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Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza.

Publication ,  Journal Article
Abbott, TR; Dhamdhere, G; Liu, Y; Lin, X; Goudy, L; Zeng, L; Chemparathy, A; Chmura, S; Heaton, NS; Debs, R; Pande, T; Endy, D; La Russa, MF ...
Published in: Cell
May 14, 2020

The coronavirus disease 2019 (COVID-19) pandemic, caused by the SARS-CoV-2 virus, has highlighted the need for antiviral approaches that can target emerging viruses with no effective vaccines or pharmaceuticals. Here, we demonstrate a CRISPR-Cas13-based strategy, PAC-MAN (prophylactic antiviral CRISPR in human cells), for viral inhibition that can effectively degrade RNA from SARS-CoV-2 sequences and live influenza A virus (IAV) in human lung epithelial cells. We designed and screened CRISPR RNAs (crRNAs) targeting conserved viral regions and identified functional crRNAs targeting SARS-CoV-2. This approach effectively reduced H1N1 IAV load in respiratory epithelial cells. Our bioinformatic analysis showed that a group of only six crRNAs can target more than 90% of all coronaviruses. With the development of a safe and effective system for respiratory tract delivery, PAC-MAN has the potential to become an important pan-coronavirus inhibition strategy.

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Published In

Cell

DOI

EISSN

1097-4172

Publication Date

May 14, 2020

Volume

181

Issue

4

Start / End Page

865 / 876.e12

Location

United States

Related Subject Headings

  • Viral Nonstructural Proteins
  • SARS-CoV-2
  • RNA-Dependent RNA Polymerase
  • RNA, Viral
  • Pneumonia, Viral
  • Phylogeny
  • Phosphoproteins
  • Pandemics
  • Nucleocapsid Proteins
  • Lung
 

Citation

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Abbott, T. R., Dhamdhere, G., Liu, Y., Lin, X., Goudy, L., Zeng, L., … Qi, L. S. (2020). Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza. Cell, 181(4), 865-876.e12. https://doi.org/10.1016/j.cell.2020.04.020
Abbott, Timothy R., Girija Dhamdhere, Yanxia Liu, Xueqiu Lin, Laine Goudy, Leiping Zeng, Augustine Chemparathy, et al. “Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza.Cell 181, no. 4 (May 14, 2020): 865-876.e12. https://doi.org/10.1016/j.cell.2020.04.020.
Abbott TR, Dhamdhere G, Liu Y, Lin X, Goudy L, Zeng L, et al. Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza. Cell. 2020 May 14;181(4):865-876.e12.
Abbott, Timothy R., et al. “Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza.Cell, vol. 181, no. 4, May 2020, pp. 865-876.e12. Pubmed, doi:10.1016/j.cell.2020.04.020.
Abbott TR, Dhamdhere G, Liu Y, Lin X, Goudy L, Zeng L, Chemparathy A, Chmura S, Heaton NS, Debs R, Pande T, Endy D, La Russa MF, Lewis DB, Qi LS. Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza. Cell. 2020 May 14;181(4):865-876.e12.
Journal cover image

Published In

Cell

DOI

EISSN

1097-4172

Publication Date

May 14, 2020

Volume

181

Issue

4

Start / End Page

865 / 876.e12

Location

United States

Related Subject Headings

  • Viral Nonstructural Proteins
  • SARS-CoV-2
  • RNA-Dependent RNA Polymerase
  • RNA, Viral
  • Pneumonia, Viral
  • Phylogeny
  • Phosphoproteins
  • Pandemics
  • Nucleocapsid Proteins
  • Lung