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A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale.

Publication ,  Journal Article
Bohland, JW; Wu, C; Barbas, H; Bokil, H; Bota, M; Breiter, HC; Cline, HT; Doyle, JC; Freed, PJ; Greenspan, RJ; Haber, SN; Hawrylycz, M ...
Published in: PLoS Comput Biol
March 2009

In this era of complete genomes, our knowledge of neuroanatomical circuitry remains surprisingly sparse. Such knowledge is critical, however, for both basic and clinical research into brain function. Here we advocate for a concerted effort to fill this gap, through systematic, experimental mapping of neural circuits at a mesoscopic scale of resolution suitable for comprehensive, brainwide coverage, using injections of tracers or viral vectors. We detail the scientific and medical rationale and briefly review existing knowledge and experimental techniques. We define a set of desiderata, including brainwide coverage; validated and extensible experimental techniques suitable for standardization and automation; centralized, open-access data repository; compatibility with existing resources; and tractability with current informatics technology. We discuss a hypothetical but tractable plan for mouse, additional efforts for the macaque, and technique development for human. We estimate that the mouse connectivity project could be completed within five years with a comparatively modest budget.

Duke Scholars

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Published In

PLoS Comput Biol

DOI

EISSN

1553-7358

Publication Date

March 2009

Volume

5

Issue

3

Start / End Page

e1000334

Location

United States

Related Subject Headings

  • Research Design
  • Neuroanatomy
  • Nerve Net
  • Models, Neurological
  • Mice
  • Macaca
  • Humans
  • Databases, Factual
  • Brain
  • Bioinformatics
 

Citation

APA
Chicago
ICMJE
MLA
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Bohland, J. W., Wu, C., Barbas, H., Bokil, H., Bota, M., Breiter, H. C., … Mitra, P. P. (2009). A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. PLoS Comput Biol, 5(3), e1000334. https://doi.org/10.1371/journal.pcbi.1000334
Bohland, Jason W., Caizhi Wu, Helen Barbas, Hemant Bokil, Mihail Bota, Hans C. Breiter, Hollis T. Cline, et al. “A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale.PLoS Comput Biol 5, no. 3 (March 2009): e1000334. https://doi.org/10.1371/journal.pcbi.1000334.
Bohland JW, Wu C, Barbas H, Bokil H, Bota M, Breiter HC, et al. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. PLoS Comput Biol. 2009 Mar;5(3):e1000334.
Bohland, Jason W., et al. “A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale.PLoS Comput Biol, vol. 5, no. 3, Mar. 2009, p. e1000334. Pubmed, doi:10.1371/journal.pcbi.1000334.
Bohland JW, Wu C, Barbas H, Bokil H, Bota M, Breiter HC, Cline HT, Doyle JC, Freed PJ, Greenspan RJ, Haber SN, Hawrylycz M, Herrera DG, Hilgetag CC, Huang ZJ, Jones A, Jones EG, Karten HJ, Kleinfeld D, Kötter R, Lester HA, Lin JM, Mensh BD, Mikula S, Panksepp J, Price JL, Safdieh J, Saper CB, Schiff ND, Schmahmann JD, Stillman BW, Svoboda K, Swanson LW, Toga AW, Van Essen DC, Watson JD, Mitra PP. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. PLoS Comput Biol. 2009 Mar;5(3):e1000334.

Published In

PLoS Comput Biol

DOI

EISSN

1553-7358

Publication Date

March 2009

Volume

5

Issue

3

Start / End Page

e1000334

Location

United States

Related Subject Headings

  • Research Design
  • Neuroanatomy
  • Nerve Net
  • Models, Neurological
  • Mice
  • Macaca
  • Humans
  • Databases, Factual
  • Brain
  • Bioinformatics