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Bayesian semi-parametric ROC analysis.

Publication ,  Journal Article
Erkanli, A; Sung, M; Costello, EJ; Angold, A
Published in: Stat Med
November 30, 2006

This paper describes a semi-parametric Bayesian approach for estimating receiver operating characteristic (ROC) curves based on mixtures of Dirichlet process priors (MDP). We address difficulties in modelling the underlying distribution of screening scores due to non-normality that may lead to incorrect choices of diagnostic cut-offs and unreliable estimates of prevalence of the disease. MDP is a robust tool for modelling non-standard diagnostic distributions associated with imperfect classification of an underlying diseased population, for example, when a diagnostic test is not a gold standard. For posterior computations, we propose an efficient Gibbs sampling framework based on a finite-dimensional approximation to MDP. We show, using both simulated and real data sets, that MDP modelling for ROC curve estimation closely parallels the frequentist kernel density estimation (KDE) approach.

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Published In

Stat Med

DOI

ISSN

0277-6715

Publication Date

November 30, 2006

Volume

25

Issue

22

Start / End Page

3905 / 3928

Location

England

Related Subject Headings

  • Statistics & Probability
  • ROC Curve
  • Monte Carlo Method
  • Models, Statistical
  • Markov Chains
  • Humans
  • Diagnostic Tests, Routine
  • Depression
  • Computer Simulation
  • Child
 

Citation

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Erkanli, A., Sung, M., Costello, E. J., & Angold, A. (2006). Bayesian semi-parametric ROC analysis. Stat Med, 25(22), 3905–3928. https://doi.org/10.1002/sim.2496
Erkanli, Alaattin, Minje Sung, E Jane Costello, and Adrian Angold. “Bayesian semi-parametric ROC analysis.Stat Med 25, no. 22 (November 30, 2006): 3905–28. https://doi.org/10.1002/sim.2496.
Erkanli A, Sung M, Costello EJ, Angold A. Bayesian semi-parametric ROC analysis. Stat Med. 2006 Nov 30;25(22):3905–28.
Erkanli, Alaattin, et al. “Bayesian semi-parametric ROC analysis.Stat Med, vol. 25, no. 22, Nov. 2006, pp. 3905–28. Pubmed, doi:10.1002/sim.2496.
Erkanli A, Sung M, Costello EJ, Angold A. Bayesian semi-parametric ROC analysis. Stat Med. 2006 Nov 30;25(22):3905–3928.
Journal cover image

Published In

Stat Med

DOI

ISSN

0277-6715

Publication Date

November 30, 2006

Volume

25

Issue

22

Start / End Page

3905 / 3928

Location

England

Related Subject Headings

  • Statistics & Probability
  • ROC Curve
  • Monte Carlo Method
  • Models, Statistical
  • Markov Chains
  • Humans
  • Diagnostic Tests, Routine
  • Depression
  • Computer Simulation
  • Child