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Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos.

Publication ,  Journal Article
Meng, F; Xu, C; Park, K-S; Kaniskan, HÜ; Wang, GG; Jin, J
Published in: J Med Chem
August 11, 2022

Overexpression of nuclear receptor binding SET domain protein 2 (NSD2) is frequent in multiple myeloma (MM). However, existing NSD2 inhibitors are largely ineffective in suppressing MM cell proliferation. Here, we report the discovery of a first-in-class NSD2 proteolysis targeting chimera (PROTAC) degrader, 9 (MS159), and two structurally similar controls, 17 (MS159N1) and 18 (MS159N2), with diminished binding to the cereblon (CRBN) E3 ligase and NSD2, respectively. Compound 9, but not 17 and 18, effectively degraded NSD2 in a concentration-, time-, CRBN-, and proteasome-dependent manner. Compound 9 also effectively degraded CRBN neo-substrates IKZF1 and IKZF3, but not GSPT1. Importantly, compound 9 was much more effective in suppressing the growth in cancer cells than the parent NSD2 binder. Moreover, compound 9 was bioavailable in mice. Altogether, compound 9 and its two controls 17 and 18 are valuable chemical tools for exploring the roles of NSD2 in health and disease.

Duke Scholars

Published In

J Med Chem

DOI

EISSN

1520-4804

Publication Date

August 11, 2022

Volume

65

Issue

15

Start / End Page

10611 / 10625

Location

United States

Related Subject Headings

  • Ubiquitin-Protein Ligases
  • Receptors, Cytoplasmic and Nuclear
  • Proteolysis
  • PR-SET Domains
  • Mice
  • Medicinal & Biomolecular Chemistry
  • Ikaros Transcription Factor
  • Histone-Lysine N-Methyltransferase
  • Animals
  • Adaptor Proteins, Signal Transducing
 

Citation

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MLA
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Meng, F., Xu, C., Park, K.-S., Kaniskan, H. Ü., Wang, G. G., & Jin, J. (2022). Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos. J Med Chem, 65(15), 10611–10625. https://doi.org/10.1021/acs.jmedchem.2c00807
Meng, Fanye, Chenxi Xu, Kwang-Su Park, H Ümit Kaniskan, Gang Greg Wang, and Jian Jin. “Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos.J Med Chem 65, no. 15 (August 11, 2022): 10611–25. https://doi.org/10.1021/acs.jmedchem.2c00807.
Meng F, Xu C, Park K-S, Kaniskan HÜ, Wang GG, Jin J. Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos. J Med Chem. 2022 Aug 11;65(15):10611–25.
Meng, Fanye, et al. “Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos.J Med Chem, vol. 65, no. 15, Aug. 2022, pp. 10611–25. Pubmed, doi:10.1021/acs.jmedchem.2c00807.
Meng F, Xu C, Park K-S, Kaniskan HÜ, Wang GG, Jin J. Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos. J Med Chem. 2022 Aug 11;65(15):10611–10625.
Journal cover image

Published In

J Med Chem

DOI

EISSN

1520-4804

Publication Date

August 11, 2022

Volume

65

Issue

15

Start / End Page

10611 / 10625

Location

United States

Related Subject Headings

  • Ubiquitin-Protein Ligases
  • Receptors, Cytoplasmic and Nuclear
  • Proteolysis
  • PR-SET Domains
  • Mice
  • Medicinal & Biomolecular Chemistry
  • Ikaros Transcription Factor
  • Histone-Lysine N-Methyltransferase
  • Animals
  • Adaptor Proteins, Signal Transducing