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A rapid and affordable screening platform for membrane protein trafficking.

Publication ,  Journal Article
Snyder, JC; Pack, TF; Rochelle, LK; Chakraborty, SK; Zhang, M; Eaton, AW; Bai, Y; Ernst, LA; Barak, LS; Waggoner, AS; Caron, MG
Published in: BMC Biol
December 17, 2015

BACKGROUND: Membrane proteins regulate a diversity of physiological processes and are the most successful class of targets in drug discovery. However, the number of targets adequately explored in chemical space and the limited resources available for screening are significant problems shared by drug-discovery centers and small laboratories. Therefore, a low-cost and universally applicable screen for membrane protein trafficking was developed. RESULTS: This high-throughput screen (HTS), termed IRFAP-HTS, utilizes the recently described MarsCy1-fluorogen activating protein and the near-infrared and membrane impermeant fluorogen SCi1. The cell surface expression of MarsCy1 epitope-tagged receptors can be visualized by simple addition of SCi1. User-friendly, rapid, and quantitative detection occurs on a standard infrared western-blotting scanner. The reliability and robustness of IRFAP-HTS was validated by confirming human vasopressin-2 receptor and dopamine receptor-2 trafficking in response to agonist or antagonist. The IRFAP-HTS screen was deployed against the leucine-rich G protein-coupled receptor-5 (Lgr5). Lgr5 is expressed in stem cells, modulates Wnt/ß-catenin signaling, and is therefore a promising drug target. However, small molecule modulators have yet to be reported. The constitutive internalization of Lgr5 appears to be one primary mode through which its function is regulated. Therefore, IRFAP-HTS was utilized to screen 11,258 FDA-approved and drug-like small molecules for those that antagonize Lgr5 internalization. Glucocorticoids were found to potently increase Lgr5 expression at the plasma membrane. CONCLUSION: The IRFAP-HTS platform provides a versatile solution for screening more targets with fewer resources. Using only a standard western-blotting scanner, we were able to screen 5,000 compounds per hour in a robust and quantitative assay. Multi-purposing standardly available laboratory equipment eliminates the need for idiosyncratic and more expensive high-content imaging systems. The modular and user-friendly IRFAP-HTS is a significant departure from current screening platforms. Small laboratories will have unprecedented access to a robust and reliable screening platform and will no longer be limited by the esoteric nature of assay development, data acquisition, and post-screening analysis. The discovery of glucocorticoids as modulators for Lgr5 trafficking confirms that IRFAP-HTS can accelerate drug-discovery and drug-repurposing for even the most obscure targets.

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Published In

BMC Biol

DOI

EISSN

1741-7007

Publication Date

December 17, 2015

Volume

13

Start / End Page

107

Location

England

Related Subject Headings

  • Reproducibility of Results
  • Protein Transport
  • Membrane Proteins
  • Humans
  • High-Throughput Screening Assays
  • HEK293 Cells
  • Drug Discovery
  • Developmental Biology
  • 31 Biological sciences
  • 06 Biological Sciences
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Snyder, J. C., Pack, T. F., Rochelle, L. K., Chakraborty, S. K., Zhang, M., Eaton, A. W., … Caron, M. G. (2015). A rapid and affordable screening platform for membrane protein trafficking. BMC Biol, 13, 107. https://doi.org/10.1186/s12915-015-0216-3
Snyder, Joshua C., Thomas F. Pack, Lauren K. Rochelle, Subhasish K. Chakraborty, Ming Zhang, Andrew W. Eaton, Yushi Bai, et al. “A rapid and affordable screening platform for membrane protein trafficking.BMC Biol 13 (December 17, 2015): 107. https://doi.org/10.1186/s12915-015-0216-3.
Snyder JC, Pack TF, Rochelle LK, Chakraborty SK, Zhang M, Eaton AW, et al. A rapid and affordable screening platform for membrane protein trafficking. BMC Biol. 2015 Dec 17;13:107.
Snyder, Joshua C., et al. “A rapid and affordable screening platform for membrane protein trafficking.BMC Biol, vol. 13, Dec. 2015, p. 107. Pubmed, doi:10.1186/s12915-015-0216-3.
Snyder JC, Pack TF, Rochelle LK, Chakraborty SK, Zhang M, Eaton AW, Bai Y, Ernst LA, Barak LS, Waggoner AS, Caron MG. A rapid and affordable screening platform for membrane protein trafficking. BMC Biol. 2015 Dec 17;13:107.
Journal cover image

Published In

BMC Biol

DOI

EISSN

1741-7007

Publication Date

December 17, 2015

Volume

13

Start / End Page

107

Location

England

Related Subject Headings

  • Reproducibility of Results
  • Protein Transport
  • Membrane Proteins
  • Humans
  • High-Throughput Screening Assays
  • HEK293 Cells
  • Drug Discovery
  • Developmental Biology
  • 31 Biological sciences
  • 06 Biological Sciences