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Assessing potential functionality of catechol-O-methyltransferase (COMT) polymorphisms associated with pain sensitivity and temporomandibular joint disorders.

Publication ,  Journal Article
Nackley, AG; Diatchenko, L
Published in: Methods Mol Biol
2010

Catechol-O-methyltransferase (COMT) is an enzyme that plays a key role in the modulation of catechol-dependent functions such as cognition, cardiovascular function, and pain processing. Recently, our group demonstrated that three common haplotypes of the human COMT gene, divergent in two synonymous and one nonsynonymous position, are associated with experimental pain sensitivity and onset of temporomandibular joint disorder. In order to determine the functional mechanisms whereby these haplotypes contribute to pain processing, a series of in vitro experiments were performed. Haplotypes divergent in synonymous changes exhibited the largest difference in COMT enzymatic activity because of reduced amount of translated protein. The major COMT haplotypes varied significantly with respect to mRNA local stem-loop structures such that the most stable structure was associated with the lowest protein levels and enzymatic activity. Site-directed mutagenesis that eliminated the stable structure restored the amount of translated protein. These data provide the first demonstration that combinations of commonly observed alleles in the coding region of the human COMT gene can significantly affect the secondary structure of corresponding mRNA transcripts, which in turn leads to dramatic alterations in the translation efficiency of enzyme crucial for a variety of essential functions. The protocols applied to the study of these molecular genetic mechanisms are detailed herein.

Duke Scholars

Published In

Methods Mol Biol

DOI

EISSN

1940-6029

Publication Date

2010

Volume

617

Start / End Page

375 / 393

Location

United States

Related Subject Headings

  • Temporomandibular Joint Disorders
  • RNA, Messenger
  • Polymorphism, Genetic
  • Pain Threshold
  • Pain
  • Nucleic Acid Conformation
  • Humans
  • Haplotypes
  • Developmental Biology
  • Cell Line
 

Citation

APA
Chicago
ICMJE
MLA
NLM

Published In

Methods Mol Biol

DOI

EISSN

1940-6029

Publication Date

2010

Volume

617

Start / End Page

375 / 393

Location

United States

Related Subject Headings

  • Temporomandibular Joint Disorders
  • RNA, Messenger
  • Polymorphism, Genetic
  • Pain Threshold
  • Pain
  • Nucleic Acid Conformation
  • Humans
  • Haplotypes
  • Developmental Biology
  • Cell Line