Pharmacogenomics 8, no. 6 (2007): 533-536. Full Text
  - Li, M, Salazar-Gonzalez, JF, Derdeyn, CA, Morris, L, Williamson, C, Robinson, JE, Decker, JM, Li, Y, Salazar, MG, Polonis, VR, Mlisana, K, Karim, SA, Hong, K, Greene, KM, Bilska, M, Zhou, J, Allen, S, Chomba, E, Mulenga, J, Vwalika, C, Gao, F, Zhang, M, Korber, BTM, Hunter, E, Hahn, BH, and Montefiori, DC. "Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa." Journal of Virology 80, no. 23 (December 2006): 11776-11790. Full Text
  - Kothe, DL, Li, Y, Decker, JM, Bibollet-Ruche, F, Zammit, KP, Salazar, MG, Chen, Y, Weng, Z, Weaver, EA, Gao, F, Haynes, BF, Shaw, GM, Korber, BTM, and Hahn, BH. "Ancestral and consensus envelope immunogens for HIV-1 subtype C." Virology 352, no. 2 (September 2006): 438-449. Full Text
  - Liao, H-X, Sutherland, LL, Xia, S-M, Brock, ME, Scearce, RM, Vanleeuwen, S, Alam, SM, McAdams, M, Weaver, EA, Camacho, Z, Ma, B-J, Li, Y, Decker, JM, Nabel, GJ, Montefiori, DC, Hahn, BH, Korber, BT, Gao, F, and Haynes, BF. "A group M consensus envelope glycoprotein induces antibodies that neutralize subsets of subtype B and C HIV-1 primary viruses." Virology 353, no. 2 (September 2006): 268-282. Full Text
  - Weaver, EA, Lu, Z, Camacho, ZT, Moukdar, F, Liao, H-X, Ma, B-J, Muldoon, M, Theiler, J, Nabel, GJ, Letvin, NL, Korber, BT, Hahn, BH, Haynes, BF, and Gao, F. "Cross-subtype T-cell immune responses induced by a human immunodeficiency virus type 1 group m consensus env immunogen." Journal of Virology 80, no. 14 (July 2006): 6745-6756. Full Text
  - Song, X-T, Evel-Kabler, K, Rollins, L, Aldrich, M, Gao, F, Huang, XF, and Chen, S-Y. "An alternative and effective HIV vaccination approach based on inhibition of antigen presentation attenuators in dendritic cells." Plos Medicine 3, no. 1 (January 3, 2006): e11-null. Full Text
  - Li, M, Gao, F, Mascola, JR, Stamatatos, L, Polonis, VR, Koutsoukos, M, Voss, G, Goepfert, P, Gilbert, P, Greene, KM, Bilska, M, Kothe, DL, Salazar-Gonzalez, JF, Wei, X, Decker, JM, Hahn, BH, and Montefiori, DC. "Human immunodeficiency virus type 1 env clones from acute and early subtype B infections for standardized assessments of vaccine-elicited neutralizing antibodies." Journal of Virology 79, no. 16 (August 2005): 10108-10125. Full Text
  - Betts, MR, Exley, B, Price, DA, Bansal, A, Camacho, ZT, Teaberry, V, West, SM, Ambrozak, DR, Tomaras, G, Roederer, M, Kilby, JM, Tartaglia, J, Belshe, R, Gao, F, Douek, DC, Weinhold, KJ, Koup, RA, Goepfert, P, and Ferrari, G. "Characterization of functional and phenotypic changes in anti-Gag vaccine-induced T cell responses and their role in protection after HIV-1 infection." Proceedings of the National Academy of Sciences of the United States of America 102, no. 12 (March 7, 2005): 4512-4517. Full Text
  - Switzer, WM, Salemi, M, Shanmugam, V, Gao, F, Cong, M-E, Kuiken, C, Bhullar, V, Beer, BE, Vallet, D, Gautier-Hion, A, Tooze, Z, Villinger, F, Holmes, EC, and Heneine, W. "Ancient co-speciation of simian foamy viruses and primates." Nature 434, no. 7031 (March 2005): 376-380. Full Text
  - Bi, MR, Yang, BS, Ma, YJ, Chen, LY, Wang, Y, Gao, F, and Wang, FX. "Effect of SNMC on inhibiting hepatocyte apoptosis induced by Fas/FasL in mice with fulminant hepatic failure." World Chinese Journal of Digestology 13, no. 1 (January 1, 2005): 26-30.
  - Chen, L-Y, Yang, B-S, Ma, Y-J, Bi, M-R, and Gao, F. "Protective effect of SNMC on mice with fulminant liver failure." Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology 13, no. 3 (2005): 209-212.
