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Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations.

Publication ,  Journal Article
Lucas, SE; Yang, T; Wimberly, CE; Parmar, KV; Hansen, HM; de Smith, AJ; Morimoto, LM; Metayer, C; Ostrom, QT; Eward, WC; Graves, LA; Walsh, KM ...
Published in: Cancer Epidemiol
October 2024

BACKGROUND: Canine and human osteosarcoma are similar in clinical presentation and tumor genomics. Giant breed dogs experience elevated osteosarcoma incidence, and taller stature remains a consistent risk factor for human osteosarcoma. Whether evolutionarily conserved genes contribute to both human and canine osteosarcoma predisposition merits evaluation. METHODS: A multi-center sample of childhood osteosarcoma patients and controls underwent genome-wide genotyping and imputation. Ancestry-adjusted SNP associations were calculated within each dataset using logistic regression, then meta-analyzed across the three datasets, totaling 1091 patients and 3026 controls. Ten regions previously associated with canine osteosarcoma risk were mapped to the human genome, spanning ∼6 Mb. We prioritized association testing of 5985 human SNPs mapping to candidate osteosarcoma risk regions detected in Irish wolfhounds, the largest dog breed studied. Secondary analyses explored 6289 additional human SNPs mapping to candidate osteosarcoma risk regions identified in Rottweilers and greyhounds. RESULTS: Fourteen SNPs were associated with human osteosarcoma risk after adjustment for multiple comparisons, all within a 42 kb region of human Chromosome 7p12.1. The lead variant was rs17454681 (OR=1.25, 95 %CI: 1.12-1.39; P=4.1×10-5), and independent risk variants were not observed in conditional analyses. While the associated region spanned 2.1 Mb and contained eight genes in Irish wolfhounds, associations were localized to a 50-fold smaller region of the human genome and strongly implicate GRB10 (growth factor receptor-bound protein 10) in canine and human osteosarcoma predisposition. PheWAS analysis in UK Biobank data identified noteworthy associations of the rs17454681 risk allele with varied measures of height and pubertal timing. CONCLUSIONS: Our comparative oncology analysis identified a novel human osteosarcoma risk allele near GRB10, a growth inhibitor that suppresses activated receptor tyrosine kinases including IGF1R, PDGFRB, and EGFR. Epidemiologists may benefit from leveraging cross-species comparisons to identify haplotypes in highly susceptible but genetically homogenous populations of domesticated animals, then fine-mapping these associations in diverse human populations.

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Published In

Cancer Epidemiol

DOI

EISSN

1877-783X

Publication Date

October 2024

Volume

92

Start / End Page

102599

Location

Netherlands

Related Subject Headings

  • Risk Factors
  • Polymorphism, Single Nucleotide
  • Osteosarcoma
  • Oncology & Carcinogenesis
  • Male
  • Humans
  • Genome-Wide Association Study
  • Genetic Predisposition to Disease
  • GRB10 Adaptor Protein
  • Female
 

Citation

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Lucas, S. E., Yang, T., Wimberly, C. E., Parmar, K. V., Hansen, H. M., de Smith, A. J., … Walsh, K. M. (2024). Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations. Cancer Epidemiol, 92, 102599. https://doi.org/10.1016/j.canep.2024.102599
Lucas, Sydney E., Tianzhong Yang, Courtney E. Wimberly, Kajal V. Parmar, Helen M. Hansen, Adam J. de Smith, Libby M. Morimoto, et al. “Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations.Cancer Epidemiol 92 (October 2024): 102599. https://doi.org/10.1016/j.canep.2024.102599.
Lucas SE, Yang T, Wimberly CE, Parmar KV, Hansen HM, de Smith AJ, et al. Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations. Cancer Epidemiol. 2024 Oct;92:102599.
Lucas, Sydney E., et al. “Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations.Cancer Epidemiol, vol. 92, Oct. 2024, p. 102599. Pubmed, doi:10.1016/j.canep.2024.102599.
Lucas SE, Yang T, Wimberly CE, Parmar KV, Hansen HM, de Smith AJ, Morimoto LM, Metayer C, Ostrom QT, Eward WC, Graves LA, Wagner LM, Wiemels JL, Spector LG, Walsh KM. Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations. Cancer Epidemiol. 2024 Oct;92:102599.
Journal cover image

Published In

Cancer Epidemiol

DOI

EISSN

1877-783X

Publication Date

October 2024

Volume

92

Start / End Page

102599

Location

Netherlands

Related Subject Headings

  • Risk Factors
  • Polymorphism, Single Nucleotide
  • Osteosarcoma
  • Oncology & Carcinogenesis
  • Male
  • Humans
  • Genome-Wide Association Study
  • Genetic Predisposition to Disease
  • GRB10 Adaptor Protein
  • Female