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Initiating a structural study of 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli.

Publication ,  Journal Article
Buchanan, LV; Mehta, N; Pocivavsek, L; Niranjanakumari, S; Toone, EJ; Naismith, JH
Published in: Acta crystallographica. Section D, Biological crystallography
November 1999

2-Keto-3-deoxy-6-phosphogluconate aldolase (KDPG aldolase, E.C. 4.1. 2.14) is a member of the pyruvate/phosphoenolpyruvate aldolase family. It is also a synthetically useful enzyme, capable of catalyzing the stereoselective aldol addition of pyruvate to a range of unnatural electrophilic substrates. The recombinant protein was purified by a two-step HPLC protocol involving anion-exchange and hydrophobic chromatography. Dynamic light-scattering experiments indicated the protein to be monodisperse. Crystals were obtained using the sitting-drop vapour-diffusion method, with PEG 6K as precipitant. Diffraction data were collected on a frozen crystal to a resolution of 2.26 A on station PX9.6 at the Daresbury synchrotron. The crystal belongs to space group P2(1)2(1)2(1), with unit-cell parameters a = 53.2, b = 77.9, c = 146.8 A.

Duke Scholars

Published In

Acta crystallographica. Section D, Biological crystallography

DOI

EISSN

1399-0047

ISSN

0907-4449

Publication Date

November 1999

Volume

55

Issue

Pt 11

Start / End Page

1946 / 1948

Related Subject Headings

  • X-Ray Diffraction
  • Sequence Homology, Amino Acid
  • Selenomethionine
  • Scattering, Radiation
  • Recombinant Proteins
  • Pseudomonas putida
  • Protein Conformation
  • Polyethylene Glycols
  • Molecular Sequence Data
  • Escherichia coli
 

Citation

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Buchanan, L. V., Mehta, N., Pocivavsek, L., Niranjanakumari, S., Toone, E. J., & Naismith, J. H. (1999). Initiating a structural study of 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli. Acta Crystallographica. Section D, Biological Crystallography, 55(Pt 11), 1946–1948. https://doi.org/10.1107/s0907444999011166
Buchanan, L. V., N. Mehta, L. Pocivavsek, S. Niranjanakumari, E. J. Toone, and J. H. Naismith. “Initiating a structural study of 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli.Acta Crystallographica. Section D, Biological Crystallography 55, no. Pt 11 (November 1999): 1946–48. https://doi.org/10.1107/s0907444999011166.
Buchanan LV, Mehta N, Pocivavsek L, Niranjanakumari S, Toone EJ, Naismith JH. Initiating a structural study of 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli. Acta crystallographica Section D, Biological crystallography. 1999 Nov;55(Pt 11):1946–8.
Buchanan, L. V., et al. “Initiating a structural study of 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli.Acta Crystallographica. Section D, Biological Crystallography, vol. 55, no. Pt 11, Nov. 1999, pp. 1946–48. Epmc, doi:10.1107/s0907444999011166.
Buchanan LV, Mehta N, Pocivavsek L, Niranjanakumari S, Toone EJ, Naismith JH. Initiating a structural study of 2-keto-3-deoxy-6-phosphogluconate aldolase from Escherichia coli. Acta crystallographica Section D, Biological crystallography. 1999 Nov;55(Pt 11):1946–1948.
Journal cover image

Published In

Acta crystallographica. Section D, Biological crystallography

DOI

EISSN

1399-0047

ISSN

0907-4449

Publication Date

November 1999

Volume

55

Issue

Pt 11

Start / End Page

1946 / 1948

Related Subject Headings

  • X-Ray Diffraction
  • Sequence Homology, Amino Acid
  • Selenomethionine
  • Scattering, Radiation
  • Recombinant Proteins
  • Pseudomonas putida
  • Protein Conformation
  • Polyethylene Glycols
  • Molecular Sequence Data
  • Escherichia coli