  - Gao, F, Weaver, EA, Lu, Z, Li, Y, Liao, H-X, Ma, B, Alam, SM, Scearce, RM, Sutherland, LL, Yu, J-S, Decker, JM, Shaw, GM, Montefiori, DC, Korber, BT, Hahn, BH, and Haynes, BF. "Antigenicity and immunogenicity of a synthetic human immunodeficiency virus type 1 group m consensus envelope glycoprotein." Journal of Virology 79, no. 2 (January 2005): 1154-1163. Full Text
  - Gao, F. "Detection of HIV-2 by PCR." Methods in Molecular Biology (Clifton, N.J.) 304 (January 2005): 191-200. Full Text
  - Gao, F. "Amplification and cloning of near full-length HIV-2 genomes." Methods Mol Biol 304 (2005): 399-407. Full Text Link to Item
  - Bibollet-Ruche, F, Gao, F, Bailes, E, Saragosti, S, Delaporte, E, Peeters, M, Shaw, GM, Hahn, BH, and Sharp, PM. "Complete genome analysis of one of the earliest SIVcpzPtt strains from Gabon (SIVcpzGAB2)." Aids Research and Human Retroviruses 20, no. 12 (December 2004): 1377-1381. Full Text
  - Gaddis, NC, Sheehy, AM, Ahmad, KM, Swanson, CM, Bishop, KN, Beer, BE, Marx, PA, Gao, F, Bibollet-Ruche, F, Hahn, BH, and Malim, MH. "Further investigation of simian immunodeficiency virus Vif function in human cells." Journal of Virology 78, no. 21 (November 2004): 12041-12046. Full Text
  - Meissner, EG, Duus, KM, Gao, F, Yu, X-F, and Su, L. "Characterization of a thymus-tropic HIV-1 isolate from a rapid progressor: role of the envelope." Virology 328, no. 1 (October 2004): 74-88. Full Text
  - Gao, F, Korber, BT, Weaver, E, Liao, H-X, Hahn, BH, and Haynes, BF. "Centralized immunogens as a vaccine strategy to overcome HIV-1 diversity." Expert Review of Vaccines 3, no. 4 Suppl (August 2004): S161-S168. (Review) Full Text
  - Gao, F, Korber, BT, Weaver, E, Liao, H-X, Hahn, BH, and Haynes, BF. "Centralized immunogens as a vaccine strategy to overcome HIV-1 diversity." Expert Review of Vaccines 3, no. sup1 (August 2004): S161-S168. Full Text
  - Bibollet-Ruche, F, Bailes, E, Gao, F, Pourrut, X, Barlow, KL, Clewley, JP, Mwenda, JM, Langat, DK, Chege, GK, McClure, HM, Mpoudi-Ngole, E, Delaporte, E, Peeters, M, Shaw, GM, Sharp, PM, and Hahn, BH. "New simian immunodeficiency virus infecting De Brazza's monkeys (Cercopithecus neglectus): evidence for a cercopithecus monkey virus clade." Journal of Virology 78, no. 14 (July 2004): 7748-7762. Full Text
  - Gao, F, Chen, Y, Levy, DN, Conway, JA, Kepler, TB, and Hui, H. "Unselected mutations in the human immunodeficiency virus type 1 genome are mostly nonsynonymous and often deleterious." Journal of Virology 78, no. 5 (March 2004): 2426-2433. Full Text
  - Gao, F, Li, Y, Decker, JM, Peyerl, FW, Bibollet-Ruche, F, Rodenburg, CM, Chen, Y, Shaw, DR, Allen, S, Musonda, R, Shaw, GM, Zajac, AJ, Letvin, N, and Hahn, BH. "Codon usage optimization of HIV type 1 subtype C gag, pol, env, and nef genes: in vitro expression and immune responses in DNA-vaccinated mice." Aids Research and Human Retroviruses 19, no. 9 (September 2003): 817-823. Full Text
  - Bailes, E, Gao, F, Bibollet-Ruche, F, Courgnaud, V, Peeters, M, Marx, PA, Hahn, BH, and Sharp, PM. "Hybrid origin of SIV in chimpanzees." Science (New York, N.Y.) 300, no. 5626 (June 2003): 1713-null. Full Text
  - Montefiori, DC, Altfeld, M, Lee, PK, Bilska, M, Zhou, J, Johnston, MN, Gao, F, Walker, BD, and Rosenberg, ES. "Viremia control despite escape from a rapid and potent autologous neutralizing antibody response after therapy cessation in an HIV-1-infected individual." Journal of Immunology (Baltimore, Md. : 1950) 170, no. 7 (April 2003): 3906-3914. Full Text
  - Allen, S, Meinzen-Derr, J, Kautzman, M, Zulu, I, Trask, S, Fideli, U, Musonda, R, Kasolo, F, Gao, F, and Haworth, A. "Sexual behavior of HIV discordant couples after HIV counseling and testing." Aids 17, no. 5 (March 28, 2003): 733-740. Full Text
  - Gao, F, Bhattacharya, T, Gaschen, B, Taylor, J, Moore, JP, Novitsky, V, Yusim, K, Lang, D, Foley, B, Beddows, S, Alam, M, Haynes, B, Hahn, BH, and Korber, B. "Consensus and ancestral state HIV vaccines - Response." SCIENCE 299, no. 5612 (March 7, 2003): 1517-1518. Link to Item
