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Glycosylation site-specific analysis of HIV envelope proteins (JR-FL and CON-S) reveals major differences in glycosylation site occupancy, glycoform profiles, and antigenic epitopes' accessibility.

Publication ,  Journal Article
Go, EP; Irungu, J; Zhang, Y; Dalpathado, DS; Liao, H-X; Sutherland, LL; Alam, SM; Haynes, BF; Desaire, H
Published in: J Proteome Res
April 2008

The HIV-1 envelope (Env) is a key determinant in mediating viral entry and fusion to host cells and is a major target for HIV vaccine development. While Env is typically about 50% glycan by mass, glycosylation sites are known to evolve, with some glycosylation profiles presumably being more effective at facilitating neutralization escape than others. Thus, characterizing glycosylation patterns of Env and native virions and correlating glycosylation profiles with infectivity and Env immunogenicity are necessary first steps in designing effective immunogens. Herein, we describe a mass spectrometry-based strategy to determine HIV-1 Env glycosylation patterns and have compared two mammalian cell expressed recombinant Env immunogens, one a limited immunogen and one that induces cross-clade neutralizing antibodies. We have used a glycopeptide-based mass mapping approach to identify and characterize Env's glycosylation patterns by elucidating which sites are utilized and what type of glycan motif is present at each glycosylation site. Our results show that the immunogens displayed different degrees of glycosylation as well as a different characteristic set of glycan motifs. Thus, these techniques can be used to (1) define glycosylation profiles of recombinant Env proteins and Env on mature virions, (2) define specific carbohydrate moieties at each glycosylation site, and (3) determine the role of certain carbohydrates in HIV-1 infectivity and in modulation of Env immunogenicity.

Duke Scholars

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Published In

J Proteome Res

DOI

ISSN

1535-3893

Publication Date

April 2008

Volume

7

Issue

4

Start / End Page

1660 / 1674

Location

United States

Related Subject Headings

  • Trypsin
  • Tandem Mass Spectrometry
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Spectrometry, Mass, Electrospray Ionization
  • Recombinant Proteins
  • Oligosaccharides, Branched-Chain
  • Molecular Structure
  • Molecular Sequence Data
  • Humans
  • HIV Envelope Protein gp160
 

Citation

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MLA
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Go, E. P., Irungu, J., Zhang, Y., Dalpathado, D. S., Liao, H.-X., Sutherland, L. L., … Desaire, H. (2008). Glycosylation site-specific analysis of HIV envelope proteins (JR-FL and CON-S) reveals major differences in glycosylation site occupancy, glycoform profiles, and antigenic epitopes' accessibility. J Proteome Res, 7(4), 1660–1674. https://doi.org/10.1021/pr7006957
Go, Eden P., Janet Irungu, Ying Zhang, Dilusha S. Dalpathado, Hua-Xin Liao, Laura L. Sutherland, S Munir Alam, Barton F. Haynes, and Heather Desaire. “Glycosylation site-specific analysis of HIV envelope proteins (JR-FL and CON-S) reveals major differences in glycosylation site occupancy, glycoform profiles, and antigenic epitopes' accessibility.J Proteome Res 7, no. 4 (April 2008): 1660–74. https://doi.org/10.1021/pr7006957.
Go EP, Irungu J, Zhang Y, Dalpathado DS, Liao H-X, Sutherland LL, Alam SM, Haynes BF, Desaire H. Glycosylation site-specific analysis of HIV envelope proteins (JR-FL and CON-S) reveals major differences in glycosylation site occupancy, glycoform profiles, and antigenic epitopes' accessibility. J Proteome Res. 2008 Apr;7(4):1660–1674.
Journal cover image

Published In

J Proteome Res

DOI

ISSN

1535-3893

Publication Date

April 2008

Volume

7

Issue

4

Start / End Page

1660 / 1674

Location

United States

Related Subject Headings

  • Trypsin
  • Tandem Mass Spectrometry
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
  • Spectrometry, Mass, Electrospray Ionization
  • Recombinant Proteins
  • Oligosaccharides, Branched-Chain
  • Molecular Structure
  • Molecular Sequence Data
  • Humans
  • HIV Envelope Protein gp160