Skip to main content

James P Herrera

Adjunct Professor of Global Health
Duke Global Health Institute

Selected Publications


Evaluating the Efficacy of Agricultural Interventions in Northeast Madagascar

Journal Article Sustainability Switzerland · December 1, 2025 Regenerative agroecology promotes a suite of methods that diversify farmers’ techniques, crops, and income-generating opportunities. Many low- and middle-income countries struggle with food insecurity, malnutrition, and poverty, relying on natural resource ... Full text Cite

Effect of Land-Use on Hantavirus Infection Among Introduced and Endemic Small Mammals of Madagascar.

Journal Article Ecology and evolution · April 2025 Hantaviruses are globally distributed zoonotic pathogens capable of causing fatal disease in humans. Addressing the risk of hantavirus spillover from animal reservoirs to humans requires identifying the local reservoirs (usually rodents and other small mam ... Full text Cite

Functional Traits and Phylogenetic Effects Drive Germination of Lemur-Passed Seeds.

Journal Article Ecology and evolution · February 2025 Frugivore-mediated seed dispersal drives ecological functioning across tropical forests. The biological mechanisms affecting seed dispersal outcomes, as well as the role of specific functional traits in plants and their dispersers, is still not well unders ... Full text Cite

Astroviruses in terrestrial Malagasy mammals.

Journal Article PLoS neglected tropical diseases · June 2024 Small terrestrial mammals are major hosts of infectious agents responsible for zoonotic diseases. Astroviruses (AstVs)-the cause of non-bacterial gastroenteritis mainly affecting young children-have been detected in a wide array of mammalian and avian host ... Full text Cite

A habitat stronghold on the precipice: A call-to-action for supporting lemur conservation in northeast Madagascar.

Journal Article American journal of primatology · March 2024 The northeast of Madagascar is as diverse as it is threatened. The area bordering the Analanjirofo and SAVA regions contains six protected areas and at least 22 lemur species. Many applied research and conservation programs have been established in the reg ... Full text Cite

Predicting primate-parasite associations using exponential random graph models.

Journal Article The Journal of animal ecology · March 2023 Ecological associations between hosts and parasites are influenced by host exposure and susceptibility to parasites, and by parasite traits, such as transmission mode. Advances in network analysis allow us to answer questions about the causes and consequen ... Full text Cite

Drivers and consequences of structure in plant-lemur ecological networks.

Journal Article The Journal of animal ecology · October 2022 Species interactions shape the diversity and resilience of ecological networks. Plant and animal traits, as well as phylogeny, affect interaction likelihood, driving variation in network structure and tolerance to disturbance. We investigated how traits an ... Full text Cite

Comparing transmission potential networks based on social network surveys, close contacts and environmental overlap in rural Madagascar.

Journal Article Journal of the Royal Society, Interface · January 2022 Social and spatial network analysis is an important approach for investigating infectious disease transmission, especially for pathogens transmitted directly between individuals or via environmental reservoirs. Given the diversity of ways to construct netw ... Full text Open Access Cite

Predictions of primate-parasite coextinction.

Journal Article Philosophical transactions of the Royal Society of London. Series B, Biological sciences · November 2021 Future biodiversity loss threatens the integrity of complex ecological associations, including among hosts and parasites. Almost half of primate species are threatened with extinction, and the loss of threatened hosts could negatively impact parasite assoc ... Full text Open Access Cite

Food insecurity related to agricultural practices and household characteristics in rural communities of northeast Madagascar.

Journal Article Food security · January 2021 Ending hunger and alleviating poverty are key goals for a sustainable future. Food security is a constant challenge for agrarian communities in low-income countries, especially in Madagascar. We investigated agricultural practices, household characteristic ... Full text Open Access Cite

Effects of land use, habitat characteristics, and small mammal community composition on Leptospira prevalence in northeast Madagascar.