  - Allen, S, Meinzen-Derr, J, Kautzman, M, Zulu, I, Trask, S, Fideli, U, Musonda, R, Kasolo, F, Gao, F, and Haworth, A. "Sexual behavior of HIV discordant couples after HIV counseling and testing." Aids (London, England) 17, no. 5 (March 2003): 733-740. Full Text
  - Nickle, DC, Jensen, MA, Gottlieb, GS, Shriner, D, Learn, GH, Rodrigo, AG, and Mullins, JI. "Consensus and ancestral state HIV vaccines." Science (New York, N.Y.) 299, no. 5612 (March 2003): 1515-1518. (Letter) Full Text
  - McClutchan, FE, Carr, JK, Murphy, D, Piyasirisilp, S, Gao, F, Hahn, B, Yu, XF, Beyrer, C, and Birx, DL. "Precise mapping of recombination breakpoints suggests a common parent of two BC recombinant HIV type 1 strains circulating in China." Aids Research and Human Retroviruses 18, no. 15 (October 2002): 1135-1140. Full Text
  - Pandrea, I, Robertson, DL, Onanga, R, Gao, F, Makuwa, M, Ngari, P, Bedjabaga, I, Roques, P, Simon, F, and Apetrei, C. "Analysis of partial pol and env sequences indicates a high prevalence of HIV type 1 recombinant strains circulating in Gabon." Aids Research and Human Retroviruses 18, no. 15 (October 2002): 1103-1116. Full Text
  - Tang, J, Tang, S, Lobashevsky, E, Myracle, AD, Fideli, U, Aldrovandi, G, Allen, S, Musonda, R, Kaslow, RA, and Zambia-UAB HIV Research Project, . "Favorable and unfavorable HLA class I alleles and haplotypes in Zambians predominantly infected with clade C human immunodeficiency virus type 1." Journal of Virology 76, no. 16 (August 2002): 8276-8284. Full Text
  - Gaschen, B, Taylor, J, Yusim, K, Foley, B, Gao, F, Lang, D, Novitsky, V, Haynes, B, Hahn, BH, Bhattacharya, T, and Korber, B. "Diversity considerations in HIV-1 vaccine selection." Science (New York, N.Y.) 296, no. 5577 (June 2002): 2354-2360. (Review) Full Text
  - Marras, D, Bruggeman, LA, Gao, F, Tanji, N, Mansukhani, MM, Cara, A, Ross, MD, Gusella, GL, Benson, G, D'Agati, VD, Hahn, BH, Klotman, ME, and Klotman, PE. "Replication and compartmentalization of HIV-1 in kidney epithelium of patients with HIV-associated nephropathy." Nature Medicine 8, no. 5 (May 2002): 522-526. Full Text
  - Osmanov, S, Pattou, C, Walker, N, Schwardländer, B, Esparza, J, and WHO-UNAIDS Network for HIV Isolation and Characterization, . "Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000." Journal of Acquired Immune Deficiency Syndromes (1999) 29, no. 2 (February 2002): 184-190. Full Text
  - Agwale, SM, Zeh, C, Robbins, KE, Odama, L, Saekhou, A, Edubio, A, Njoku, M, Sani-Gwarzo, N, Gboun, MS, Gao, F, Reitz, M, Hone, D, Pieniazek, D, Wambebe, C, and Kalish, ML. "Molecular surveillance of HIV-1 field strains in Nigeria in preparation for vaccine trials." Vaccine 20, no. 16 (2002): 2131-2139. Full Text
  - Hoesley, CJ, Allen, SA, Raper, JL, Musonda, R, Niu, Y, Gao, F, Squires, KE, and Aldrovandi, GM. "Comparative analysis of commercial assays for the detection and quantification of human immunodeficiency virus type 1 (HIV-1) RNA in plasma from patients infected with HIV-1 subtype C." Clinical Infectious Diseases 35, no. 3 (2002): 323-325. Full Text
  - Santiago, ML, Rodenburg, CM, Kamenya, S, Bibollet-Ruche, F, Gao, F, Bailes, E, Meleth, S, Soong, S-J, Kilby, JM, Moldoveanu, Z, Fahey, B, Muller, MN, Ayouba, A, Nerrienet, E, McClure, HM, Heeney, JL, Pusey, AE, Collins, DA, Boesch, C, Wrangham, RW, Goodall, J, Sharp, PM, Shaw, GM, and Hahn, BH. "SIVcpz in wild chimpanzees." Science (New York, N.Y.) 295, no. 5554 (January 2002): 465-null. Full Text
  - Trask, SA, Derdeyn, CA, Fideli, U, Chen, Y, Meleth, S, Kasolo, F, Musonda, R, Hunter, E, Gao, F, Allen, S, and Hahn, BH. "Molecular epidemiology of human immunodeficiency virus type 1 transmission in a heterosexual cohort of discordant couples in Zambia." Journal of Virology 76, no. 1 (January 2002): 397-405. Full Text
