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SIMON: Open-Source Knowledge Discovery Platform.

Publication ,  Journal Article
Tomic, A; Tomic, I; Waldron, L; Geistlinger, L; Kuhn, M; Spreng, RL; Dahora, LC; Seaton, KE; Tomaras, G; Hill, J; Duggal, NA; Pollock, RD ...
Published in: Patterns (N Y)
January 8, 2021

Data analysis and knowledge discovery has become more and more important in biology and medicine with the increasing complexity of biological datasets, but the necessarily sophisticated programming skills and in-depth understanding of algorithms needed pose barriers to most biologists and clinicians to perform such research. We have developed a modular open-source software, SIMON, to facilitate the application of 180+ state-of-the-art machine-learning algorithms to high-dimensional biomedical data. With an easy-to-use graphical user interface, standardized pipelines, and automated approach for machine learning and other statistical analysis methods, SIMON helps to identify optimal algorithms and provides a resource that empowers non-technical and technical researchers to identify crucial patterns in biomedical data.

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Published In

Patterns (N Y)

DOI

EISSN

2666-3899

Publication Date

January 8, 2021

Volume

2

Issue

1

Start / End Page

100178

Location

United States

Related Subject Headings

  • 4905 Statistics
  • 4611 Machine learning
  • 4603 Computer vision and multimedia computation
 

Citation

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Tomic, A., Tomic, I., Waldron, L., Geistlinger, L., Kuhn, M., Spreng, R. L., … Davis, M. M. (2021). SIMON: Open-Source Knowledge Discovery Platform. Patterns (N Y), 2(1), 100178. https://doi.org/10.1016/j.patter.2020.100178
Tomic, Adriana, Ivan Tomic, Levi Waldron, Ludwig Geistlinger, Max Kuhn, Rachel L. Spreng, Lindsay C. Dahora, et al. “SIMON: Open-Source Knowledge Discovery Platform.Patterns (N Y) 2, no. 1 (January 8, 2021): 100178. https://doi.org/10.1016/j.patter.2020.100178.
Tomic A, Tomic I, Waldron L, Geistlinger L, Kuhn M, Spreng RL, et al. SIMON: Open-Source Knowledge Discovery Platform. Patterns (N Y). 2021 Jan 8;2(1):100178.
Tomic, Adriana, et al. “SIMON: Open-Source Knowledge Discovery Platform.Patterns (N Y), vol. 2, no. 1, Jan. 2021, p. 100178. Pubmed, doi:10.1016/j.patter.2020.100178.
Tomic A, Tomic I, Waldron L, Geistlinger L, Kuhn M, Spreng RL, Dahora LC, Seaton KE, Tomaras G, Hill J, Duggal NA, Pollock RD, Lazarus NR, Harridge SDR, Lord JM, Khatri P, Pollard AJ, Davis MM. SIMON: Open-Source Knowledge Discovery Platform. Patterns (N Y). 2021 Jan 8;2(1):100178.

Published In

Patterns (N Y)

DOI

EISSN

2666-3899

Publication Date

January 8, 2021

Volume

2

Issue

1

Start / End Page

100178

Location

United States

Related Subject Headings

  • 4905 Statistics
  • 4611 Machine learning
  • 4603 Computer vision and multimedia computation