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Age-related variations in the methylome associated with gene expression in human monocytes and T cells.

Publication ,  Journal Article
Reynolds, LM; Taylor, JR; Ding, J; Lohman, K; Johnson, C; Siscovick, D; Burke, G; Post, W; Shea, S; Jacobs, DR; Stunnenberg, H; Hoeschele, I ...
Published in: Nat Commun
November 18, 2014

Age-related variations in DNA methylation have been reported; however, the functional relevance of these differentially methylated sites (age-dMS) are unclear. Here we report potentially functional age-dMS, defined as age- and cis-gene expression-associated methylation sites (age-eMS), identified by integrating genome-wide CpG methylation and gene expression profiles collected ex vivo from circulating T cells (227 CD4+ samples) and monocytes (1,264 CD14+ samples, age range: 55-94 years). None of the age-eMS detected in 227 T-cell samples are detectable in 1,264 monocyte samples, in contrast to the majority of age-dMS detected in T cells that replicated in monocytes. Age-eMS tend to be hypomethylated with older age, located in predicted enhancers and preferentially linked to expression of antigen processing and presentation genes. These results identify and characterize potentially functional age-related methylation in human T cells and monocytes, and provide novel insights into the role age-dMS may have in the aging process.

Duke Scholars

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

November 18, 2014

Volume

5

Start / End Page

5366

Location

England

Related Subject Headings

  • Monocytes
  • Middle Aged
  • Male
  • Humans
  • Genome, Human
  • Gene Expression
  • Female
  • Epigenesis, Genetic
  • DNA Methylation
  • Cohort Studies
 

Citation

APA
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ICMJE
MLA
NLM
Reynolds, L. M., Taylor, J. R., Ding, J., Lohman, K., Johnson, C., Siscovick, D., … Liu, Y. (2014). Age-related variations in the methylome associated with gene expression in human monocytes and T cells. Nat Commun, 5, 5366. https://doi.org/10.1038/ncomms6366
Reynolds, Lindsay M., Jackson R. Taylor, Jingzhong Ding, Kurt Lohman, Craig Johnson, David Siscovick, Gregory Burke, et al. “Age-related variations in the methylome associated with gene expression in human monocytes and T cells.Nat Commun 5 (November 18, 2014): 5366. https://doi.org/10.1038/ncomms6366.
Reynolds LM, Taylor JR, Ding J, Lohman K, Johnson C, Siscovick D, et al. Age-related variations in the methylome associated with gene expression in human monocytes and T cells. Nat Commun. 2014 Nov 18;5:5366.
Reynolds, Lindsay M., et al. “Age-related variations in the methylome associated with gene expression in human monocytes and T cells.Nat Commun, vol. 5, Nov. 2014, p. 5366. Pubmed, doi:10.1038/ncomms6366.
Reynolds LM, Taylor JR, Ding J, Lohman K, Johnson C, Siscovick D, Burke G, Post W, Shea S, Jacobs DR, Stunnenberg H, Kritchevsky SB, Hoeschele I, McCall CE, Herrington D, Tracy RP, Liu Y. Age-related variations in the methylome associated with gene expression in human monocytes and T cells. Nat Commun. 2014 Nov 18;5:5366.

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

November 18, 2014

Volume

5

Start / End Page

5366

Location

England

Related Subject Headings

  • Monocytes
  • Middle Aged
  • Male
  • Humans
  • Genome, Human
  • Gene Expression
  • Female
  • Epigenesis, Genetic
  • DNA Methylation
  • Cohort Studies