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Predicting presumed serious infection among hospitalized children on central venous lines with machine learning.

Publication ,  Journal Article
Tabaie, A; Orenstein, EW; Nemati, S; Basu, RK; Kandaswamy, S; Clifford, GD; Kamaleswaran, R
Published in: Comput Biol Med
May 2021

BACKGROUND: Presumed serious infection (PSI) is defined as a blood culture drawn and new antibiotic course of at least 4 days among pediatric patients with Central Venous Lines (CVLs). Early PSI prediction and use of medical interventions can prevent adverse outcomes and improve the quality of care. METHODS: Clinical features including demographics, laboratory results, vital signs, characteristics of the CVLs and medications used were extracted retrospectively from electronic medical records. Data were aggregated across all hospitals within a single pediatric health system and used to train machine learning models (XGBoost and ElasticNet) to predict the occurrence of PSI 8 h prior to clinical suspicion. Prediction for PSI was benchmarked against PRISM-III. RESULTS: Our model achieved an area under the receiver operating characteristic curve of 0.84 (95% CI = [0.82, 0.85]), sensitivity of 0.73 [0.69, 0.74], and positive predictive value (PPV) of 0.36 [0.34, 0.36]. The PRISM-III conversely achieved a lower sensitivity of 0.19 [0.16, 0.22] and PPV of 0.30 [0.26, 0.34] at a cut-off of ≥ 10. The features with the most impact on the PSI prediction were maximum diastolic blood pressure prior to PSI prediction (mean SHAP = 3.4), height (mean SHAP = 3.2), and maximum temperature prior to PSI prediction (mean SHAP = 2.6). CONCLUSION: A machine learning model using common features in the electronic medical records can predict the onset of serious infections in children with central venous lines at least 8 h prior to when a clinical team drew a blood culture.

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Published In

Comput Biol Med

DOI

EISSN

1879-0534

Publication Date

May 2021

Volume

132

Start / End Page

104289

Location

United States

Related Subject Headings

  • Retrospective Studies
  • ROC Curve
  • Predictive Value of Tests
  • Machine Learning
  • Humans
  • Child, Hospitalized
  • Child
  • Biomedical Engineering
  • 4601 Applied computing
  • 4203 Health services and systems
 

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Tabaie, A., Orenstein, E. W., Nemati, S., Basu, R. K., Kandaswamy, S., Clifford, G. D., & Kamaleswaran, R. (2021). Predicting presumed serious infection among hospitalized children on central venous lines with machine learning. Comput Biol Med, 132, 104289. https://doi.org/10.1016/j.compbiomed.2021.104289
Tabaie, Azade, Evan W. Orenstein, Shamim Nemati, Rajit K. Basu, Swaminathan Kandaswamy, Gari D. Clifford, and Rishikesan Kamaleswaran. “Predicting presumed serious infection among hospitalized children on central venous lines with machine learning.Comput Biol Med 132 (May 2021): 104289. https://doi.org/10.1016/j.compbiomed.2021.104289.
Tabaie A, Orenstein EW, Nemati S, Basu RK, Kandaswamy S, Clifford GD, et al. Predicting presumed serious infection among hospitalized children on central venous lines with machine learning. Comput Biol Med. 2021 May;132:104289.
Tabaie, Azade, et al. “Predicting presumed serious infection among hospitalized children on central venous lines with machine learning.Comput Biol Med, vol. 132, May 2021, p. 104289. Pubmed, doi:10.1016/j.compbiomed.2021.104289.
Tabaie A, Orenstein EW, Nemati S, Basu RK, Kandaswamy S, Clifford GD, Kamaleswaran R. Predicting presumed serious infection among hospitalized children on central venous lines with machine learning. Comput Biol Med. 2021 May;132:104289.
Journal cover image

Published In

Comput Biol Med

DOI

EISSN

1879-0534

Publication Date

May 2021

Volume

132

Start / End Page

104289

Location

United States

Related Subject Headings

  • Retrospective Studies
  • ROC Curve
  • Predictive Value of Tests
  • Machine Learning
  • Humans
  • Child, Hospitalized
  • Child
  • Biomedical Engineering
  • 4601 Applied computing
  • 4203 Health services and systems