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Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods

Publication ,  Journal Article
Nishimura, A; Dunson, DB; Lu, J
Published in: Biometrika
June 1, 2020

Hamiltonian Monte Carlo has emerged as a standard tool for posterior computation. In this article we present an extension that can efficiently explore target distributions with discontinuous densities. Our extension in particular enables efficient sampling from ordinal parameters through the embedding of probability mass functions into continuous spaces. We motivate our approach through a theory of discontinuous Hamiltonian dynamics and develop a corresponding numerical solver. The proposed solver is the first of its kind, with a remarkable ability to exactly preserve the Hamiltonian. We apply our algorithm to challenging posterior inference problems to demonstrate its wide applicability and competitive performance.

Duke Scholars

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Published In

Biometrika

DOI

EISSN

1464-3510

ISSN

0006-3444

Publication Date

June 1, 2020

Volume

107

Issue

2

Start / End Page

365 / 380

Related Subject Headings

  • Statistics & Probability
  • 4905 Statistics
  • 3802 Econometrics
  • 1403 Econometrics
  • 0104 Statistics
  • 0103 Numerical and Computational Mathematics
 

Citation

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Nishimura, A., Dunson, D. B., & Lu, J. (2020). Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods. Biometrika, 107(2), 365–380. https://doi.org/10.1093/biomet/asz083
Nishimura, A., D. B. Dunson, and J. Lu. “Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods.” Biometrika 107, no. 2 (June 1, 2020): 365–80. https://doi.org/10.1093/biomet/asz083.
Nishimura A, Dunson DB, Lu J. Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods. Biometrika. 2020 Jun 1;107(2):365–80.
Nishimura, A., et al. “Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods.” Biometrika, vol. 107, no. 2, June 2020, pp. 365–80. Scopus, doi:10.1093/biomet/asz083.
Nishimura A, Dunson DB, Lu J. Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods. Biometrika. 2020 Jun 1;107(2):365–380.
Journal cover image

Published In

Biometrika

DOI

EISSN

1464-3510

ISSN

0006-3444

Publication Date

June 1, 2020

Volume

107

Issue

2

Start / End Page

365 / 380

Related Subject Headings

  • Statistics & Probability
  • 4905 Statistics
  • 3802 Econometrics
  • 1403 Econometrics
  • 0104 Statistics
  • 0103 Numerical and Computational Mathematics