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Early genetic evolution of driver mutations in uveal melanoma.

Publication ,  Journal Article
Dollar, JJ; Decatur, CL; Weis, E; Schefler, AC; Materin, MA; Fuller, TS; Skalet, AH; Reichstein, DA; Kim, IK; Piggott, KD; Demirci, H; Tsai, T ...
Published in: Nat Commun
December 12, 2025

Uveal melanoma (UM) is an aggressive eye cancer that frequently results in metastatic death despite successful primary tumor treatment. Subclinical micrometastasis is thought to occur early, when tumors are small and difficult to distinguish from benign nevi. However, the early genetic evolution of UM is poorly understood, and biomarkers for malignant transformation are lacking. Here, we perform integrated genetic profiling of 1140 primary UMs, including 131 small tumors. A clinically available 15-gene expression profile (15-GEP) prospectively validated by our group is more accurate than driver mutations for predicting patient survival. Small tumors are significantly more likely to be in earlier stages of genetic evolution than larger tumors. Further, the 15-GEP support vector machine discriminant score predicts small tumors undergoing transformation from low-risk Class 1 to high-risk Class 2 profile. These results shed light on the early genetic evolution of UM and move us closer to a molecular definition of malignant transformation in this cancer type.

Duke Scholars

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

December 12, 2025

Volume

16

Issue

1

Start / End Page

11322

Location

England

Related Subject Headings

  • Uveal Neoplasms
  • Uveal Melanoma
  • Mutation
  • Middle Aged
  • Melanoma
  • Male
  • Humans
  • Gene Expression Regulation, Neoplastic
  • Gene Expression Profiling
  • Female
 

Citation

APA
Chicago
ICMJE
MLA
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Dollar, J. J., Decatur, C. L., Weis, E., Schefler, A. C., Materin, M. A., Fuller, T. S., … Harbour, J. W. (2025). Early genetic evolution of driver mutations in uveal melanoma. Nat Commun, 16(1), 11322. https://doi.org/10.1038/s41467-025-66428-x
Dollar, James J., Christina L. Decatur, Ezekiel Weis, Amy C. Schefler, Miguel A. Materin, Timothy S. Fuller, Alison H. Skalet, et al. “Early genetic evolution of driver mutations in uveal melanoma.Nat Commun 16, no. 1 (December 12, 2025): 11322. https://doi.org/10.1038/s41467-025-66428-x.
Dollar JJ, Decatur CL, Weis E, Schefler AC, Materin MA, Fuller TS, et al. Early genetic evolution of driver mutations in uveal melanoma. Nat Commun. 2025 Dec 12;16(1):11322.
Dollar, James J., et al. “Early genetic evolution of driver mutations in uveal melanoma.Nat Commun, vol. 16, no. 1, Dec. 2025, p. 11322. Pubmed, doi:10.1038/s41467-025-66428-x.
Dollar JJ, Decatur CL, Weis E, Schefler AC, Materin MA, Fuller TS, Skalet AH, Reichstein DA, Kim IK, Piggott KD, Demirci H, Aaberg TA, Mruthyunjaya P, Williams BK, Shildkrot E, Oliver SCN, Char DH, Capone A, Mason JO, Walter SD, Altaweel MM, Wells JR, Gombos DS, Duker JS, Hovland PG, Tsai T, Javid C, Durante MA, Covington KR, Zhang S, Correa ZM, Harbour JW. Early genetic evolution of driver mutations in uveal melanoma. Nat Commun. 2025 Dec 12;16(1):11322.

Published In

Nat Commun

DOI

EISSN

2041-1723

Publication Date

December 12, 2025

Volume

16

Issue

1

Start / End Page

11322

Location

England

Related Subject Headings

  • Uveal Neoplasms
  • Uveal Melanoma
  • Mutation
  • Middle Aged
  • Melanoma
  • Male
  • Humans
  • Gene Expression Regulation, Neoplastic
  • Gene Expression Profiling
  • Female