Journal Article PLoS neglected tropical diseases · December 2020 Human activities can increase or decrease risks of acquiring a zoonotic disease, notably by affecting the composition and abundance of hosts. This study investigated the links between land use and infectious disease risk in northeast Madagascar, where huma ... Full text Open Access Cite

Convergent evolution in lemur environmental niches

Journal Article Journal of Biogeography · April 1, 2020 Aim: To test the hypothesis that adaptive convergent evolution of climate niches occurred in multiple independent lemur lineages. Location: Madagascar. Taxon: Lemurs. Methods: I collected climate and altitude data from WorldClim and summarized the niches o ... Full text Open Access Cite

Behavioural ecology and infectious disease: implications for conservation of biodiversity.

Journal Article Philosophical transactions of the Royal Society of London. Series B, Biological sciences · September 2019 Behaviour underpins interactions among conspecifics and between species, with consequences for the transmission of disease-causing parasites. Because many parasites lead to declines in population size and increased risk of extinction for threatened species ... Full text Open Access Cite

The changing ecology of primate parasites: Insights from wild-captive comparisons.

Journal Article American journal of primatology · July 2019 Host movements, including migrations or range expansions, are known to influence parasite communities. Transitions to captivity-a rarely studied yet widespread human-driven host movement-can also change parasite communities, in some cases leading to pathog ... Full text Open Access Cite

Estimating the population size of lemurs based on their mutualistic food trees

Journal Article Journal of Biogeography · November 1, 2018 Aim: Species’ distributions and abundances are primarily determined by the suitability of environmental conditions, including climate and interactions with sympatric species, but also increasingly by human activities. Modelling tools can help in assessing ... Full text Open Access Cite

Primate diversification inferred from phylogenies and fossils.

Journal Article Evolution; international journal of organic evolution · December 2017 Biodiversity arises from the balance between speciation and extinction. Fossils record the origins and disappearance of organisms, and the branching patterns of molecular phylogenies allow estimation of speciation and extinction rates, but the patterns of ... Full text Open Access Cite

The Effects of Biogeography and Biotic Interactions on Lemur Community Assembly

Journal Article International Journal of Primatology · August 1, 2017 Geographic patterns of biodiversity result from broad-scale biogeographic and present-day ecological processes. The aim of this study was to investigate the relative importance of biogeographic history and ecology driving patterns of diversity in modern pr ... Full text Open Access Cite

Prioritizing protected areas in Madagascar for lemur diversity using a multidimensional perspective

Journal Article Biological Conservation · March 1, 2017 Biodiversity is affected by anthropogenic activities, with a trend of decreasing species richness with habitat degradation. Decreasing species richness erodes evolutionary history and ecosystem function, but taxonomic, phylogenetic and functional diversity ... Full text Open Access Cite

Testing the adaptive radiation hypothesis for the lemurs of Madagascar.

Journal Article Royal Society open science · January 2017 Lemurs, the diverse, endemic primates of Madagascar, are thought to represent a classic example of adaptive radiation. Based on the most complete phylogeny of living and extinct lemurs yet assembled, I tested predictions of adaptive radiation theory by est ... Full text Open Access Cite

Phylogeny and Divergence Times of Lemurs Inferred with Recent and Ancient Fossils in the Tree.

Journal Article Systematic biology · September 2016 Paleontological and neontological systematics seek to answer evolutionary questions with different data sets. Phylogenies inferred for combined extant and extinct taxa provide novel insights into the evolutionary history of life. Primates have an extensive ... Full text Cite

Interactions between plants and primates shape community diversity in a rainforest in Madagascar.

Journal Article The Journal of animal ecology · July 2016 Models of ecological community assembly predict how communities of interacting organisms may be shaped by abiotic and biotic factors. Competition and environmental filtering are the predominant factors hypothesized to explain community assembly. This study ... Full text Cite

The Effects of Habitat Disturbance on Lemurs at Ranomafana National Park, Madagascar

Journal Article International Journal of Primatology · October 2011 Full text Cite