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Iterative Outlier Removal: A Method for Identifying Outliers in Laboratory Recalibration Studies.

Publication ,  Journal Article
Parrinello, CM; Grams, ME; Sang, Y; Couper, D; Wruck, LM; Li, D; Eckfeldt, JH; Selvin, E; Coresh, J
Published in: Clin Chem
July 2016

BACKGROUND: Extreme values that arise for any reason, including those through nonlaboratory measurement procedure-related processes (inadequate mixing, evaporation, mislabeling), lead to outliers and inflate errors in recalibration studies. We present an approach termed iterative outlier removal (IOR) for identifying such outliers. METHODS: We previously identified substantial laboratory drift in uric acid measurements in the Atherosclerosis Risk in Communities (ARIC) Study over time. Serum uric acid was originally measured in 1990-1992 on a Coulter DACOS instrument using an uricase-based measurement procedure. To recalibrate previous measured concentrations to a newer enzymatic colorimetric measurement procedure, uric acid was remeasured in 200 participants from stored plasma in 2011-2013 on a Beckman Olympus 480 autoanalyzer. To conduct IOR, we excluded data points >3 SDs from the mean difference. We continued this process using the resulting data until no outliers remained. RESULTS: IOR detected more outliers and yielded greater precision in simulation. The original mean difference (SD) in uric acid was 1.25 (0.62) mg/dL. After 4 iterations, 9 outliers were excluded, and the mean difference (SD) was 1.23 (0.45) mg/dL. Conducting only one round of outlier removal (standard approach) would have excluded 4 outliers [mean difference (SD) = 1.22 (0.51) mg/dL]. Applying the recalibration (derived from Deming regression) from each approach to the original measurements, the prevalence of hyperuricemia (>7 mg/dL) was 28.5% before IOR and 8.5% after IOR. CONCLUSIONS: IOR is a useful method for removal of extreme outliers irrelevant to recalibrating laboratory measurements, and identifies more extraneous outliers than the standard approach.

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Published In

Clin Chem

DOI

EISSN

1530-8561

Publication Date

July 2016

Volume

62

Issue

7

Start / End Page

966 / 972

Location

England

Related Subject Headings

  • Uric Acid
  • Humans
  • General Clinical Medicine
  • Data Interpretation, Statistical
  • Clinical Laboratory Techniques
  • Calibration
  • Atherosclerosis
  • 3205 Medical biochemistry and metabolomics
  • 3202 Clinical sciences
  • 1103 Clinical Sciences
 

Citation

APA
Chicago
ICMJE
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Parrinello, C. M., Grams, M. E., Sang, Y., Couper, D., Wruck, L. M., Li, D., … Coresh, J. (2016). Iterative Outlier Removal: A Method for Identifying Outliers in Laboratory Recalibration Studies. Clin Chem, 62(7), 966–972. https://doi.org/10.1373/clinchem.2016.255216
Parrinello, Christina M., Morgan E. Grams, Yingying Sang, David Couper, Lisa M. Wruck, Danni Li, John H. Eckfeldt, Elizabeth Selvin, and Josef Coresh. “Iterative Outlier Removal: A Method for Identifying Outliers in Laboratory Recalibration Studies.Clin Chem 62, no. 7 (July 2016): 966–72. https://doi.org/10.1373/clinchem.2016.255216.
Parrinello CM, Grams ME, Sang Y, Couper D, Wruck LM, Li D, et al. Iterative Outlier Removal: A Method for Identifying Outliers in Laboratory Recalibration Studies. Clin Chem. 2016 Jul;62(7):966–72.
Parrinello, Christina M., et al. “Iterative Outlier Removal: A Method for Identifying Outliers in Laboratory Recalibration Studies.Clin Chem, vol. 62, no. 7, July 2016, pp. 966–72. Pubmed, doi:10.1373/clinchem.2016.255216.
Parrinello CM, Grams ME, Sang Y, Couper D, Wruck LM, Li D, Eckfeldt JH, Selvin E, Coresh J. Iterative Outlier Removal: A Method for Identifying Outliers in Laboratory Recalibration Studies. Clin Chem. 2016 Jul;62(7):966–972.

Published In

Clin Chem

DOI

EISSN

1530-8561

Publication Date

July 2016

Volume

62

Issue

7

Start / End Page

966 / 972

Location

England

Related Subject Headings

  • Uric Acid
  • Humans
  • General Clinical Medicine
  • Data Interpretation, Statistical
  • Clinical Laboratory Techniques
  • Calibration
  • Atherosclerosis
  • 3205 Medical biochemistry and metabolomics
  • 3202 Clinical sciences
  • 1103 Clinical Sciences