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Scalp surface estimation and head registration using sparse sampling and 3D statistical models.

Publication ,  Journal Article
Schlesinger, O; Kundu, R; Isaev, D; Choi, JY; Goetz, SM; Turner, DA; Sapiro, G; Peterchev, AV; Di Martino, JM
Published in: Comput Biol Med
August 2024

Registering the head and estimating the scalp surface are important for various biomedical procedures, including those using neuronavigation to localize brain stimulation or recording. However, neuronavigation systems rely on manually-identified fiducial head targets and often require a patient-specific MRI for accurate registration, limiting adoption. We propose a practical technique capable of inferring the scalp shape and use it to accurately register the subject's head. Our method does not require anatomical landmark annotation or an individual MRI scan, yet achieves accurate registration of the subject's head and estimation of its surface. The scalp shape is estimated from surface samples easily acquired using existing pointer tools, and registration exploits statistical head model priors. Our method allows for the acquisition of non-trivial shapes from a limited number of data points while leveraging their object class priors, surpassing the accuracy of common reconstruction and registration methods using the same tools. The proposed approach is evaluated in a virtual study with head MRI data from 1152 subjects, achieving an average reconstruction root-mean-square error of 2.95 mm, which outperforms a common neuronavigation technique by 2.70 mm. We also characterize the error under different conditions and provide guidelines for efficient sampling. Furthermore, we demonstrate and validate the proposed method on data from 50 subjects collected with conventional neuronavigation tools and setup, obtaining an average root-mean-square error of 2.89 mm; adding landmark-based registration improves this error to 2.63 mm. The simulation and experimental results support the proposed method's effectiveness with or without landmark annotation, highlighting its broad applicability.

Duke Scholars

Published In

Comput Biol Med

DOI

EISSN

1879-0534

Publication Date

August 2024

Volume

178

Start / End Page

108689

Location

United States

Related Subject Headings

  • Scalp
  • Reproducibility of Results
  • Neuronavigation
  • Models, Statistical
  • Models, Anatomic
  • Male
  • Magnetic Resonance Imaging
  • Humans
  • Female
  • Biomedical Technology
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Schlesinger, O., Kundu, R., Isaev, D., Choi, J. Y., Goetz, S. M., Turner, D. A., … Di Martino, J. M. (2024). Scalp surface estimation and head registration using sparse sampling and 3D statistical models. Comput Biol Med, 178, 108689. https://doi.org/10.1016/j.compbiomed.2024.108689
Schlesinger, Oded, Raj Kundu, Dmitry Isaev, Jessica Y. Choi, Stefan M. Goetz, Dennis A. Turner, Guillermo Sapiro, Angel V. Peterchev, and J Matias Di Martino. “Scalp surface estimation and head registration using sparse sampling and 3D statistical models.Comput Biol Med 178 (August 2024): 108689. https://doi.org/10.1016/j.compbiomed.2024.108689.
Schlesinger O, Kundu R, Isaev D, Choi JY, Goetz SM, Turner DA, et al. Scalp surface estimation and head registration using sparse sampling and 3D statistical models. Comput Biol Med. 2024 Aug;178:108689.
Schlesinger, Oded, et al. “Scalp surface estimation and head registration using sparse sampling and 3D statistical models.Comput Biol Med, vol. 178, Aug. 2024, p. 108689. Pubmed, doi:10.1016/j.compbiomed.2024.108689.
Schlesinger O, Kundu R, Isaev D, Choi JY, Goetz SM, Turner DA, Sapiro G, Peterchev AV, Di Martino JM. Scalp surface estimation and head registration using sparse sampling and 3D statistical models. Comput Biol Med. 2024 Aug;178:108689.
Journal cover image

Published In

Comput Biol Med

DOI

EISSN

1879-0534

Publication Date

August 2024

Volume

178

Start / End Page

108689

Location

United States

Related Subject Headings

  • Scalp
  • Reproducibility of Results
  • Neuronavigation
  • Models, Statistical
  • Models, Anatomic
  • Male
  • Magnetic Resonance Imaging
  • Humans
  • Female
  • Biomedical Technology