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Patterns of somatic mutation in human cancer genomes.

Publication ,  Journal Article
Greenman, C; Stephens, P; Smith, R; Dalgliesh, GL; Hunter, C; Bignell, G; Davies, H; Teague, J; Butler, A; Stevens, C; Edkins, S; O'Meara, S ...
Published in: Nature
March 8, 2007

Cancers arise owing to mutations in a subset of genes that confer growth advantage. The availability of the human genome sequence led us to propose that systematic resequencing of cancer genomes for mutations would lead to the discovery of many additional cancer genes. Here we report more than 1,000 somatic mutations found in 274 megabases (Mb) of DNA corresponding to the coding exons of 518 protein kinase genes in 210 diverse human cancers. There was substantial variation in the number and pattern of mutations in individual cancers reflecting different exposures, DNA repair defects and cellular origins. Most somatic mutations are likely to be 'passengers' that do not contribute to oncogenesis. However, there was evidence for 'driver' mutations contributing to the development of the cancers studied in approximately 120 genes. Systematic sequencing of cancer genomes therefore reveals the evolutionary diversity of cancers and implicates a larger repertoire of cancer genes than previously anticipated.

Duke Scholars

Published In

Nature

DOI

EISSN

1476-4687

Publication Date

March 8, 2007

Volume

446

Issue

7132

Start / End Page

153 / 158

Location

England

Related Subject Headings

  • Protein Kinases
  • Neoplasms
  • Neoplasm Proteins
  • Mutation
  • Molecular Sequence Data
  • Humans
  • Genomics
  • Genome, Human
  • Genes, Neoplasm
  • General Science & Technology
 

Citation

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Greenman, C., Stephens, P., Smith, R., Dalgliesh, G. L., Hunter, C., Bignell, G., … Stratton, M. R. (2007). Patterns of somatic mutation in human cancer genomes. Nature, 446(7132), 153–158. https://doi.org/10.1038/nature05610
Greenman, Christopher, Philip Stephens, Raffaella Smith, Gillian L. Dalgliesh, Christopher Hunter, Graham Bignell, Helen Davies, et al. “Patterns of somatic mutation in human cancer genomes.Nature 446, no. 7132 (March 8, 2007): 153–58. https://doi.org/10.1038/nature05610.
Greenman C, Stephens P, Smith R, Dalgliesh GL, Hunter C, Bignell G, et al. Patterns of somatic mutation in human cancer genomes. Nature. 2007 Mar 8;446(7132):153–8.
Greenman, Christopher, et al. “Patterns of somatic mutation in human cancer genomes.Nature, vol. 446, no. 7132, Mar. 2007, pp. 153–58. Pubmed, doi:10.1038/nature05610.
Greenman C, Stephens P, Smith R, Dalgliesh GL, Hunter C, Bignell G, Davies H, Teague J, Butler A, Stevens C, Edkins S, O’Meara S, Vastrik I, Schmidt EE, Avis T, Barthorpe S, Bhamra G, Buck G, Choudhury B, Clements J, Cole J, Dicks E, Forbes S, Gray K, Halliday K, Harrison R, Hills K, Hinton J, Jenkinson A, Jones D, Menzies A, Mironenko T, Perry J, Raine K, Richardson D, Shepherd R, Small A, Tofts C, Varian J, Webb T, West S, Widaa S, Yates A, Cahill DP, Louis DN, Goldstraw P, Nicholson AG, Brasseur F, Looijenga L, Weber BL, Chiew Y-E, DeFazio A, Greaves MF, Green AR, Campbell P, Birney E, Easton DF, Chenevix-Trench G, Tan M-H, Khoo SK, Teh BT, Yuen ST, Leung SY, Wooster R, Futreal PA, Stratton MR. Patterns of somatic mutation in human cancer genomes. Nature. 2007 Mar 8;446(7132):153–158.
Journal cover image

Published In

Nature

DOI

EISSN

1476-4687

Publication Date

March 8, 2007

Volume

446

Issue

7132

Start / End Page

153 / 158

Location

England

Related Subject Headings

  • Protein Kinases
  • Neoplasms
  • Neoplasm Proteins
  • Mutation
  • Molecular Sequence Data
  • Humans
  • Genomics
  • Genome, Human
  • Genes, Neoplasm
  • General Science & Technology