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Deformation-encoding Deep Learning Transformer for High-Frame-Rate Cardiac Cine MRI.

Publication ,  Journal Article
Morales, MA; Ghanbari, F; Nakamori, S; Assana, S; Amyar, A; Yoon, S; Rodriguez, J; Maron, MS; Rowin, EJ; Kim, J; Judd, RM; Weinsaft, JW; Nezafat, R
Published in: Radiol Cardiothorac Imaging
June 2024

Purpose To develop a deep learning model for increasing cardiac cine frame rate while maintaining spatial resolution and scan time. Materials and Methods A transformer-based model was trained and tested on a retrospective sample of cine images from 5840 patients (mean age, 55 years ± 19 [SD]; 3527 male patients) referred for clinical cardiac MRI from 2003 to 2021 at nine centers; images were acquired using 1.5- and 3-T scanners from three vendors. Data from three centers were used for training and testing (4:1 ratio). The remaining data were used for external testing. Cines with downsampled frame rates were restored using linear, bicubic, and model-based interpolation. The root mean square error between interpolated and original cine images was modeled using ordinary least squares regression. In a prospective study of 49 participants referred for clinical cardiac MRI (mean age, 56 years ± 13; 25 male participants) and 12 healthy participants (mean age, 51 years ± 16; eight male participants), the model was applied to cines acquired at 25 frames per second (fps), thereby doubling the frame rate, and these interpolated cines were compared with actual 50-fps cines. The preference of two readers based on perceived temporal smoothness and image quality was evaluated using a noninferiority margin of 10%. Results The model generated artifact-free interpolated images. Ordinary least squares regression analysis accounting for vendor and field strength showed lower error (P < .001) with model-based interpolation compared with linear and bicubic interpolation in internal and external test sets. The highest proportion of reader choices was "no preference" (84 of 122) between actual and interpolated 50-fps cines. The 90% CI for the difference between reader proportions favoring collected (15 of 122) and interpolated (23 of 122) high-frame-rate cines was -0.01 to 0.14, indicating noninferiority. Conclusion A transformer-based deep learning model increased cardiac cine frame rates while preserving both spatial resolution and scan time, resulting in images with quality comparable to that of images obtained at actual high frame rates. Keywords: Functional MRI, Heart, Cardiac, Deep Learning, High Frame Rate Supplemental material is available for this article. © RSNA, 2024.

Duke Scholars

Published In

Radiol Cardiothorac Imaging

DOI

EISSN

2638-6135

Publication Date

June 2024

Volume

6

Issue

3

Start / End Page

e230177

Location

United States

Related Subject Headings

  • Retrospective Studies
  • Prospective Studies
  • Middle Aged
  • Male
  • Magnetic Resonance Imaging, Cine
  • Image Interpretation, Computer-Assisted
  • Humans
  • Heart
  • Female
  • Deep Learning
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Morales, M. A., Ghanbari, F., Nakamori, S., Assana, S., Amyar, A., Yoon, S., … Nezafat, R. (2024). Deformation-encoding Deep Learning Transformer for High-Frame-Rate Cardiac Cine MRI. Radiol Cardiothorac Imaging, 6(3), e230177. https://doi.org/10.1148/ryct.230177
Morales, Manuel A., Fahime Ghanbari, Shiro Nakamori, Salah Assana, Amine Amyar, Siyeop Yoon, Jennifer Rodriguez, et al. “Deformation-encoding Deep Learning Transformer for High-Frame-Rate Cardiac Cine MRI.Radiol Cardiothorac Imaging 6, no. 3 (June 2024): e230177. https://doi.org/10.1148/ryct.230177.
Morales MA, Ghanbari F, Nakamori S, Assana S, Amyar A, Yoon S, et al. Deformation-encoding Deep Learning Transformer for High-Frame-Rate Cardiac Cine MRI. Radiol Cardiothorac Imaging. 2024 Jun;6(3):e230177.
Morales, Manuel A., et al. “Deformation-encoding Deep Learning Transformer for High-Frame-Rate Cardiac Cine MRI.Radiol Cardiothorac Imaging, vol. 6, no. 3, June 2024, p. e230177. Pubmed, doi:10.1148/ryct.230177.
Morales MA, Ghanbari F, Nakamori S, Assana S, Amyar A, Yoon S, Rodriguez J, Maron MS, Rowin EJ, Kim J, Judd RM, Weinsaft JW, Nezafat R. Deformation-encoding Deep Learning Transformer for High-Frame-Rate Cardiac Cine MRI. Radiol Cardiothorac Imaging. 2024 Jun;6(3):e230177.

Published In

Radiol Cardiothorac Imaging

DOI

EISSN

2638-6135

Publication Date

June 2024

Volume

6

Issue

3

Start / End Page

e230177

Location

United States

Related Subject Headings

  • Retrospective Studies
  • Prospective Studies
  • Middle Aged
  • Male
  • Magnetic Resonance Imaging, Cine
  • Image Interpretation, Computer-Assisted
  • Humans
  • Heart
  • Female
  • Deep Learning