Research Interests
- Uncertainty quantification for deep learning models
- Conformal prediction
- Biologically structured neural networks
- Large language models for genomics
- Cell state embedding models
- Probabilistic machine learning
- Bayesian inference in probabilistic graphical models
- Structured prediction
- Interpretation/prioritization of genetic variants in disease
- RNA splicing
- Gene regulation
- Single-cell CRISPR screens
- Computational linguistics - formal grammars and parsing