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Small phenolic inhibitors of PfATP6, a Plasmodium falciparum calcium ATPase, as prototype antimalarials.

Publication ,  Journal Article
Sobota, S; Devaraja, S; Chung, M; Arevalo, J; Martinez-Aguirre, J; Makeyenko, J; Kellen-Yuen, C; Eastman, S; Derbyshire, E; Saade, C; Paula, S ...
Published in: Bioorganic & medicinal chemistry
November 2025

Malaria, an infectious disease caused by Plasmodium parasites, continues to pose a serious global health problem. PfATP6, a calcium-transporting transmembrane protein present in Plasmodium falciparum, has been identified as a promising target for new antimalarial drugs, prompting searches for specific and potent inhibitors of this enzyme. Such compounds also have the potential of becoming novel research tools for the elucidation of the enzyme's physiological functions. However, only a few PfATP6 inhibitors are known to date and most of them suffer from limitations due to their high structural complexity, with high costs that restrict their availability. A notable exception is a group of structurally simple phenolic compounds that feature hydroquinone and naphthoquinone scaffolds. In order to assess the potential of this compound class as future antimalarials, we characterized a small library of these molecules in P. falciparum blood stage viability and PfATP6 activity inhibition assays. Several compounds were able to inhibit parasite growth, amongst them di-alkylated hydroquinones, a naphthoquinone disulfide, and hexachlorophene, a disinfectant. Some of the antiplasmodial compounds were also able to inhibit the activity of the purified enzyme, even though the correlation between these two properties was not absolute. The molecular interactions of active compounds with PfATP6 were analyzed by homology modeling, ligand docking, and molecular dynamics simulations, revealing a combination of hydrogen bonding and hydrophobic interactions as the main contributors to binding. The gained information constitutes a first step toward the future design of small-molecule PfATP6 inhibitors with improved properties.

Duke Scholars

Published In

Bioorganic & medicinal chemistry

DOI

EISSN

1464-3391

ISSN

0968-0896

Publication Date

November 2025

Volume

129

Start / End Page

118342

Related Subject Headings

  • Structure-Activity Relationship
  • Protozoan Proteins
  • Plasmodium falciparum
  • Phenols
  • Parasitic Sensitivity Tests
  • Molecular Structure
  • Molecular Docking Simulation
  • Medicinal & Biomolecular Chemistry
  • Hydroquinones
  • Humans
 

Citation

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Sobota, S., Devaraja, S., Chung, M., Arevalo, J., Martinez-Aguirre, J., Makeyenko, J., … Paula, S. (2025). Small phenolic inhibitors of PfATP6, a Plasmodium falciparum calcium ATPase, as prototype antimalarials. Bioorganic & Medicinal Chemistry, 129, 118342. https://doi.org/10.1016/j.bmc.2025.118342
Sobota, Sydni, Shiffany Devaraja, Matthew Chung, Justin Arevalo, Jonathan Martinez-Aguirre, Jastina Makeyenko, Cynthia Kellen-Yuen, et al. “Small phenolic inhibitors of PfATP6, a Plasmodium falciparum calcium ATPase, as prototype antimalarials.Bioorganic & Medicinal Chemistry 129 (November 2025): 118342. https://doi.org/10.1016/j.bmc.2025.118342.
Sobota S, Devaraja S, Chung M, Arevalo J, Martinez-Aguirre J, Makeyenko J, et al. Small phenolic inhibitors of PfATP6, a Plasmodium falciparum calcium ATPase, as prototype antimalarials. Bioorganic & medicinal chemistry. 2025 Nov;129:118342.
Sobota, Sydni, et al. “Small phenolic inhibitors of PfATP6, a Plasmodium falciparum calcium ATPase, as prototype antimalarials.Bioorganic & Medicinal Chemistry, vol. 129, Nov. 2025, p. 118342. Epmc, doi:10.1016/j.bmc.2025.118342.
Sobota S, Devaraja S, Chung M, Arevalo J, Martinez-Aguirre J, Makeyenko J, Kellen-Yuen C, Eastman S, Derbyshire E, Saade C, Dieudonné T, Paula S. Small phenolic inhibitors of PfATP6, a Plasmodium falciparum calcium ATPase, as prototype antimalarials. Bioorganic & medicinal chemistry. 2025 Nov;129:118342.
Journal cover image

Published In

Bioorganic & medicinal chemistry

DOI

EISSN

1464-3391

ISSN

0968-0896

Publication Date

November 2025

Volume

129

Start / End Page

118342

Related Subject Headings

  • Structure-Activity Relationship
  • Protozoan Proteins
  • Plasmodium falciparum
  • Phenols
  • Parasitic Sensitivity Tests
  • Molecular Structure
  • Molecular Docking Simulation
  • Medicinal & Biomolecular Chemistry
  • Hydroquinones
  • Humans