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Bulk and single-cell transcriptome datasets of the mouse fetal and adult rete ovarii and surrounding tissues.

Publication ,  Journal Article
Anbarci, DN; O'Rourke, R; Xiang, Y; Peters, DT; Capel, B; McKey, J
Published in: Sci Data
April 13, 2024

The rete ovarii (RO) is an epithelial structure that arises during development in close proximity to the ovary and persists throughout adulthood. However, the functional significance of the RO remains elusive, and it is absent from recent discussions of female reproductive anatomy. The RO comprises three regions: the intraovarian rete within the ovary, the extraovarian rete in the periovarian tissue, and the connecting rete linking the two. We hypothesize that the RO plays a pivotal role in ovarian homeostasis and responses to physiological changes. To begin to uncover the nature and function of RO cells, we conducted transcriptomic profiling of the RO. This study presents three datasets, and reports our analysis and quality control approaches for bulk, single-cell, and nucleus-level transcriptomics of the fetal and adult RO tissues using the Pax8-rtTA; Tre-H2B-GFP mouse line, where all RO regions express nuclear GFP. The integration and rigorous validation of these datasets will advance our understanding of the RO's roles in ovarian development, female maturation, and adult female fertility.

Duke Scholars

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

April 13, 2024

Volume

11

Issue

1

Start / End Page

383

Location

England

Related Subject Headings

  • Transcriptome
  • Ovary
  • Mice
  • Gene Expression Profiling
  • Fetus
  • Female
  • Animals
 

Citation

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Anbarci, D. N., O’Rourke, R., Xiang, Y., Peters, D. T., Capel, B., & McKey, J. (2024). Bulk and single-cell transcriptome datasets of the mouse fetal and adult rete ovarii and surrounding tissues. Sci Data, 11(1), 383. https://doi.org/10.1038/s41597-024-03227-x
Anbarci, Dilara N., Rebecca O’Rourke, Yu Xiang, Derek T. Peters, Blanche Capel, and Jennifer McKey. “Bulk and single-cell transcriptome datasets of the mouse fetal and adult rete ovarii and surrounding tissues.Sci Data 11, no. 1 (April 13, 2024): 383. https://doi.org/10.1038/s41597-024-03227-x.
Anbarci DN, O’Rourke R, Xiang Y, Peters DT, Capel B, McKey J. Bulk and single-cell transcriptome datasets of the mouse fetal and adult rete ovarii and surrounding tissues. Sci Data. 2024 Apr 13;11(1):383.
Anbarci, Dilara N., et al. “Bulk and single-cell transcriptome datasets of the mouse fetal and adult rete ovarii and surrounding tissues.Sci Data, vol. 11, no. 1, Apr. 2024, p. 383. Pubmed, doi:10.1038/s41597-024-03227-x.
Anbarci DN, O’Rourke R, Xiang Y, Peters DT, Capel B, McKey J. Bulk and single-cell transcriptome datasets of the mouse fetal and adult rete ovarii and surrounding tissues. Sci Data. 2024 Apr 13;11(1):383.

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

April 13, 2024

Volume

11

Issue

1

Start / End Page

383

Location

England

Related Subject Headings

  • Transcriptome
  • Ovary
  • Mice
  • Gene Expression Profiling
  • Fetus
  • Female
  • Animals