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Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone.

Publication ,  Journal Article
Wang, L; Luzynski, K; Pool, JE; Janoušek, V; Dufková, P; Vyskočilová, MM; Teeter, KC; Nachman, MW; Munclinger, P; Macholán, M; Piálek, J; Tucker, PK
Published in: Mol Ecol
July 2011

Theory predicts that naturally occurring hybrid zones between genetically distinct taxa can move over space and time as a result of selection and/or demographic processes, with certain types of hybrid zones being more or less likely to move. Determining whether a hybrid zone is stationary or moving has important implications for understanding evolutionary processes affecting interactions in hybrid populations. However, direct observations of hybrid zone movement are difficult to make unless the zone is moving rapidly. Here, evidence for movement in the house mouse Mus musculus domesticus × Mus musculus musculus hybrid zone is provided using measures of LD and haplotype structure among neighbouring SNP markers from across the genome. Local populations of mice across two transects in Germany and the Czech Republic were sampled, and a total of 1301 mice were genotyped at 1401 markers from the nuclear genome. Empirical measures of LD provide evidence for extinction and (re)colonization in single populations and, together with simulations, suggest hybrid zone movement because of either geography-dependent asymmetrical dispersal or selection favouring one subspecies over the other.

Duke Scholars

Published In

Mol Ecol

DOI

EISSN

1365-294X

Publication Date

July 2011

Volume

20

Issue

14

Start / End Page

2985 / 3000

Location

England

Related Subject Headings

  • Sequence Analysis, DNA
  • Polymorphism, Single Nucleotide
  • Mice
  • Linkage Disequilibrium
  • Hybridization, Genetic
  • Haplotypes
  • Germany
  • Geography
  • Genotyping Techniques
  • Genetics, Population
 

Citation

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Wang, L., Luzynski, K., Pool, J. E., Janoušek, V., Dufková, P., Vyskočilová, M. M., … Tucker, P. K. (2011). Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone. Mol Ecol, 20(14), 2985–3000. https://doi.org/10.1111/j.1365-294X.2011.05148.x
Wang, Liuyang, Ken Luzynski, John E. Pool, Václav Janoušek, Petra Dufková, Martina M. Vyskočilová, Katherine C. Teeter, et al. “Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone.Mol Ecol 20, no. 14 (July 2011): 2985–3000. https://doi.org/10.1111/j.1365-294X.2011.05148.x.
Wang L, Luzynski K, Pool JE, Janoušek V, Dufková P, Vyskočilová MM, et al. Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone. Mol Ecol. 2011 Jul;20(14):2985–3000.
Wang, Liuyang, et al. “Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone.Mol Ecol, vol. 20, no. 14, July 2011, pp. 2985–3000. Pubmed, doi:10.1111/j.1365-294X.2011.05148.x.
Wang L, Luzynski K, Pool JE, Janoušek V, Dufková P, Vyskočilová MM, Teeter KC, Nachman MW, Munclinger P, Macholán M, Piálek J, Tucker PK. Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone. Mol Ecol. 2011 Jul;20(14):2985–3000.
Journal cover image

Published In

Mol Ecol

DOI

EISSN

1365-294X

Publication Date

July 2011

Volume

20

Issue

14

Start / End Page

2985 / 3000

Location

England

Related Subject Headings

  • Sequence Analysis, DNA
  • Polymorphism, Single Nucleotide
  • Mice
  • Linkage Disequilibrium
  • Hybridization, Genetic
  • Haplotypes
  • Germany
  • Geography
  • Genotyping Techniques
  • Genetics, Population