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Antibiotics as a selective driver for conjugation dynamics.

Publication ,  Journal Article
Lopatkin, AJ; Huang, S; Smith, RP; Srimani, JK; Sysoeva, TA; Bewick, S; Karig, DK; You, L
Published in: Nature microbiology
April 2016

It is generally assumed that antibiotics can promote horizontal gene transfer. However, because of a variety of confounding factors that complicate the interpretation of previous studies, the mechanisms by which antibiotics modulate horizontal gene transfer remain poorly understood. In particular, it is unclear whether antibiotics directly regulate the efficiency of horizontal gene transfer, serve as a selection force to modulate population dynamics after such gene transfer has occurred, or both. Here, we address this question by quantifying conjugation dynamics in the presence and absence of antibiotic-mediated selection. Surprisingly, we find that sublethal concentrations of antibiotics from the most widely used classes do not significantly increase the conjugation efficiency. Instead, our modelling and experimental results demonstrate that conjugation dynamics are dictated by antibiotic-mediated selection, which can both promote and suppress conjugation dynamics. Our findings suggest that the contribution of antibiotics to the promotion of horizontal gene transfer may have been overestimated. These findings have implications for designing effective antibiotic treatment protocols and for assessing the risks of antibiotic use.

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Published In

Nature microbiology

DOI

EISSN

2058-5276

ISSN

2058-5276

Publication Date

April 2016

Volume

1

Issue

6

Start / End Page

16044

Related Subject Headings

  • Selection, Genetic
  • Plasmids
  • Molecular Dynamics Simulation
  • Models, Biological
  • Microfluidic Analytical Techniques
  • Microbial Sensitivity Tests
  • Humans
  • Escherichia coli
  • Drug Resistance, Bacterial
  • Conjugation, Genetic
 

Citation

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Lopatkin, A. J., Huang, S., Smith, R. P., Srimani, J. K., Sysoeva, T. A., Bewick, S., … You, L. (2016). Antibiotics as a selective driver for conjugation dynamics. Nature Microbiology, 1(6), 16044. https://doi.org/10.1038/nmicrobiol.2016.44
Lopatkin, Allison J., Shuqiang Huang, Robert P. Smith, Jaydeep K. Srimani, Tatyana A. Sysoeva, Sharon Bewick, David K. Karig, and Lingchong You. “Antibiotics as a selective driver for conjugation dynamics.Nature Microbiology 1, no. 6 (April 2016): 16044. https://doi.org/10.1038/nmicrobiol.2016.44.
Lopatkin AJ, Huang S, Smith RP, Srimani JK, Sysoeva TA, Bewick S, et al. Antibiotics as a selective driver for conjugation dynamics. Nature microbiology. 2016 Apr;1(6):16044.
Lopatkin, Allison J., et al. “Antibiotics as a selective driver for conjugation dynamics.Nature Microbiology, vol. 1, no. 6, Apr. 2016, p. 16044. Epmc, doi:10.1038/nmicrobiol.2016.44.
Lopatkin AJ, Huang S, Smith RP, Srimani JK, Sysoeva TA, Bewick S, Karig DK, You L. Antibiotics as a selective driver for conjugation dynamics. Nature microbiology. 2016 Apr;1(6):16044.

Published In

Nature microbiology

DOI

EISSN

2058-5276

ISSN

2058-5276

Publication Date

April 2016

Volume

1

Issue

6

Start / End Page

16044

Related Subject Headings

  • Selection, Genetic
  • Plasmids
  • Molecular Dynamics Simulation
  • Models, Biological
  • Microfluidic Analytical Techniques
  • Microbial Sensitivity Tests
  • Humans
  • Escherichia coli
  • Drug Resistance, Bacterial
  • Conjugation, Genetic