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A dual-color miniature endoscope for calcium imaging in behaving mice.

Journal articles  - Journal Article
Zhang, J; Hong, F; Kim, J; Bakhurin, K; Kim, N; Yin, HH
Published in: iScience
May 2026

Calcium imaging with miniature endoscopes has become an essential tool in neuroscience, but conventional miniscopes typically record signals from only a single calcium indicator. Here, we present a dual-color miniature endoscope (miniscope) that enables simultaneous calcium imaging from two neuronal populations using spectrally distinct genetically encoded indicators. In freely moving mice, we used this system to record activity from striatal neurons of the direct (dSPN) and indirect (iSPN) pathways. We showed that dSPNs were activated earlier than iSPNs during contraversive movements, with dSPNs preferentially active during acceleration and iSPNs during deceleration. During ipsiversive turns, however, this temporal relationship was reversed. These findings indicate that dSPNs and iSPNs are not concurrently active, but instead exhibit complementary, direction-dependent dynamics that govern movement velocity. Our dual-color miniscope provides a compact, cost-effective platform for simultaneous two-population imaging, offering new opportunities to study neural circuits in freely behaving animals.

Duke Scholars

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Published In

iScience

DOI

EISSN

2589-0042

ISSN

2589-0042

Publication Date

May 2026

Volume

29

Issue

5

Start / End Page

115514
 

Citation

APA
Chicago
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Zhang, J., Hong, F., Kim, J., Bakhurin, K., Kim, N., & Yin, H. H. (2026). A dual-color miniature endoscope for calcium imaging in behaving mice. IScience, 29(5), 115514. https://doi.org/10.1016/j.isci.2026.115514
Zhang, Jinyong, Feiyang Hong, Jiwon Kim, Konstantin Bakhurin, Namsoo Kim, and Henry H. Yin. “A dual-color miniature endoscope for calcium imaging in behaving mice.IScience 29, no. 5 (May 2026): 115514. https://doi.org/10.1016/j.isci.2026.115514.
Zhang J, Hong F, Kim J, Bakhurin K, Kim N, Yin HH. A dual-color miniature endoscope for calcium imaging in behaving mice. iScience. 2026 May;29(5):115514.
Zhang, Jinyong, et al. “A dual-color miniature endoscope for calcium imaging in behaving mice.IScience, vol. 29, no. 5, May 2026, p. 115514. Epmc, doi:10.1016/j.isci.2026.115514.
Zhang J, Hong F, Kim J, Bakhurin K, Kim N, Yin HH. A dual-color miniature endoscope for calcium imaging in behaving mice. iScience. 2026 May;29(5):115514.
Journal cover image

Published In

iScience

DOI

EISSN

2589-0042

ISSN

2589-0042

Publication Date

May 2026

Volume

29

Issue

5

Start / End Page

115514