  - Gao, F, Trask, SA, Hui, H, Mamaeva, O, Chen, Y, Theodore, TS, Foley, BT, Korber, BT, Shaw, GM, and Hahn, BH. "Molecular characterization of a highly divergent HIV type 1 isolate obtained early in the AIDS epidemic from the Democratic Republic of Congo." Aids Research and Human Retroviruses 17, no. 12 (August 2001): 1217-1222. Full Text
  - Souquière, S, Bibollet-Ruche, F, Robertson, DL, Makuwa, M, Apetrei, C, Onanga, R, Kornfeld, C, Plantier, JC, Gao, F, Abernethy, K, White, LJ, Karesh, W, Telfer, P, Wickings, EJ, Mauclère, P, Marx, PA, Barré-Sinoussi, F, Hahn, BH, Müller-Trutwin, MC, and Simon, F. "Wild Mandrillus sphinx are carriers of two types of lentivirus." Journal of Virology 75, no. 15 (August 2001): 7086-7096. Full Text
  - Agwale, SM, Robbins, KE, Odama, L, Saekhou, A, Zeh, C, Edubio, A, Njoku, OM, Sani-Gwarzo, N, Gboun, MF, Gao, F, Reitz, M, Hone, D, Folks, TM, Pieniazek, D, Wambebe, C, and Kalish, ML. "Development of an env gp41-based heteroduplex mobility assay for rapid human immunodeficiency virus type 1 subtyping." Journal of Clinical Microbiology 39, no. 6 (June 2001): 2110-2114. Full Text
  - Gao, F, Vidal, N, Li, Y, Trask, SA, Chen, Y, Kostrikis, LG, Ho, DD, Kim, J, Oh, MD, Choe, K, Salminen, M, Robertson, DL, Shaw, GM, Hahn, BH, and Peeters, M. "Evidence of two distinct subsubtypes within the HIV-1 subtype A radiation." Aids Research and Human Retroviruses 17, no. 8 (May 2001): 675-688. Full Text
  - Mahalingam, S, Van Tine, B, Santiago, ML, Gao, F, Shaw, GM, and Hahn, BH. "Functional analysis of the simian immunodeficiency virus Vpx protein: identification of packaging determinants and a novel nuclear targeting domain." Journal of Virology 75, no. 1 (January 2001): 362-374. Full Text
  - Fonjungo, PN, Mpoudi, EN, Torimiro, JN, Alemnji, GA, Eno, LT, Nkengasong, JN, Gao, F, Rayfield, M, Folks, TM, Pieniazek, D, and Lal, RB. "Presence of diverse human immunodeficiency virus type 1 viral variants in Cameroon." Aids Research and Human Retroviruses 16, no. 13 (September 2000): 1319-1324. Full Text
  - Yang, C, Gao, F, Fonjungo, PN, Zekeng, L, van der Groen, G, Pieniazek, D, Schable, C, and Lal, RB. "Phylogenetic analysis of protease and transmembrane region of HIV type 1 group O." Aids Research and Human Retroviruses 16, no. 11 (July 2000): 1075-1081. Full Text
  - Korber, B, Muldoon, M, Theiler, J, Gao, F, Gupta, R, Lapedes, A, Hahn, BH, Wolinsky, S, and Bhattacharya, T. "Timing the ancestor of the HIV-1 pandemic strains." Science (New York, N.Y.) 288, no. 5472 (June 2000): 1789-1796. Full Text
  - Robertson, DL, Anderson, JP, Bradac, JA, Carr, JK, Foley, B, Funkhouser, RK, Gao, F, Hahn, BH, Kalish, ML, Kuiken, C, Learn, GH, Leitner, T, McCutchan, F, Osmanov, S, Peeters, M, Pieniazek, D, Salminen, M, Sharp, PM, Wolinsky, S, and Korber, B. "HIV-1 nomenclature proposal." Science (New York, N.Y.) 288, no. 5463 (April 2000): 55-56. (Letter) Full Text
  - Sharp, PM, Bailes, E, Gao, F, Beer, BE, Hirsch, VM, and Hahn, BH. "Origins and evolution of AIDS viruses: estimating the time-scale." Biochemical Society Transactions 28, no. 2 (February 2000): 275-282. Full Text
  - Hooper, E, Korber, B, Bhattacharya, T, Theiler, J, Gupta, R, Lapedes, A, Hahn, B, Gao, F, Muldoon, M, Wolinsky, S, and Plotkin, SA. "Search for the origin of HIV and AIDS [2] (multiple letters)." Science 289, no. 5482 (2000): 1140-1141. Full Text
  - Yang, C, Dash, BC, Simon, F, Groen, GVD, Pieniazek, D, Gao, F, Hahn, BH, and Lal, RB. "Detection of diverse variants of human immunodeficiency virus-1 groups M, N, and O and simian immunodeficiency viruses from chimpanzees by using generic pol and env primer pairs." Journal of Infectious Diseases 181, no. 5 (2000): 1791-1795. Full Text
  - Yang, C, Pieniazek, D, Owen, SM, Fridlund, C, Nkengasong, J, Mastro, TD, Rayfield, MA, Downing, R, Biryawaho, B, Tanuri, A, Zekeng, L, van der Groen, G, Gao, F, and Lal, RB. "Detection of phylogenetically diverse human immunodeficiency virus type 1 groups M and O from plasma by using highly sensitive and specific generic primers." Journal of Clinical Microbiology 37, no. 8 (August 1999): 2581-2586.
