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Applying Stochastic Process Model to Imputation of Censored Longitudinal Data

Publication ,  Conference
Zhbannikov, I; Arbeev, K; Yashin, A
Published in: ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics
August 15, 2018

Longitudinal data are widely used in medicine, demography, sociology and other areas. Incomplete observations in such data often confound the results of analysis. A plethora of data imputation methods have already been proposed to alleviate this problem. The Stochastic Process Model (SPM) represents a general framework for modeling joint evolution of repeatedly measured variables and time-to-event outcome typically observed in longitudinal studies of aging, health and longevity. It is perfectly suitable for imputing missing observations in censored longitudinal data. We applied SPM to the problem of imputation of censored missing longitudinal data. This model was applied both to the Framingham Heart Study and Cardiovascular Health Study data as well as to simulated datasets. We also present an R package stpm designed for this purpose.

Duke Scholars

Published In

ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics

DOI

Publication Date

August 15, 2018

Start / End Page

457 / 464
 

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Zhbannikov, I., Arbeev, K., & Yashin, A. (2018). Applying Stochastic Process Model to Imputation of Censored Longitudinal Data. In ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics (pp. 457–464). https://doi.org/10.1145/3233547.3233591
Zhbannikov, I., K. Arbeev, and A. Yashin. “Applying Stochastic Process Model to Imputation of Censored Longitudinal Data.” In ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics, 457–64, 2018. https://doi.org/10.1145/3233547.3233591.
Zhbannikov I, Arbeev K, Yashin A. Applying Stochastic Process Model to Imputation of Censored Longitudinal Data. In: ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics. 2018. p. 457–64.
Zhbannikov, I., et al. “Applying Stochastic Process Model to Imputation of Censored Longitudinal Data.” ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics, 2018, pp. 457–64. Scopus, doi:10.1145/3233547.3233591.
Zhbannikov I, Arbeev K, Yashin A. Applying Stochastic Process Model to Imputation of Censored Longitudinal Data. ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics. 2018. p. 457–464.

Published In

ACM Bcb 2018 Proceedings of the 2018 ACM International Conference on Bioinformatics Computational Biology and Health Informatics

DOI

Publication Date

August 15, 2018

Start / End Page

457 / 464