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RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images.

Publication ,  Journal Article
Cunefare, D; Huckenpahler, AL; Patterson, EJ; Dubra, A; Carroll, J; Farsiu, S
Published in: Biomedical optics express
August 2019

Quantification of the human rod and cone photoreceptor mosaic in adaptive optics scanning light ophthalmoscope (AOSLO) images is useful for the study of various retinal pathologies. Subjective and time-consuming manual grading has remained the gold standard for evaluating these images, with no well validated automatic methods for detecting individual rods having been developed. We present a novel deep learning based automatic method, called the rod and cone CNN (RAC-CNN), for detecting and classifying rods and cones in multimodal AOSLO images. We test our method on images from healthy subjects as well as subjects with achromatopsia over a range of retinal eccentricities. We show that our method is on par with human grading for detecting rods and cones.

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Published In

Biomedical optics express

DOI

EISSN

2156-7085

ISSN

2156-7085

Publication Date

August 2019

Volume

10

Issue

8

Start / End Page

3815 / 3832

Related Subject Headings

  • 5102 Atomic, molecular and optical physics
  • 4003 Biomedical engineering
  • 3212 Ophthalmology and optometry
  • 0912 Materials Engineering
  • 0205 Optical Physics
 

Citation

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Cunefare, D., Huckenpahler, A. L., Patterson, E. J., Dubra, A., Carroll, J., & Farsiu, S. (2019). RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images. Biomedical Optics Express, 10(8), 3815–3832. https://doi.org/10.1364/boe.10.003815
Cunefare, David, Alison L. Huckenpahler, Emily J. Patterson, Alfredo Dubra, Joseph Carroll, and Sina Farsiu. “RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images.Biomedical Optics Express 10, no. 8 (August 2019): 3815–32. https://doi.org/10.1364/boe.10.003815.
Cunefare D, Huckenpahler AL, Patterson EJ, Dubra A, Carroll J, Farsiu S. RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images. Biomedical optics express. 2019 Aug;10(8):3815–32.
Cunefare, David, et al. “RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images.Biomedical Optics Express, vol. 10, no. 8, Aug. 2019, pp. 3815–32. Epmc, doi:10.1364/boe.10.003815.
Cunefare D, Huckenpahler AL, Patterson EJ, Dubra A, Carroll J, Farsiu S. RAC-CNN: multimodal deep learning based automatic detection and classification of rod and cone photoreceptors in adaptive optics scanning light ophthalmoscope images. Biomedical optics express. 2019 Aug;10(8):3815–3832.
Journal cover image

Published In

Biomedical optics express

DOI

EISSN

2156-7085

ISSN

2156-7085

Publication Date

August 2019

Volume

10

Issue

8

Start / End Page

3815 / 3832

Related Subject Headings

  • 5102 Atomic, molecular and optical physics
  • 4003 Biomedical engineering
  • 3212 Ophthalmology and optometry
  • 0912 Materials Engineering
  • 0205 Optical Physics