  - Gao, F, Bailes, E, Robertson, DL, Chen, Y, Rodenburg, CM, Michael, SF, Cummins, LB, Arthur, LO, Peeters, M, Shaw, GM, Sharp, PM, and Hahn, BH. "Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes." Nature 397, no. 6718 (February 1999): 436-441. Full Text
  - Sharp, PM, Bailes, E, Robertson, DL, Gao, F, and Hahn, BH. "Origins and evolution of AIDS viruses." Biological Bulletin 196, no. 3 (1999): 338-342.
  - Gao, F, Robertson, DL, Carruthers, CD, Li, Y, Bailes, E, Kostrikis, LG, Salminen, MO, Bibollet-Ruche, F, Peeters, M, Ho, DD, Shaw, GM, Sharp, PM, and Hahn, BH. "An isolate of human immunodeficiency virus type 1 originally classified as subtype I represents a complex mosaic comprising three different group M subtypes (A, G, and I)." Journal of Virology 72, no. 12 (December 1998): 10234-10241.
  - Gao, F, Robertson, DL, Carruthers, CD, Morrison, SG, Jian, B, Chen, Y, Barré-Sinoussi, F, Girard, M, Srinivasan, A, Abimiku, AG, Shaw, GM, Sharp, PM, and Hahn, BH. "A comprehensive panel of near-full-length clones and reference sequences for non-subtype B isolates of human immunodeficiency virus type 1." Journal of Virology 72, no. 7 (July 1998): 5680-5698.
  - Owen, SM, Ellenberger, D, Rayfield, M, Wiktor, S, Michel, P, Grieco, MH, Gao, F, Hahn, BH, and Lal, RB. "Genetically divergent strains of human immunodeficiency virus type 2 use multiple coreceptors for viral entry." Journal of Virology 72, no. 7 (July 1998): 5425-5432.
  - Connor, RI, Korber, BT, Graham, BS, Hahn, BH, Ho, DD, Walker, BD, Neumann, AU, Vermund, SH, Mestecky, J, Jackson, S, Fenamore, E, Cao, Y, Gao, F, Kalams, S, Kunstman, KJ, McDonald, D, McWilliams, N, Trkola, A, Moore, JP, and Wolinsky, SM. "Immunological and virological analyses of persons infected by human immunodeficiency virus type 1 while participating in trials of recombinant gp120 subunit vaccines." Journal of Virology 72, no. 2 (February 1998): 1552-1576.
  - Georges-Courbot, MC, Lu, CY, Makuwa, M, Telfer, P, Onanga, R, Dubreuil, G, Chen, Z, Smith, SM, Georges, A, Gao, F, Hahn, BH, and Marx, PA. "Natural infection of a household pet red-capped mangabey (Cercocebus torquatus torquatus) with a new simian immunodeficiency virus." Journal of Virology 72, no. 1 (January 1998): 600-608.
  - Betts, MR, Krowka, J, Santamaria, C, Balsamo, K, Gao, F, Mulundu, G, Luo, C, N'Gandu, N, Sheppard, H, Hahn, BH, Allen, S, and Frelinger, JA. "Cross-clade human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte responses in HIV-infected Zambians." Journal of Virology 71, no. 11 (November 1997): 8908-8911.
  - Salminen, MO, Carr, JK, Robertson, DL, Hegerich, P, Gotte, D, Koch, C, Sanders-Buell, E, Gao, F, Sharp, PM, Hahn, BH, Burke, DS, and McCutchan, FE. "Evolution and probable transmission of intersubtype recombinant human immunodeficiency virus type 1 in a Zambian couple." Journal of Virology 71, no. 4 (April 1997): 2647-2655.
