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An Informatics System for Breath-by-Breath Analysis of Large-Scale Multi-Modal Time-Series Data in Sleep Research

Publication ,  Conference
Li, Y; Hall, ME; Shotwell, MS; Xu, Y; Schwartz, AR; Zealear, D; Bellotto, S; Estes, KE; Wells, CL; Budnick, HA; Lindsell, CJ; Bao, S; Kent, DT
Published in: Progress in Biomedical Optics and Imaging Proceedings of SPIE
January 1, 2025

Sleep medicine involves handling large volumes of multi-modal time-series data that capture diverse biological signals. Analyzing these signals on a breath-by-breath basis is crucial for understanding intricate respiratory patterns, which yield valuable scientific insights and inform clinical decision-making. However, manual analysis of such data is labor-intensive and prone to error, and there's a shortage of easy-to-use analytical tool for processing data at scale. To address these challenges, we have developed a comprehensive informatics system that automates breathing cycle segmentation, feature engineering, recognition of specific respiratory patterns, and visualization of findings, using standard physiological signals from sleep studies. Our pipeline includes a deep learning model for identifying flow limitation - the definitive indicator of airway collapse with significant analytic and clinical implications. We evaluated this system using real-world patient data from 41 individuals undergoing drug-induced sleep endoscopy (DISE) procedures. The system has been deployed as a web-based platform with a graphical user interface (GUI). This intuitive application is anticipated to enhance the efficiency of breath-level sleep data analysis and expand its accessibility to a broader scientific community.

Duke Scholars

Published In

Progress in Biomedical Optics and Imaging Proceedings of SPIE

DOI

ISSN

1605-7422

Publication Date

January 1, 2025

Volume

13411
 

Citation

APA
Chicago
ICMJE
MLA
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Li, Y., Hall, M. E., Shotwell, M. S., Xu, Y., Schwartz, A. R., Zealear, D., … Kent, D. T. (2025). An Informatics System for Breath-by-Breath Analysis of Large-Scale Multi-Modal Time-Series Data in Sleep Research. In Progress in Biomedical Optics and Imaging Proceedings of SPIE (Vol. 13411). https://doi.org/10.1117/12.3049101
Li, Y., M. E. Hall, M. S. Shotwell, Y. Xu, A. R. Schwartz, D. Zealear, S. Bellotto, et al. “An Informatics System for Breath-by-Breath Analysis of Large-Scale Multi-Modal Time-Series Data in Sleep Research.” In Progress in Biomedical Optics and Imaging Proceedings of SPIE, Vol. 13411, 2025. https://doi.org/10.1117/12.3049101.
Li Y, Hall ME, Shotwell MS, Xu Y, Schwartz AR, Zealear D, et al. An Informatics System for Breath-by-Breath Analysis of Large-Scale Multi-Modal Time-Series Data in Sleep Research. In: Progress in Biomedical Optics and Imaging Proceedings of SPIE. 2025.
Li, Y., et al. “An Informatics System for Breath-by-Breath Analysis of Large-Scale Multi-Modal Time-Series Data in Sleep Research.” Progress in Biomedical Optics and Imaging Proceedings of SPIE, vol. 13411, 2025. Scopus, doi:10.1117/12.3049101.
Li Y, Hall ME, Shotwell MS, Xu Y, Schwartz AR, Zealear D, Bellotto S, Estes KE, Wells CL, Budnick HA, Lindsell CJ, Bao S, Kent DT. An Informatics System for Breath-by-Breath Analysis of Large-Scale Multi-Modal Time-Series Data in Sleep Research. Progress in Biomedical Optics and Imaging Proceedings of SPIE. 2025.

Published In

Progress in Biomedical Optics and Imaging Proceedings of SPIE

DOI

ISSN

1605-7422

Publication Date

January 1, 2025

Volume

13411