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Predicting neutropenia risk in patients with cancer using electronic data.

Publication ,  Journal Article
Pawloski, PA; Thomas, AJ; Kane, S; Vazquez-Benitez, G; Shapiro, GR; Lyman, GH
Published in: J Am Med Inform Assoc
April 1, 2017

OBJECTIVES: Clinical guidelines recommending the use of myeloid growth factors are largely based on the prescribed chemotherapy regimen. The guidelines suggest that oncologists consider patient-specific characteristics when prescribing granulocyte-colony stimulating factor (G-CSF) prophylaxis; however, a mechanism to quantify individual patient risk is lacking. Readily available electronic health record (EHR) data can provide patient-specific information needed for individualized neutropenia risk estimation. An evidence-based, individualized neutropenia risk estimation algorithm has been developed. This study evaluated the automated extraction of EHR chemotherapy treatment data and externally validated the neutropenia risk prediction model. MATERIALS AND METHODS: A retrospective cohort of adult patients with newly diagnosed breast, colorectal, lung, lymphoid, or ovarian cancer who received the first cycle of a cytotoxic chemotherapy regimen from 2008 to 2013 were recruited from a single cancer clinic. Electronically extracted EHR chemotherapy treatment data were validated by chart review. Neutropenia risk stratification was conducted and risk model performance was assessed using calibration and discrimination. RESULTS: Chemotherapy treatment data electronically extracted from the EHR were verified by chart review. The neutropenia risk prediction tool classified 126 patients (57%) as being low risk for febrile neutropenia, 44 (20%) as intermediate risk, and 51 (23%) as high risk. The model was well calibrated (Hosmer-Lemeshow goodness-of-fit test = 0.24). Discrimination was adequate and slightly less than in the original internal validation (c-statistic 0.75 vs 0.81). CONCLUSION: Chemotherapy treatment data were electronically extracted from the EHR successfully. The individualized neutropenia risk prediction model performed well in our retrospective external cohort.

Duke Scholars

Published In

J Am Med Inform Assoc

DOI

EISSN

1527-974X

Publication Date

April 1, 2017

Volume

24

Issue

e1

Start / End Page

e129 / e135

Location

England

Related Subject Headings

  • Risk Assessment
  • Retrospective Studies
  • ROC Curve
  • Neutropenia
  • Neoplasms
  • Middle Aged
  • Medical Informatics
  • Male
  • Logistic Models
  • Information Storage and Retrieval
 

Citation

APA
Chicago
ICMJE
MLA
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Pawloski, P. A., Thomas, A. J., Kane, S., Vazquez-Benitez, G., Shapiro, G. R., & Lyman, G. H. (2017). Predicting neutropenia risk in patients with cancer using electronic data. J Am Med Inform Assoc, 24(e1), e129–e135. https://doi.org/10.1093/jamia/ocw131
Pawloski, Pamala A., Avis J. Thomas, Sheryl Kane, Gabriela Vazquez-Benitez, Gary R. Shapiro, and Gary H. Lyman. “Predicting neutropenia risk in patients with cancer using electronic data.J Am Med Inform Assoc 24, no. e1 (April 1, 2017): e129–35. https://doi.org/10.1093/jamia/ocw131.
Pawloski PA, Thomas AJ, Kane S, Vazquez-Benitez G, Shapiro GR, Lyman GH. Predicting neutropenia risk in patients with cancer using electronic data. J Am Med Inform Assoc. 2017 Apr 1;24(e1):e129–35.
Pawloski, Pamala A., et al. “Predicting neutropenia risk in patients with cancer using electronic data.J Am Med Inform Assoc, vol. 24, no. e1, Apr. 2017, pp. e129–35. Pubmed, doi:10.1093/jamia/ocw131.
Pawloski PA, Thomas AJ, Kane S, Vazquez-Benitez G, Shapiro GR, Lyman GH. Predicting neutropenia risk in patients with cancer using electronic data. J Am Med Inform Assoc. 2017 Apr 1;24(e1):e129–e135.
Journal cover image

Published In

J Am Med Inform Assoc

DOI

EISSN

1527-974X

Publication Date

April 1, 2017

Volume

24

Issue

e1

Start / End Page

e129 / e135

Location

England

Related Subject Headings

  • Risk Assessment
  • Retrospective Studies
  • ROC Curve
  • Neutropenia
  • Neoplasms
  • Middle Aged
  • Medical Informatics
  • Male
  • Logistic Models
  • Information Storage and Retrieval