  - Wilson, CC, Kalams, SA, Wilkes, BM, Ruhl, DJ, Gao, F, Hahn, BH, Hanson, IC, Luzuriaga, K, Wolinsky, S, Koup, R, Buchbinder, SP, Johnson, RP, and Walker, BD. "Overlapping epitopes in human immunodeficiency virus type 1 gp120 presented by HLA A, B, and C molecules: effects of viral variation on cytotoxic T-lymphocyte recognition." Journal of Virology 71, no. 2 (February 1997): 1256-1264.
  - Gao, F, Robertson, DL, Morrison, SG, Hui, H, Craig, S, Decker, J, Fultz, PN, Girard, M, Shaw, GM, Hahn, BH, and Sharp, PM. "The heterosexual human immunodeficiency virus type 1 epidemic in Thailand is caused by an intersubtype (A/E) recombinant of African origin." Journal of Virology 70, no. 10 (October 1996): 7013-7029.
  - Gao, F, Morrison, SG, Robertson, DL, Thornton, CL, Craig, S, Karlsson, G, Sodroski, J, Morgado, M, Galvao-Castro, B, von Briesen, H, Beddows, S, Weber, J, Sharp, PM, Shaw, GM, and Hahn, BH. "Molecular cloning and analysis of functional envelope genes from human immunodeficiency virus type 1 sequence subtypes A through G. The WHO and NIAID Networks for HIV Isolation and Characterization." Journal of Virology 70, no. 3 (March 1996): 1651-1667.
  - Karlsson, GB, Gao, F, Robinson, J, Hahn, B, and Sodroski, J. "Increased envelope spike density and stability are not required for the neutralization resistance of primary human immunodeficiency viruses." Journal of Virology 70, no. 9 (1996): 6136-6142.
  - Sharp, PM, Robertson, DL, Gao, F, and Hahn, BH. "Origins and diversity of human immunodeficiency viruses." Aids 8, no. SUPPL. 1 (December 1, 1994).
  - Gao, F, Yue, L, Craig, S, Thornton, CL, Robertson, DL, McCutchan, FE, Bradac, JA, Sharp, PM, and Hahn, BH. "Genetic variation of HIV type 1 in four World Health Organization-sponsored vaccine evaluation sites: generation of functional envelope (glycoprotein 160) clones representative of sequence subtypes A, B, C, and E. WHO Network for HIV Isolation and Characterization." Aids Research and Human Retroviruses 10, no. 11 (November 1994): 1359-1368. Full Text
  - Gao, F, Yue, L, Robertson, DL, Hill, SC, Hui, H, Biggar, RJ, Neequaye, AE, Whelan, TM, Ho, DD, and Shaw, GM. "Genetic diversity of human immunodeficiency virus type 2: evidence for distinct sequence subtypes with differences in virus biology." Journal of Virology 68, no. 11 (November 1994): 7433-7447.
  - Gao, F, Yue, L, Hill, SC, Robertson, DL, Graves, AH, Saag, MS, Shaw, GM, Sharp, PM, and Hahn, BH. "HIV-1 sequence subtype D in the United States." Aids Research and Human Retroviruses 10, no. 5 (May 1994): 625-627. Full Text
  - Gao, F, Yue, L, Sharp, PM, and Hahn, BH. "Genetic typing of HIV-2 from a Senegalese/German heterosexual transmission." AIDS research and human retroviruses 9, no. 7 (July 1993): 703-704. Full Text
  - Gao, F. "Origin of HIV-2 in West Africa." Biomedicine and Pharmacotherapy 47, no. 2-3 (January 1, 1993): 111-null. Full Text
  - Mulligan, MJ, Yamshchikov, GV, Ritter, GD, Gao, F, Jin, MJ, Nail, CD, Spies, CP, Hahn, BH, and Compans, RW. "Cytoplasmic domain truncation enhances fusion activity by the exterior glycoprotein complex of human immunodeficiency virus type 2 in selected cell types." Journal of Virology 66, no. 6 (June 1992): 3971-3975.
  - Gao, F, Yue, L, White, AT, Pappas, PG, Barchue, J, Hanson, AP, Greene, BM, Sharp, PM, Shaw, GM, and Hahn, BH. "Human infection by genetically diverse SIV_SM-related HIV-2 in West Africa." Nature 358, no. 6386 (1992): 495-499.
