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Acoustically seeded fabrication of a DNA tesseract into a conductive wire.

Publication ,  Journal Article
Shiu, SC-C; DeLuca, M; Chui, WH; Zhang, P; Mo, X; Siu, RHP; Dong, E; Qu, S; Cheung, CCL; Kinghorn, AB; Whitehouse, WL; Cui, J; He, W; Li, J ...
Published in: Nucleic acids research
November 2025

Assembly of DNA nanostructures to sub-millimetre scales is expected to have significant potential for applications in materials science and medicine. One approach to control nanostructure growth is through using acoustic waves to create pressure nodes for clustering. Here, we report a facet-based underlying DNA nanostructure architecture with structural and stability characteristics ideal for acoustic patterning. The architecture comprises only 16 canonical DNA oligonucleotides which self-assemble to form a nested cube, inspired by the four-dimensional hypercube known as a "tesseract." Cryogenic electron microscopy (Cryo-EM) and atomic force microscopy (AFM) analysis revealed a fully formed tesseract structure with exceptional stiffness and a melting temperature of 84°C, significantly higher than other unmodified DNA nanostructures. The DNA tesseract nanostructures could be acoustically shaped into wires spanning over 500 µm, observed after deposition onto an interdigitated electrode (IDE). The wires were shown to be electrically conductive, highlighting unique prospects for application. Simplified bottom-up assembly of a small number of oligonucleotides into a relatively complex and structurally stable DNA nanostructure with characteristics ideal for modular assembly holds promise for applications across bioelectronics and other fields.

Duke Scholars

Published In

Nucleic acids research

DOI

EISSN

1362-4962

ISSN

0305-1048

Publication Date

November 2025

Volume

53

Issue

22

Start / End Page

gkaf1409

Related Subject Headings

  • Nucleic Acid Conformation
  • Nanotechnology
  • Nanostructures
  • Microscopy, Atomic Force
  • Electric Conductivity
  • Developmental Biology
  • DNA
  • Cryoelectron Microscopy
  • Acoustics
  • 41 Environmental sciences
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Shiu, S.-C., DeLuca, M., Chui, W. H., Zhang, P., Mo, X., Siu, R. H. P., … Tanner, J. A. (2025). Acoustically seeded fabrication of a DNA tesseract into a conductive wire. Nucleic Acids Research, 53(22), gkaf1409. https://doi.org/10.1093/nar/gkaf1409
Shiu, Simon Chi-Chin, Marcello DeLuca, Wai Hin Chui, Pingping Zhang, Xiaoyong Mo, Ryan Ho Ping Siu, Erqian Dong, et al. “Acoustically seeded fabrication of a DNA tesseract into a conductive wire.Nucleic Acids Research 53, no. 22 (November 2025): gkaf1409. https://doi.org/10.1093/nar/gkaf1409.
Shiu SC-C, DeLuca M, Chui WH, Zhang P, Mo X, Siu RHP, et al. Acoustically seeded fabrication of a DNA tesseract into a conductive wire. Nucleic acids research. 2025 Nov;53(22):gkaf1409.
Shiu, Simon Chi-Chin, et al. “Acoustically seeded fabrication of a DNA tesseract into a conductive wire.Nucleic Acids Research, vol. 53, no. 22, Nov. 2025, p. gkaf1409. Epmc, doi:10.1093/nar/gkaf1409.
Shiu SC-C, DeLuca M, Chui WH, Zhang P, Mo X, Siu RHP, Dong E, Qu S, Cheung CCL, Kinghorn AB, Whitehouse WL, Cui J, He W, Wang X-Y, Li J, Khan AG, von Torklus SH, Yu TF, Al-Jamal KT, Tse ECM, Arya G, Fang NX, Zhou K, Tanner JA. Acoustically seeded fabrication of a DNA tesseract into a conductive wire. Nucleic acids research. 2025 Nov;53(22):gkaf1409.
Journal cover image

Published In

Nucleic acids research

DOI

EISSN

1362-4962

ISSN

0305-1048

Publication Date

November 2025

Volume

53

Issue

22

Start / End Page

gkaf1409

Related Subject Headings

  • Nucleic Acid Conformation
  • Nanotechnology
  • Nanostructures
  • Microscopy, Atomic Force
  • Electric Conductivity
  • Developmental Biology
  • DNA
  • Cryoelectron Microscopy
  • Acoustics
  • 41 Environmental sciences