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Fast and forceful refolding of stretched alpha-helical solenoid proteins.

Publication ,  Journal Article
Kim, M; Abdi, K; Lee, G; Rabbi, M; Lee, W; Yang, M; Schofield, CJ; Bennett, V; Marszalek, PE
Published in: Biophys J
June 16, 2010

Anfinsen's thermodynamic hypothesis implies that proteins can encode for stretching through reversible loss of structure. However, large in vitro extensions of proteins that occur through a progressive unfolding of their domains typically dissipate a significant amount of energy, and therefore are not thermodynamically reversible. Some coiled-coil proteins have been found to stretch nearly reversibly, although their extension is typically limited to 2.5 times their folded length. Here, we report investigations on the mechanical properties of individual molecules of ankyrin-R, beta-catenin, and clathrin, which are representative examples of over 800 predicted human proteins composed of tightly packed alpha-helical repeats (termed ANK, ARM, or HEAT repeats, respectively) that form spiral-shaped protein domains. Using atomic force spectroscopy, we find that these polypeptides possess unprecedented stretch ratios on the order of 10-15, exceeding that of other proteins studied so far, and their extension and relaxation occurs with minimal energy dissipation. Their sequence-encoded elasticity is governed by stepwise unfolding of small repeats, which upon relaxation of the stretching force rapidly and forcefully refold, minimizing the hysteresis between the stretching and relaxing parts of the cycle. Thus, we identify a new class of proteins that behave as highly reversible nanosprings that have the potential to function as mechanosensors in cells and as building blocks in springy nanostructures. Our physical view of the protein component of cells as being comprised of predominantly inextensible structural elements under tension may need revision to incorporate springs.

Duke Scholars

Published In

Biophys J

DOI

EISSN

1542-0086

Publication Date

June 16, 2010

Volume

98

Issue

12

Start / End Page

3086 / 3092

Location

United States

Related Subject Headings

  • Thermodynamics
  • Proteins
  • Protein Structure, Secondary
  • Protein Renaturation
  • Protein Folding
  • Protein Denaturation
  • Peptides
  • Models, Molecular
  • Microscopy, Atomic Force
  • Kinetics
 

Citation

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MLA
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Kim, M., Abdi, K., Lee, G., Rabbi, M., Lee, W., Yang, M., … Marszalek, P. E. (2010). Fast and forceful refolding of stretched alpha-helical solenoid proteins. Biophys J, 98(12), 3086–3092. https://doi.org/10.1016/j.bpj.2010.02.054
Kim, Minkyu, Khadar Abdi, Gwangrog Lee, Mahir Rabbi, Whasil Lee, Ming Yang, Christopher J. Schofield, Vann Bennett, and Piotr E. Marszalek. “Fast and forceful refolding of stretched alpha-helical solenoid proteins.Biophys J 98, no. 12 (June 16, 2010): 3086–92. https://doi.org/10.1016/j.bpj.2010.02.054.
Kim M, Abdi K, Lee G, Rabbi M, Lee W, Yang M, et al. Fast and forceful refolding of stretched alpha-helical solenoid proteins. Biophys J. 2010 Jun 16;98(12):3086–92.
Kim, Minkyu, et al. “Fast and forceful refolding of stretched alpha-helical solenoid proteins.Biophys J, vol. 98, no. 12, June 2010, pp. 3086–92. Pubmed, doi:10.1016/j.bpj.2010.02.054.
Kim M, Abdi K, Lee G, Rabbi M, Lee W, Yang M, Schofield CJ, Bennett V, Marszalek PE. Fast and forceful refolding of stretched alpha-helical solenoid proteins. Biophys J. 2010 Jun 16;98(12):3086–3092.
Journal cover image

Published In

Biophys J

DOI

EISSN

1542-0086

Publication Date

June 16, 2010

Volume

98

Issue

12

Start / End Page

3086 / 3092

Location

United States

Related Subject Headings

  • Thermodynamics
  • Proteins
  • Protein Structure, Secondary
  • Protein Renaturation
  • Protein Folding
  • Protein Denaturation
  • Peptides
  • Models, Molecular
  • Microscopy, Atomic Force
  • Kinetics