- Other Articles
  - Rodenburg, CM, Li, Y, Trask, SA, Chen, Y, Decker, J, Robertson, DL, Kalish, ML, Shaw, GM, Allen, S, Hahn, BH, Gao, F, and UNAIDS and NIAID Networks for HIV Isolation and Characterization, . "Near full-length clones and reference sequences for subtype C isolates of HIV type 1 from three different continents." Aids Research and Human Retroviruses 17, no. 2 (January 2001): 161-168. Full Text
- Conference Papers
  - Hompe, ED, Kumar, A, Giorgi, EE, McGuire, E, Fouda, GG, Gao, F, and Permar, SR. "Induction of Neutralizing Antibodies Against Autologous Viruses in HIV-1 Infected Pregnant Women Immunized With a gp120/160 Vaccine." HIV Research for Prevention Meeting (HIVR4P) - AIDS Vaccine, Microbicide and ARV-Based Prevention Science. Madrid, SPAIN. October 21, 2018 - October 25, 2018.: MARY ANN LIEBERT, INC, October 1, 2018. Link to Item
  - Martinez, DR, Martinez, D, Mangan, RJ, Georgi, E, Chen, J, Mengual, M, Mangold, J, Heimsath, H, Eudailey, JA, Hernandez, G, Morgan-Asiedu, PK, Wiehe, K, Gao, F, and Permar, SR. "Characterizing Env-specific Monoclonal Antibodies Isolated From US and Malawian HIV-infected Non-transmitting and Transmitting Women." HIV Research for Prevention Meeting (HIVR4P) - AIDS Vaccine, Microbicide and ARV-Based Prevention Science. Madrid, SPAIN. October 21, 2018 - October 25, 2018.: MARY ANN LIEBERT, INC, October 1, 2018. Link to Item
  - Smith, CEP, Eudailey, J, Kumar, A, Stamper, L, Giorgi, E, Fouda, G, Mcguire, E, Gao, F, and Permar, S. "Infant Peripartum Transmitted-founder HIV-1 Variants are Resistant to Autologous Maternal Plasma Neutralization." October 2016. Link to Item
  - Wang, C, Jiang, C, Gao, N, Zhang, K, Liu, D, Wang, W, Cong, Z, Qin, C, Ganusov, VV, Kong, W, Yu, X, and Gao, F. "Partial Protection from Intravenous Challenge by an Integration-defective SIV Vaccine." October 2016. Link to Item
  - Hora, B, Gulzar, N, Chen, Y, Cai, F, Su, C, Karagiannis, K, Smith, K, Simonyan, V, Shah, SA, Ahmed, M, Sanchez, AM, Stone, M, Cohen, MS, Haynes, BF, Busch, MP, Mazumder, R, Denny, TN, and Gao, F. "Streamlined quasispecies and subtype analysis of HIV-1 sequences generated by high-throughput sequencing using the high-performance integrated virtual environment (HIVE)." July 2016. Open Access Copy Link to Item
  - Gao, F, Bonsignori, M, Liao, H, Kumar, A, Xia, S, Cai, F, Lu, X, Kozink, DM, Kwong, P, Zhou, T, Lynch, R, Alam, SM, Ferrari, G, Kelsoe, G, Sandrasegaram, G, Shaw, GM, Hahn, BH, Montefiori, DC, Kamanga, G, Cohen, M, Braber, P, Korber, BT, Mascola, JR, Kepler, TB, and Haynes, BF. "Multiple Pathways of HIV-1 Autologous Neutralizing Antibodies Cooperate to Drive CD4 Binding Site Broadly Neutralizing Antibody Responses." November 1, 2013. Link to Item
  - Zhang, R, Moody, M, Alam, M, Yu, J, Santra, S, Kelsoe, G, Sekaran, S, Bhaskarabhatla, R, Wang, M, Gurley, T, Allen, A, Armand, L, Marshall, D, Whitesides, J, Sutherland, L, Scearce, R, Foulger, A, Cooper, M, Pritchett, J, Hogan, A, De, R, Stolarchuk, C, Solomom, E, Friberg, E, Yang, Y, Gao, F, Schmitz, J, Kepler, T, Haynes, B, and Liao, H. "Isolation of mAbs from Sorted Single B Cells by RT/PCR for Analysis of B Cell Responses to HIV-1 MPER Epitope in Vaccinated Rhesus Macaques." November 1, 2013. Link to Item
  - Bar, KJ, Decker, JM, Ganusov, VV, Li, H, McLellan, JS, Yang, Y, Pavlicek, JW, Keele, BF, Gao, F, Perelson, AS, Kwong, PD, Hahn, BH, and Shaw, GM. "Molecular targets and potency of HIV-1 neutralization revealed by dynamic assessment of transmitted/founder virus antibody recognition and escape." October 2010. Link to Item
  - Chen, Y, Yang, H, Zhang, T, Huang, X, Xu, X, Korber, B, Montefiori, D, Gao, F, and Wu, H. "Limited introductions and genetic variation of HIV-1 in a MSM cohort in China." October 2010. Link to Item
