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The genome of the green anole lizard and a comparative analysis with birds and mammals.

Publication ,  Journal Article
Alföldi, J; Di Palma, F; Grabherr, M; Williams, C; Kong, L; Mauceli, E; Russell, P; Lowe, CB; Glor, RE; Jaffe, JD; Ray, DA; Boissinot, S ...
Published in: Nature
August 31, 2011

The evolution of the amniotic egg was one of the great evolutionary innovations in the history of life, freeing vertebrates from an obligatory connection to water and thus permitting the conquest of terrestrial environments. Among amniotes, genome sequences are available for mammals and birds, but not for non-avian reptiles. Here we report the genome sequence of the North American green anole lizard, Anolis carolinensis. We find that A. carolinensis microchromosomes are highly syntenic with chicken microchromosomes, yet do not exhibit the high GC and low repeat content that are characteristic of avian microchromosomes. Also, A. carolinensis mobile elements are very young and diverse-more so than in any other sequenced amniote genome. The GC content of this lizard genome is also unusual in its homogeneity, unlike the regionally variable GC content found in mammals and birds. We describe and assign sequence to the previously unknown A. carolinensis X chromosome. Comparative gene analysis shows that amniote egg proteins have evolved significantly more rapidly than other proteins. An anole phylogeny resolves basal branches to illuminate the history of their repeated adaptive radiations.

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Published In

Nature

DOI

EISSN

1476-4687

Publication Date

August 31, 2011

Volume

477

Issue

7366

Start / End Page

587 / 591

Location

England

Related Subject Headings

  • X Chromosome
  • Synteny
  • Phylogeny
  • Molecular Sequence Data
  • Mammals
  • Lizards
  • Humans
  • Genomics
  • Genome
  • General Science & Technology
 

Citation

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Alföldi, J., Di Palma, F., Grabherr, M., Williams, C., Kong, L., Mauceli, E., … Lindblad-Toh, K. (2011). The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature, 477(7366), 587–591. https://doi.org/10.1038/nature10390
Alföldi, Jessica, Federica Di Palma, Manfred Grabherr, Christina Williams, Lesheng Kong, Evan Mauceli, Pamela Russell, et al. “The genome of the green anole lizard and a comparative analysis with birds and mammals.Nature 477, no. 7366 (August 31, 2011): 587–91. https://doi.org/10.1038/nature10390.
Alföldi J, Di Palma F, Grabherr M, Williams C, Kong L, Mauceli E, et al. The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature. 2011 Aug 31;477(7366):587–91.
Alföldi, Jessica, et al. “The genome of the green anole lizard and a comparative analysis with birds and mammals.Nature, vol. 477, no. 7366, Aug. 2011, pp. 587–91. Pubmed, doi:10.1038/nature10390.
Alföldi J, Di Palma F, Grabherr M, Williams C, Kong L, Mauceli E, Russell P, Lowe CB, Glor RE, Jaffe JD, Ray DA, Boissinot S, Shedlock AM, Botka C, Castoe TA, Colbourne JK, Fujita MK, Moreno RG, ten Hallers BF, Haussler D, Heger A, Heiman D, Janes DE, Johnson J, de Jong PJ, Koriabine MY, Lara M, Novick PA, Organ CL, Peach SE, Poe S, Pollock DD, de Queiroz K, Sanger T, Searle S, Smith JD, Smith Z, Swofford R, Turner-Maier J, Wade J, Young S, Zadissa A, Edwards SV, Glenn TC, Schneider CJ, Losos JB, Lander ES, Breen M, Ponting CP, Lindblad-Toh K. The genome of the green anole lizard and a comparative analysis with birds and mammals. Nature. 2011 Aug 31;477(7366):587–591.
Journal cover image

Published In

Nature

DOI

EISSN

1476-4687

Publication Date

August 31, 2011

Volume

477

Issue

7366

Start / End Page

587 / 591

Location

England

Related Subject Headings

  • X Chromosome
  • Synteny
  • Phylogeny
  • Molecular Sequence Data
  • Mammals
  • Lizards
  • Humans
  • Genomics
  • Genome
  • General Science & Technology