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Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD.

Publication ,  Journal Article
Hirano, Y; Nakagawa, M; Suyama, T; Murase, K; Shirakawa, M; Takayama, S; Sun, T-P; Hakoshima, T
Published in: Nature plants
February 2017

The plant-specific GAI, RGA and SCR (GRAS) family proteins play critical roles in plant development and signalling. Two GRAS proteins, SHORT-ROOT (SHR) and SCARECROW (SCR), cooperatively direct asymmetric cell division and the patterning of root cell types by transcriptional control in conjunction with BIRD/INDETERMINATE DOMAIN (IDD) transcription factors, although precise details of these specific interactions and actions remain unknown. Here, we present the crystal structures of the SHR-SCR binary and JACKDAW (JKD)/IDD10-SHR-SCR ternary complexes. Each GRAS domain comprises one α/β core subdomain with an α-helical cap that mediates heterodimerization by forming an intermolecular helix bundle. The α/β core subdomain of SHR forms the BIRD binding groove, which specifically recognizes the zinc fingers of JKD. We identified a conserved SHR-binding motif in 13 BIRD/IDD transcription factors. Our results establish a structural basis for GRAS-GRAS and GRAS-BIRD interactions and provide valuable clues towards our understanding of these regulators, which are involved in plant-specific signalling networks.

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Published In

Nature plants

DOI

EISSN

2055-0278

ISSN

2055-0278

Publication Date

February 2017

Volume

3

Start / End Page

17010

Related Subject Headings

  • Transcription Factors
  • Carrier Proteins
  • Arabidopsis Proteins
  • Arabidopsis
  • 3108 Plant biology
  • 3103 Ecology
 

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Hirano, Y., Nakagawa, M., Suyama, T., Murase, K., Shirakawa, M., Takayama, S., … Hakoshima, T. (2017). Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD. Nature Plants, 3, 17010. https://doi.org/10.1038/nplants.2017.10
Hirano, Yoshinori, Masahiro Nakagawa, Tomoe Suyama, Kohji Murase, Maya Shirakawa, Seiji Takayama, Tai-Ping Sun, and Toshio Hakoshima. “Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD.Nature Plants 3 (February 2017): 17010. https://doi.org/10.1038/nplants.2017.10.
Hirano Y, Nakagawa M, Suyama T, Murase K, Shirakawa M, Takayama S, et al. Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD. Nature plants. 2017 Feb;3:17010.
Hirano, Yoshinori, et al. “Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD.Nature Plants, vol. 3, Feb. 2017, p. 17010. Epmc, doi:10.1038/nplants.2017.10.
Hirano Y, Nakagawa M, Suyama T, Murase K, Shirakawa M, Takayama S, Sun T-P, Hakoshima T. Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD. Nature plants. 2017 Feb;3:17010.

Published In

Nature plants

DOI

EISSN

2055-0278

ISSN

2055-0278

Publication Date

February 2017

Volume

3

Start / End Page

17010

Related Subject Headings

  • Transcription Factors
  • Carrier Proteins
  • Arabidopsis Proteins
  • Arabidopsis
  • 3108 Plant biology
  • 3103 Ecology