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The CAP/ACMG CYCGH proficiency testing program: 10 years in review.

Publication ,  Journal Article
Akkari, Y; Conlin, L; DeAvila, D; Gardner, J-A; Halley, J; Raca, G; Toydemir, RM; Tsuchiya, K; Rehder, C; CAP/ACMG Cytogenetics Committee
Published in: Genet Med
July 2025

PURPOSE: The College of American Pathologists has offered proficiency testing (PT) for the detection of copy-number variations (CNV) in the constitutional setting (CYCGH) since 2008. We review and summarize data from the CYCGH PT program, including participant performance over time, changes made to the program, and ungraded challenges. METHODS: The PT challenges from 2011 through 2021 (22 total mailings) and changes to the program over time were reviewed. Laboratory enrollment and performance were assessed. RESULTS: Overall participation has increased over time, and laboratories have maintained a high level of proficiency. The major changes to the program have occurred twice during the time span examined. Reasons for challenges not meeting consensus were varied. The use of ungraded challenges was also discussed. CONCLUSION: The CYCGH PT program is challenging because it assesses both analytical performance and interpretation as a single analyte. The program has evolved over time to address the changes in the field of CNV detection. During this time, additional technologies with the ability to detect CNVs have emerged, and the possibility of developing a platform-agnostic CNV PT program is being explored.

Duke Scholars

Published In

Genet Med

DOI

EISSN

1530-0366

Publication Date

July 2025

Volume

27

Issue

7

Start / End Page

101445

Location

United States

Related Subject Headings

  • Laboratory Proficiency Testing
  • Humans
  • Genetics & Heredity
  • Genetic Testing
  • DNA Copy Number Variations
  • 3105 Genetics
  • 1103 Clinical Sciences
  • 0604 Genetics
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Akkari, Y., Conlin, L., DeAvila, D., Gardner, J.-A., Halley, J., Raca, G., … CAP/ACMG Cytogenetics Committee. (2025). The CAP/ACMG CYCGH proficiency testing program: 10 years in review. Genet Med, 27(7), 101445. https://doi.org/10.1016/j.gim.2025.101445
Akkari, Yassmine, Laura Conlin, Diana DeAvila, Juli-Anne Gardner, Jaimie Halley, Gordana Raca, Reha M. Toydemir, Karen Tsuchiya, Catherine Rehder, and CAP/ACMG Cytogenetics Committee. “The CAP/ACMG CYCGH proficiency testing program: 10 years in review.Genet Med 27, no. 7 (July 2025): 101445. https://doi.org/10.1016/j.gim.2025.101445.
Akkari Y, Conlin L, DeAvila D, Gardner J-A, Halley J, Raca G, et al. The CAP/ACMG CYCGH proficiency testing program: 10 years in review. Genet Med. 2025 Jul;27(7):101445.
Akkari, Yassmine, et al. “The CAP/ACMG CYCGH proficiency testing program: 10 years in review.Genet Med, vol. 27, no. 7, July 2025, p. 101445. Pubmed, doi:10.1016/j.gim.2025.101445.
Akkari Y, Conlin L, DeAvila D, Gardner J-A, Halley J, Raca G, Toydemir RM, Tsuchiya K, Rehder C, CAP/ACMG Cytogenetics Committee. The CAP/ACMG CYCGH proficiency testing program: 10 years in review. Genet Med. 2025 Jul;27(7):101445.

Published In

Genet Med

DOI

EISSN

1530-0366

Publication Date

July 2025

Volume

27

Issue

7

Start / End Page

101445

Location

United States

Related Subject Headings

  • Laboratory Proficiency Testing
  • Humans
  • Genetics & Heredity
  • Genetic Testing
  • DNA Copy Number Variations
  • 3105 Genetics
  • 1103 Clinical Sciences
  • 0604 Genetics