  - Pavlicek, JW, Kirchherr, JL, Hopper, J, Chen, S, Keele, BF, Li, H, Liu, MK, Goonetilleke, N, Kamanga, G, McMichael, A, Hahn, B, Haynes, B, and Gao, F. "Evolution of the Same HIV-1 Transmitted/Founder Virus in Two Hosts." October 2010. Link to Item
  - Gnanakaran, G, Bhattacharya, T, Daniels, M, Lapedes, A, Gao, F, Kumar, A, Li, M, Tang, H, Greene, K, Gao, H, Seaman, M, Haynes, BF, Montefiori, DC, and Korber, BT. "P04-54 LB. Genetic signature analysis identifies the CD4i region of gp120 as a determinant of broadly NAb responses in HIV-1-infected individuals." October 22, 2009. Full Text
  - Liao, L, Chen, X, Dixon, A, Munshaw, S, Moody, M, Zhang, R, Nagel, A, Foulger, A, Derosa, K, Parks, R, Mcparland, M, Whitesides, J, Marshall, D, Amos, J, Yang, Y, Gao, F, Shea, T, Margolis, D, Shaw, G, Markowitz, M, Denny, T, Kelsoe, G, Tomaras, G, Kepler, T, and Haynes, B. "P04-45. Characterization of the plasma cell repertoire in acute HIV-1 infection (AHI)." October 22, 2009. Full Text
  - Munshaw, S, Liao, H, Dixon, A, Chen, X, Nagel, A, Derosa, K, Parks, R, Amos, J, Whitesides, JF, Marshalls, DJ, Yang, Y, Gao, F, Tomaras, GD, Moody, MA, Kelsoe, GH, Shea, TC, Margolis, DM, Markowitz, M, Goepfert, P, Shaw, G, Haynes, BF, and Kepler, TB. "S021-04 OA. A large-scale analysis of immunoglobulin sequences derived from plasmablasts/plasma cells in acute HIV-1 infection subjects." October 22, 2009. Full Text
  - Shen, X, Dennison, M, Gao, F, Montefiori, DC, Verkoczy, L, Haynes, B, Alam, M, and Tomaras, G. "OA021-04. HIV-1 gp41 envelope MPER mutation altered epitope conformation in lipid and increased sensitivity to 2F5 and 4E10 neutralizing antibodies." October 22, 2009. Full Text
  - Gnanakaran, G, Bhattacharya, T, Daniels, M, Lapedes, A, Gao, F, Kumar, A, Li, M, Tang, H, Greene, K, Gao, H, Seaman, M, Haynes, BF, Montefiori, DC, and Korber, BT. "P04-54 LB. Genetic signature analysis identifies the CD4i region of gp120 as a determinant of broadly NAb responses in HIV-1-infected individuals." : Springer Nature, October 2009. Full Text
  - Liao, L, Chen, X, Dixon, A, Munshaw, S, Moody, M, Zhang, R, Nagel, A, Foulger, A, Derosa, K, Parks, R, Mcparland, M, Whitesides, J, Marshall, D, Amos, J, Yang, Y, Gao, F, Shea, T, Margolis, D, Shaw, G, Markowitz, M, Denny, T, Kelsoe, G, Tomaras, G, Kepler, T, and Haynes, B. "P04-45. Characterization of the plasma cell repertoire in acute HIV-1 infection (AHI)." : Springer Nature, October 2009. Full Text
  - Munshaw, S, Liao, H, Dixon, A, Chen, X, Nagel, A, Derosa, K, Parks, R, Amos, J, Whitesides, JF, Marshalls, DJ, Yang, Y, Gao, F, Tomaras, GD, Moody, MA, Kelsoe, GH, Shea, TC, Margolis, DM, Markowitz, M, Goepfert, P, Shaw, G, Haynes, BF, and Kepler, TB. "S021-04 OA. A large-scale analysis of immunoglobulin sequences derived from plasmablasts/plasma cells in acute HIV-1 infection subjects." : Springer Nature, October 2009. Full Text
  - Shen, X, Dennison, M, Gao, F, Montefiori, DC, Verkoczy, L, Haynes, B, Alam, M, and Tomaras, G. "OA021-04. HIV-1 gp41 envelope MPER mutation altered epitope conformation in lipid and increased sensitivity to 2F5 and 4E10 neutralizing antibodies." : Springer Nature, October 2009. Full Text
  - Jiang, C, Chen, S, Eron, J, Menezes, P, Montefiori, D, Haynes, B, and Gao, F. "Functional Comparison of HIV-1 env Gene Quasispecies Populations from Acutely and Chronically Infected Individuals." October 2008. Link to Item
  - Kirchherr, JL, Hamilton, J, Lu, X, Kasongo, W, Chalwe, V, Mwanayanda, L, Musonda, RM, Korber, BT, Muldoon, M, Montefiori, D, Haynes, BF, and Gao, F. "Functional Analysis of the Quasispecies env Population in Individuals Infected with HIV-1 Subtype C Viruses." October 2008. Link to Item

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